Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g31390.1
CDS Infomation

gene=Cs5g31390
Sequence

ATGATTTTTAAACTAGAAGATGTGACAGTGTATTTCCCATACGACAACATCTACCCGGAA
CAATACTCGTACATGCTGGAACTCAAACGAGCCCTCGACGCCAAAGGGCACTGCCTCCTC
GAGATGCCTACCGGCACCGGCAAGACCATCGCCCTCCTCTCTCTAATTACTAGCTACGTT
CTTTCCAAACCGGAGAACCCTGTCAAGCTCATTTACTGCACGCGCACCGTTCACGAGATG
GAGAAAACTTTGGCCGAGTTGAAGTTGTTACATAACTACCAGACTCGCCATCTGGGACCC
GCCGCCAAGATCCTCGCCATCGGGCTGTCGTCGAGGAAGAATCTTTGTGTCAATTCTAGG
GTTTTGGCCGCGGAGAATCGGGATTCCGTTGATGCCGCCTGTAGAAAAAGGACTGCCAGC
TGGGTTCGTGCGTTGGCTGCTGAGAACCCTAATATTGAGACCTGTGAGTTCTTTGAGAAC
TACGAGAAGGCGGCTTCCGCCGCGGTCTTGCCTCCTGGGGTTTATACGTTGCAGGATTTG
AGGGCATTTGGTAAGCAACAAGGGTGGTGCCCGTACTTCTTGGCGAGGCACATGGTGCAA
TTTGCAAATGTGGTGGTTTATAGTTATCAGTACTTGCTTGATCCCAAGGTGGCTGGGATT
ATATCAAAAGAAATGCAAAAGGAGTCCGTTGTGGTATTTGATGAGGCACATAATATTGAT
AATGTGTGTATTGAAGCACTTAGTGTTAGTGTGCGGAGACAAACACTGGAAGGGGCCACC
AGGAACCTTAGTAGGATAAATCAGGAGATTGAAAGGTTTAAGGCTACGGATGCGGGTAGA
TTACGTGCTGAATACAACCGGCTCGTTGAGGGTTTGGCACTAAGAGGAAACCTACCAATT
GCAGATGCCTGGCTTTCAAATCCTGCCTTGCCTAGTGATATTCTGAAGGAGGCTGTGCCT
GGAAACATTCGCAGAGCTGAGCATTTTCTGCATGTTTTGCGTAGATTGGTCCAATATCTT
AGAGGGCGCCTGGAGACTGAAAATGTTGAGAAGGAAGGCCCTGTGAGCTTCGTTGCCTCT
ATTACTGCACATGCTGGAATTGATCAGAAAACGCTGAGGTTTTGTTACGAACGCCTGCAT
TCTCTCATGTTGACACTAGAAATAACTGACACGGATGAGTTCTTACATATCCAGACAATT
TGTGACTTCGCAACACTTGTGGGAACGTATACTCGTGGGTTTTCAATTATAATTGAACCT
TTTGATGAGAGAATGCCACACATTCCTGATCCTGTTCTGCAGCTTAGCTGCCATGATGCT
TCACTTGCCGTAAAGCCTGTATTTGACCGGTTCCAGTCAGTTGTTATTACATCCGGAACT
TTGAGCCCAATTGATCTCTATCCCCGTCTTCTTAATTTCCATCCAGTTGTAAGTCGGAGT
TTTAAGATGTCCCTGACAAGAGATTGCATATGTCCAATGGTTCTAACTCGAGGAAGTGAC
CAACTTCCAGTGAGTACCAAATTTGATATGAGAAGTGATCCTGGTGTAGCAAGGAATTAC
GGAAAGCTCTTGGTAGAGATGGTCTCCATTGTCCCTGATGGGATTGTATGTTTTTTTGTC
AGTTACTCGTACATGGATGAAATAATTGCCACTTGGAATGATAGTGGAATCCTAAAGGAA
ATAATGCAGCATAAGCTTGTGTTCATTGAGACGCAGGACGTAGTAGAAACTACATTGGCT
CTGGACAACTATCGTAAGGCATGTGACTGTGGTAGAGGTGCAGTTTTTTTCTCTGTTGCC
AGGGGAAAAGTAGCTGAAGGTATAGATTTTGACCGGCATTATGGCAGACTAGTCATCATG
TTTGGCGTTCCTTTCCAATACACATTAAGCAAAATCTTGCTTGCGCGGTTGGAGTATTTA
CGGGATACATTTCAGATAAAGGAAGGCGATTTTCTAACATTTGATGCCTTGAGACAAGCT
GCTCAGTGTGTGGGCCGAGTTATCCGTTCAAAGGCTGATTATGGGATGATGATATTTGCT
GACAAAAGGTATAGCCGTCATGACAAGCGCTCTAAGTTGCCTGGTTGGATATTGTCACAT
CTTCGTGATGCACATCTGAATTTGAGCACTGATATGGCCTTGCATATAGCTCGAGAGTTT
CTGCGGAAAATGGCTCAACCTTATGATAAAGCTGGTAGCATTGGGAGGAAAACACTCTTG
TCCCAAGCTGACTTGGAGAAGATGACCAATGATGGCAGCATAAATGAAATGTTGTATTGA

Peptide Sequence

PEP ID

Cs5g31390.1
PEP Infomation
Sequence

MIFKLEDVTVYFPYDNIYPEQYSYMLELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV
LSKPENPVKLIYCTRTVHEMEKTLAELKLLHNYQTRHLGPAAKILAIGLSSRKNLCVNSR
VLAAENRDSVDAACRKRTASWVRALAAENPNIETCEFFENYEKAASAAVLPPGVYTLQDL
RAFGKQQGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQKESVVVFDEAHNID
NVCIEALSVSVRRQTLEGATRNLSRINQEIERFKATDAGRLRAEYNRLVEGLALRGNLPI
ADAWLSNPALPSDILKEAVPGNIRRAEHFLHVLRRLVQYLRGRLETENVEKEGPVSFVAS
ITAHAGIDQKTLRFCYERLHSLMLTLEITDTDEFLHIQTICDFATLVGTYTRGFSIIIEP
FDERMPHIPDPVLQLSCHDASLAVKPVFDRFQSVVITSGTLSPIDLYPRLLNFHPVVSRS
FKMSLTRDCICPMVLTRGSDQLPVSTKFDMRSDPGVARNYGKLLVEMVSIVPDGIVCFFV
SYSYMDEIIATWNDSGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSKILLARLEYLRDTFQIKEGDFLTFDALRQA
AQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMALHIAREF
LRKMAQPYDKAGSIGRKTLLSQADLEKMTNDGSINEMLY*

Transcript Sequence

Transcript ID

Cs5g31390.1
Transcript Infomation

gene=Cs5g31390 CDS=181-2460
Sequence

GTCCTGTGTTTAAACGTTCCCCGTTGGTGTAGGTCATTCGTCAAAGAAGGGAAAATCAAC
TCCCTCCCCGTAGCTGAAAAGTTCAAACTTAACCCCACTGAAAAACCCCCCCGAAGCGTC
AAGTGATCAGCTATTCAGCTCCAGTTCCAGTTCCAGTTCAGCGTGTCGAGTCTGAACACC
ATGATTTTTAAACTAGAAGATGTGACAGTGTATTTCCCATACGACAACATCTACCCGGAA
CAATACTCGTACATGCTGGAACTCAAACGAGCCCTCGACGCCAAAGGGCACTGCCTCCTC
GAGATGCCTACCGGCACCGGCAAGACCATCGCCCTCCTCTCTCTAATTACTAGCTACGTT
CTTTCCAAACCGGAGAACCCTGTCAAGCTCATTTACTGCACGCGCACCGTTCACGAGATG
GAGAAAACTTTGGCCGAGTTGAAGTTGTTACATAACTACCAGACTCGCCATCTGGGACCC
GCCGCCAAGATCCTCGCCATCGGGCTGTCGTCGAGGAAGAATCTTTGTGTCAATTCTAGG
GTTTTGGCCGCGGAGAATCGGGATTCCGTTGATGCCGCCTGTAGAAAAAGGACTGCCAGC
TGGGTTCGTGCGTTGGCTGCTGAGAACCCTAATATTGAGACCTGTGAGTTCTTTGAGAAC
TACGAGAAGGCGGCTTCCGCCGCGGTCTTGCCTCCTGGGGTTTATACGTTGCAGGATTTG
AGGGCATTTGGTAAGCAACAAGGGTGGTGCCCGTACTTCTTGGCGAGGCACATGGTGCAA
TTTGCAAATGTGGTGGTTTATAGTTATCAGTACTTGCTTGATCCCAAGGTGGCTGGGATT
ATATCAAAAGAAATGCAAAAGGAGTCCGTTGTGGTATTTGATGAGGCACATAATATTGAT
AATGTGTGTATTGAAGCACTTAGTGTTAGTGTGCGGAGACAAACACTGGAAGGGGCCACC
AGGAACCTTAGTAGGATAAATCAGGAGATTGAAAGGTTTAAGGCTACGGATGCGGGTAGA
TTACGTGCTGAATACAACCGGCTCGTTGAGGGTTTGGCACTAAGAGGAAACCTACCAATT
GCAGATGCCTGGCTTTCAAATCCTGCCTTGCCTAGTGATATTCTGAAGGAGGCTGTGCCT
GGAAACATTCGCAGAGCTGAGCATTTTCTGCATGTTTTGCGTAGATTGGTCCAATATCTT
AGAGGGCGCCTGGAGACTGAAAATGTTGAGAAGGAAGGCCCTGTGAGCTTCGTTGCCTCT
ATTACTGCACATGCTGGAATTGATCAGAAAACGCTGAGGTTTTGTTACGAACGCCTGCAT
TCTCTCATGTTGACACTAGAAATAACTGACACGGATGAGTTCTTACATATCCAGACAATT
TGTGACTTCGCAACACTTGTGGGAACGTATACTCGTGGGTTTTCAATTATAATTGAACCT
TTTGATGAGAGAATGCCACACATTCCTGATCCTGTTCTGCAGCTTAGCTGCCATGATGCT
TCACTTGCCGTAAAGCCTGTATTTGACCGGTTCCAGTCAGTTGTTATTACATCCGGAACT
TTGAGCCCAATTGATCTCTATCCCCGTCTTCTTAATTTCCATCCAGTTGTAAGTCGGAGT
TTTAAGATGTCCCTGACAAGAGATTGCATATGTCCAATGGTTCTAACTCGAGGAAGTGAC
CAACTTCCAGTGAGTACCAAATTTGATATGAGAAGTGATCCTGGTGTAGCAAGGAATTAC
GGAAAGCTCTTGGTAGAGATGGTCTCCATTGTCCCTGATGGGATTGTATGTTTTTTTGTC
AGTTACTCGTACATGGATGAAATAATTGCCACTTGGAATGATAGTGGAATCCTAAAGGAA
ATAATGCAGCATAAGCTTGTGTTCATTGAGACGCAGGACGTAGTAGAAACTACATTGGCT
CTGGACAACTATCGTAAGGCATGTGACTGTGGTAGAGGTGCAGTTTTTTTCTCTGTTGCC
AGGGGAAAAGTAGCTGAAGGTATAGATTTTGACCGGCATTATGGCAGACTAGTCATCATG
TTTGGCGTTCCTTTCCAATACACATTAAGCAAAATCTTGCTTGCGCGGTTGGAGTATTTA
CGGGATACATTTCAGATAAAGGAAGGCGATTTTCTAACATTTGATGCCTTGAGACAAGCT
GCTCAGTGTGTGGGCCGAGTTATCCGTTCAAAGGCTGATTATGGGATGATGATATTTGCT
GACAAAAGGTATAGCCGTCATGACAAGCGCTCTAAGTTGCCTGGTTGGATATTGTCACAT
CTTCGTGATGCACATCTGAATTTGAGCACTGATATGGCCTTGCATATAGCTCGAGAGTTT
CTGCGGAAAATGGCTCAACCTTATGATAAAGCTGGTAGCATTGGGAGGAAAACACTCTTG
TCCCAAGCTGACTTGGAGAAGATGACCAATGATGGCAGCATAAATGAAATGTTGTATTGA
GTATTTATGCTGCTTATTTATAGATCTAGTGCAAGTGGTCTGTGCATCAATCTGTTTCTA
CTGATTTTCATCTGCTGGCAGTAAGGTGGATGGATGATTAATAAGGTTTTAATTTTTGTA
CATCGGTGATTTGAGTAGTAGCTCCGTGTTAAAGCCTGAGGGACCATTTGATAGGAGTCA
ACGCCCTGCGGGATTTACAACAAAGGATTTTTTTTCCTTTTTTAAATAGCTGTAGGGCTA
TCAAAGATTTGTACTCGTATTCAGGCTCTCGCCTTGATCCCACCAGTAGCTTTACTGAAA
ATGTGTATCAAAATGTGAAGTTTTTGTTCTTAGTGTCTCTTGACTGTTATTTGAGAAAAG
GAGATCAATCAATGATTCGATGTTGCGTCAA