Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g31370.2
CDS Infomation

gene=Cs5g31370
Sequence

ATGGAAGCAACTCTGCTTAGCTCCCATCACTTCACTCCTCAACTCTTCACGACAACACCC
GTAAAACTCGGAGGCGGACATGTACTCGCTGATAACCGATTTTGTCATCCATTATGTACC
AAGACCTTTGTTTCGGTCAGGTTGAGTTTATTGGATTCCAAAAGAAGGCAAGTTCCGTTG
CTAAATAGGCCTTTTCTTTCAAGGGCAAACAAACGGTATTCTGTCTATTCTTCTGACCAA
CTTCGAAGTGACTACGTGAATGTTGAGGCATCATCTGCACTGTCGGTAAACCTTGAAGCT
GTTCCACCCAGATTGGATGATGAGGTAGATAGTCAAGGTTTGCGTGATGTCACTGACAAT
GAGACTTTCAGGTCAAAACCTAAGATGTATAAAAACAGGTTCCTGAATTTTATACGACTA
AGCTCTGTCCTTAATAATGCTGCGGAATCATTTTTTAAGAGTGAGATACGGCGGAGGTTA
TTTGTGACTGCTGTACTGATTGTTATAAGTCGCATTGGGTATTTCATTCCTCTTCCTGGA
TTTGATAGAAGGTTGATACCTCAAGATTACCTTAGCTTTGTTTCAGGATCTGTTGATGAA
CTCGGTGATTTTGGAGCAGAGCTCAAACTATCCTTTTTTCAGCTCGGAATAAGCCCCCAG
ATAGTAGCATCAATTCTAATGCAGGTGCTCTGTCATATTGTTCCATCCTTGGTACAGCTG
AGAAAGGAAGGCTTAGATGGACACGAGAAGATTAAGAGTTATATATGGTGGATTTCACTT
GGGTTTGCAATACTTGAAGCTGTCATAGTTGCTTGTTATTCACTTCCGTACTCAATATAT
GCTGCCAGTCACAGTGTCAAGCATGTAATGGTGACTGCCTTCCTGTTGGTTTGTGGTGCA
ATGACAATGTCATGGATTTGTGATACGATATCAGAATCTGGATTTGGTCAAGGTTCATCA
TTGATTATATGTGTGGGAATATTGACGGGTTACACTGAAACATTGTACAAGATGTTGTCT
CAGCTGTTAGGAAGTTCTGTGAGATGGTGGCCATTTATGCTTGGACTGTTAGGAGTTTTT
ACCATTGTTACTATGTGGGCAGTTGTTGTGACTGAAGGTTGCAGGAAAGTAAAACTGCAG
TATTATGGATTTAAACTTGCTTCTGCTGCACGAGAAGATTCTCCAATTACGGAAGTCGAA
CCATATATTCCTTTTAATATCAATCCATCAGGAATGCAGCCCGTTCTTACAACAACTTAT
CTCTTGGCATTTCCTAGTATTCTTGCAAGTATACTTGGTTCACCTTTCTGGCAGCATGTT
AAGGAGATATTGAACCCTGAAACTTCTGTTGGTGCACGGCCATGGGTTTACTATACTATT
TATGCTTTTTTCGTCTTCTTGTTCAATATATTTGACATTGCCAACTTGCCCAAGGAAATA
GCAGATTACTTAAATAAGATGGGAGCCAGAATACCAAATGTAAAACCTGGAAAGGCTACC
ATTGAATACCTCACAAAGATTCAGGCATCAACACGTTTTTGGGGGGGCTTATTATTAAGT
ATTTTGGCAACTTCATCAACCATACTGGATCACTACTTGCGCCGCATCAATGAGGGATTT
TCAATTGGATTTACATCGGTTTTAATTATTGTGGGCTCCATTATTGAACTTAGAAGATCC
TATCAAGCATACAACGTTATGCCCAGTTTAAGCAAAGCTCTAAGGCGGTATGGTGTATGA

Peptide Sequence

PEP ID

Cs5g31370.2
PEP Infomation
Sequence

MEATLLSSHHFTPQLFTTTPVKLGGGHVLADNRFCHPLCTKTFVSVRLSLLDSKRRQVPL
LNRPFLSRANKRYSVYSSDQLRSDYVNVEASSALSVNLEAVPPRLDDEVDSQGLRDVTDN
ETFRSKPKMYKNRFLNFIRLSSVLNNAAESFFKSEIRRRLFVTAVLIVISRIGYFIPLPG
FDRRLIPQDYLSFVSGSVDELGDFGAELKLSFFQLGISPQIVASILMQVLCHIVPSLVQL
RKEGLDGHEKIKSYIWWISLGFAILEAVIVACYSLPYSIYAASHSVKHVMVTAFLLVCGA
MTMSWICDTISESGFGQGSSLIICVGILTGYTETLYKMLSQLLGSSVRWWPFMLGLLGVF
TIVTMWAVVVTEGCRKVKLQYYGFKLASAAREDSPITEVEPYIPFNINPSGMQPVLTTTY
LLAFPSILASILGSPFWQHVKEILNPETSVGARPWVYYTIYAFFVFLFNIFDIANLPKEI
ADYLNKMGARIPNVKPGKATIEYLTKIQASTRFWGGLLLSILATSSTILDHYLRRINEGF
SIGFTSVLIIVGSIIELRRSYQAYNVMPSLSKALRRYGV*

Transcript Sequence

Transcript ID

Cs5g31370.2
Transcript Infomation

gene=Cs5g31370 CDS=64-1803
Sequence

TAAAACCCAAGTCCAAAAGGTAGAGGCCTTTGTTTTGCCGCTCCATTGAGCCGAAGTCTC
GCCATGGAAGCAACTCTGCTTAGCTCCCATCACTTCACTCCTCAACTCTTCACGACAACA
CCCGTAAAACTCGGAGGCGGACATGTACTCGCTGATAACCGATTTTGTCATCCATTATGT
ACCAAGACCTTTGTTTCGGTCAGGTTGAGTTTATTGGATTCCAAAAGAAGGCAAGTTCCG
TTGCTAAATAGGCCTTTTCTTTCAAGGGCAAACAAACGGTATTCTGTCTATTCTTCTGAC
CAACTTCGAAGTGACTACGTGAATGTTGAGGCATCATCTGCACTGTCGGTAAACCTTGAA
GCTGTTCCACCCAGATTGGATGATGAGGTAGATAGTCAAGGTTTGCGTGATGTCACTGAC
AATGAGACTTTCAGGTCAAAACCTAAGATGTATAAAAACAGGTTCCTGAATTTTATACGA
CTAAGCTCTGTCCTTAATAATGCTGCGGAATCATTTTTTAAGAGTGAGATACGGCGGAGG
TTATTTGTGACTGCTGTACTGATTGTTATAAGTCGCATTGGGTATTTCATTCCTCTTCCT
GGATTTGATAGAAGGTTGATACCTCAAGATTACCTTAGCTTTGTTTCAGGATCTGTTGAT
GAACTCGGTGATTTTGGAGCAGAGCTCAAACTATCCTTTTTTCAGCTCGGAATAAGCCCC
CAGATAGTAGCATCAATTCTAATGCAGGTGCTCTGTCATATTGTTCCATCCTTGGTACAG
CTGAGAAAGGAAGGCTTAGATGGACACGAGAAGATTAAGAGTTATATATGGTGGATTTCA
CTTGGGTTTGCAATACTTGAAGCTGTCATAGTTGCTTGTTATTCACTTCCGTACTCAATA
TATGCTGCCAGTCACAGTGTCAAGCATGTAATGGTGACTGCCTTCCTGTTGGTTTGTGGT
GCAATGACAATGTCATGGATTTGTGATACGATATCAGAATCTGGATTTGGTCAAGGTTCA
TCATTGATTATATGTGTGGGAATATTGACGGGTTACACTGAAACATTGTACAAGATGTTG
TCTCAGCTGTTAGGAAGTTCTGTGAGATGGTGGCCATTTATGCTTGGACTGTTAGGAGTT
TTTACCATTGTTACTATGTGGGCAGTTGTTGTGACTGAAGGTTGCAGGAAAGTAAAACTG
CAGTATTATGGATTTAAACTTGCTTCTGCTGCACGAGAAGATTCTCCAATTACGGAAGTC
GAACCATATATTCCTTTTAATATCAATCCATCAGGAATGCAGCCCGTTCTTACAACAACT
TATCTCTTGGCATTTCCTAGTATTCTTGCAAGTATACTTGGTTCACCTTTCTGGCAGCAT
GTTAAGGAGATATTGAACCCTGAAACTTCTGTTGGTGCACGGCCATGGGTTTACTATACT
ATTTATGCTTTTTTCGTCTTCTTGTTCAATATATTTGACATTGCCAACTTGCCCAAGGAA
ATAGCAGATTACTTAAATAAGATGGGAGCCAGAATACCAAATGTAAAACCTGGAAAGGCT
ACCATTGAATACCTCACAAAGATTCAGGCATCAACACGTTTTTGGGGGGGCTTATTATTA
AGTATTTTGGCAACTTCATCAACCATACTGGATCACTACTTGCGCCGCATCAATGAGGGA
TTTTCAATTGGATTTACATCGGTTTTAATTATTGTGGGCTCCATTATTGAACTTAGAAGA
TCCTATCAAGCATACAACGTTATGCCCAGTTTAAGCAAAGCTCTAAGGCGGTATGGTGTA
TGATTTTTGAATATGCTATGCACTTTCCTTTTCCCAGGTATGACTTGAATGATCTTATA