Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g31340.1
CDS Infomation

gene=Cs5g31340
Sequence

ATGCCTGGTGGTTCAGGCTCCAGTAGCCGAACCGGCGTGAGAGTGGTGGTTGTTGGCGAT
CGAGGCACTGGAAAATCGAGTCTGATAGCGGCGGCCGCAACCGAGTCGGTCCCTGAGAAG
GTCCCACCGGTCCACGCTCCTACGCGCCTGCCGCCCGATTTTTATCCCGATCGTGTCCCC
GTCACTATCATTGACACCTCTTCCAGCTTGGAGAATAAAGGTAAGCTTAATGAAGAATTG
AAGCGAGCAGATGCTGTGGTGTTAACATATGCATGTAATCAGCAATCAACTCTTTCTCGT
TTGAGTTCCTATTGGCTCCCAGAGCTTCGTCGTTTAGAGATTAAGGTGCCCATAATTGTA
GCTGGGTGTAAGCTAGATCTGCGCGGTGATCATAATGCCACAAGCCTCGAGGAGGTTATG
GGACCAATCATGCAACAGTTCAGGGAGATTGAAACTTGTGTAGAATGTTCTGCAACTACT
ATGATTCAGGTCCCTGATGTTTTCTATTATGCTCAAAAAGCAGTACTTCATCCAACAGCT
CCATTGTTTGATCACGATGAACAAACTTTGAAACCTCGGTGCGTCAGGGCATTGAAAAGG
ATATTTATTATCTGTGATCATGACATGGACGGTGCCCTAAATGATGCAGAGTTAAATGAG
TTTCAGGTTAAATGTTTTAATGCTCCATTACAGCCTGCTGAAATAGTAGGCGTAAAGAGG
GTTGTACAAGAGAAGCAGCATGATGGAGTCAATGACCTTGGTCTTACCCTTAGTGGTTTC
CTTTTCCTCCATGCTCTTTTCATTGAGAAAGGGCGTCTTGAAACTACATGGGCTGTTCTG
AGAAAATTTGGTTATGGGGATGATTTAGAACTGAGGGATGATTTTCTTCCGGTTCCAACT
AAGCTCTCTCCTGATCAGAGTGTGGAACTGGCAAGTGAAGCTGTGGAATTCCTACGTGGT
ATCTTCGGATTGTATGACATTGATAATGATGGAGCAGTGAGGCCTGCGGAGCTTGAGGAT
CTATTTTTAACTGCACCAGAAAGTCCGTGGGATGAAGCTCCATACAAGGATGCTGCAGAG
ACAACAGCACTGGGCAATTTAACACTCAAAGGTTTCGTGTCTAAGTGGGCTCTAATGACT
CTGCTTGACCCGCGACACAGTTTGGCAAATTTGATATACGTTGGATACGGTGGTGATCCT
GCTGCAGCACTCCGTGTTACTAGGAAAAGATCAGTAGATCGTAAGAAGCAACAAACTGAA
AGAAATGTTTTCCGTTGTCTCCTTTTTGGTCCACAAAATGCTGGAAAGTCTGCACTGTTG
AATTCATTCTTGGAAAGGCCATTCTCAGAAAATTATGCCCCAACAACCGGTGAGCAATAT
GCGGTGAATGTGGTTGACCAGCCTGGGGGAAATAAGAAGACTCTTATTCTGCAAGAAATA
CCAGAAGAAGGAGTGAAAAAAATCCTGTCCAACAAGGAAGCTTTGGCCAGCTGTGATGTT
ACCATATTTGTCTATGACAGCTCAGATGAATATTCATGGAAAAGAACAAAAGAACTTTTA
GTGGAGGTTGCCAGGCTAGGTGAAGACAGTGGTTATGGTGTTCCATGCCTGCTTATTGCA
TCAAAAGATGACCTGAAACCTTATACAATGGCAGTACAAGATTCAGCAAGGGTTACTCAG
GAGTTGGGAATAGAGCCCCCTATTCCTGTAAGCATGAAATCGAAAGATCTGAATAATGTA
TTTAGCAGAATTATATGGGCTGCTGAACACCCTCATTTGAACATTCCTGAAACTGAGACT
GGGAGGAACCGGAAGCGTTACCGCCACCTTGTTAATAGCTCACTTGTGTTTGTTTCTGTT
GGGGCTGCTGTTGCGGTCGTCGGACTGGCTGCTTATCGAGCCTATGCTGCAAGAAGGAAT
TCCTCTAGTTAG

Peptide Sequence

PEP ID

Cs5g31340.1
PEP Infomation
Sequence

MPGGSGSSSRTGVRVVVVGDRGTGKSSLIAAAATESVPEKVPPVHAPTRLPPDFYPDRVP
VTIIDTSSSLENKGKLNEELKRADAVVLTYACNQQSTLSRLSSYWLPELRRLEIKVPIIV
AGCKLDLRGDHNATSLEEVMGPIMQQFREIETCVECSATTMIQVPDVFYYAQKAVLHPTA
PLFDHDEQTLKPRCVRALKRIFIICDHDMDGALNDAELNEFQVKCFNAPLQPAEIVGVKR
VVQEKQHDGVNDLGLTLSGFLFLHALFIEKGRLETTWAVLRKFGYGDDLELRDDFLPVPT
KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAE
TTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDPAAALRVTRKRSVDRKKQQTE
RNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEI
PEEGVKKILSNKEALASCDVTIFVYDSSDEYSWKRTKELLVEVARLGEDSGYGVPCLLIA
SKDDLKPYTMAVQDSARVTQELGIEPPIPVSMKSKDLNNVFSRIIWAAEHPHLNIPETET
GRNRKRYRHLVNSSLVFVSVGAAVAVVGLAAYRAYAARRNSSS*

Transcript Sequence

Transcript ID

Cs5g31340.1
Transcript Infomation

gene=Cs5g31340 CDS=253-2184
Sequence

CGCAATCCGCCACAAAACTTCACAACTTGCTACCCACGAATTTGCGCCCCACCCAGCCAC
CCTCTCCCTCTCGCTCTCTCTCTCTCTCTCATGCTCACTCTCTCGCACTAAAAATCCGTT
TCAGGCCTTCACTAAATAAACAAACACTATTTATTTGCTCTCACCGATCTCATTAAAAGC
GGAAACCCCTCTTACTAATATTATTTTCCGTCTCGCTCTCTCTCTCTCTCCCTCATAATT
TAAAATAAATCAATGCCTGGTGGTTCAGGCTCCAGTAGCCGAACCGGCGTGAGAGTGGTG
GTTGTTGGCGATCGAGGCACTGGAAAATCGAGTCTGATAGCGGCGGCCGCAACCGAGTCG
GTCCCTGAGAAGGTCCCACCGGTCCACGCTCCTACGCGCCTGCCGCCCGATTTTTATCCC
GATCGTGTCCCCGTCACTATCATTGACACCTCTTCCAGCTTGGAGAATAAAGGTAAGCTT
AATGAAGAATTGAAGCGAGCAGATGCTGTGGTGTTAACATATGCATGTAATCAGCAATCA
ACTCTTTCTCGTTTGAGTTCCTATTGGCTCCCAGAGCTTCGTCGTTTAGAGATTAAGGTG
CCCATAATTGTAGCTGGGTGTAAGCTAGATCTGCGCGGTGATCATAATGCCACAAGCCTC
GAGGAGGTTATGGGACCAATCATGCAACAGTTCAGGGAGATTGAAACTTGTGTAGAATGT
TCTGCAACTACTATGATTCAGGTCCCTGATGTTTTCTATTATGCTCAAAAAGCAGTACTT
CATCCAACAGCTCCATTGTTTGATCACGATGAACAAACTTTGAAACCTCGGTGCGTCAGG
GCATTGAAAAGGATATTTATTATCTGTGATCATGACATGGACGGTGCCCTAAATGATGCA
GAGTTAAATGAGTTTCAGGTTAAATGTTTTAATGCTCCATTACAGCCTGCTGAAATAGTA
GGCGTAAAGAGGGTTGTACAAGAGAAGCAGCATGATGGAGTCAATGACCTTGGTCTTACC
CTTAGTGGTTTCCTTTTCCTCCATGCTCTTTTCATTGAGAAAGGGCGTCTTGAAACTACA
TGGGCTGTTCTGAGAAAATTTGGTTATGGGGATGATTTAGAACTGAGGGATGATTTTCTT
CCGGTTCCAACTAAGCTCTCTCCTGATCAGAGTGTGGAACTGGCAAGTGAAGCTGTGGAA
TTCCTACGTGGTATCTTCGGATTGTATGACATTGATAATGATGGAGCAGTGAGGCCTGCG
GAGCTTGAGGATCTATTTTTAACTGCACCAGAAAGTCCGTGGGATGAAGCTCCATACAAG
GATGCTGCAGAGACAACAGCACTGGGCAATTTAACACTCAAAGGTTTCGTGTCTAAGTGG
GCTCTAATGACTCTGCTTGACCCGCGACACAGTTTGGCAAATTTGATATACGTTGGATAC
GGTGGTGATCCTGCTGCAGCACTCCGTGTTACTAGGAAAAGATCAGTAGATCGTAAGAAG
CAACAAACTGAAAGAAATGTTTTCCGTTGTCTCCTTTTTGGTCCACAAAATGCTGGAAAG
TCTGCACTGTTGAATTCATTCTTGGAAAGGCCATTCTCAGAAAATTATGCCCCAACAACC
GGTGAGCAATATGCGGTGAATGTGGTTGACCAGCCTGGGGGAAATAAGAAGACTCTTATT
CTGCAAGAAATACCAGAAGAAGGAGTGAAAAAAATCCTGTCCAACAAGGAAGCTTTGGCC
AGCTGTGATGTTACCATATTTGTCTATGACAGCTCAGATGAATATTCATGGAAAAGAACA
AAAGAACTTTTAGTGGAGGTTGCCAGGCTAGGTGAAGACAGTGGTTATGGTGTTCCATGC
CTGCTTATTGCATCAAAAGATGACCTGAAACCTTATACAATGGCAGTACAAGATTCAGCA
AGGGTTACTCAGGAGTTGGGAATAGAGCCCCCTATTCCTGTAAGCATGAAATCGAAAGAT
CTGAATAATGTATTTAGCAGAATTATATGGGCTGCTGAACACCCTCATTTGAACATTCCT
GAAACTGAGACTGGGAGGAACCGGAAGCGTTACCGCCACCTTGTTAATAGCTCACTTGTG
TTTGTTTCTGTTGGGGCTGCTGTTGCGGTCGTCGGACTGGCTGCTTATCGAGCCTATGCT
GCAAGAAGGAATTCCTCTAGTTAGCAGTCGGATTTGTCTGCTGGTTTGGCCATTAATCAA
CTGTTGTCTGCAGTCTTTGCGACTTAAATAAATGGTTGATTCTGTCTCCATCCATTGAAT
TTTGCGCACGACATTTTTGGCTTTCTTGAGATAAAAGCTTGTATAGATATTTTGGTTCCT
CCTTTTTTCTTTTATTTTTCCATTCACCCAATTTTTTTTTTTTTCTCCTTAATGAGGCTG
GAGCCTGGAGATGCATCTTACTCCTTAGTTGTTGGGCTTGTATAATCTGATCAATTACCT
CGTTGGCTATTTGTGCCAGTGGTCTTTGTTGAGGTATCTAGGATAGTATGCGGACCTTGT
CGGACAATTTGTTTGTTGTATTGCCCGCAACACTTGGTGATATTTTAAACATGCAATGAT
CAAAGTGCTTCCATCCATCAAGCAAGTGTAATCTGGGATTCATGGCTGTATTTGCTGCTT
ATAATTTTATAATAGTGGTATTAGTTT