Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g31260.1
CDS Infomation

gene=Cs5g31260
Sequence

ATGGATCGTCGGGAGCGCCAAACCTCTCCGGCTCGAAGAAGCTTGAAGCGGAAGCTTGAG
CAAGATTTCGAAGAGAAACCTGATCGCAAGGTCTCGATCGTCGAATCCGGCGCCACTCAA
CAAGATCTCGTTCAAGATATCCGCGCTCAGATTGATATACTCAACTCCAAATTCTCTTCT
GATGAAACCGATCGCGCCGCCGCCAAAACCGCCTCTCACGCTCTTGTTGAATTCGCCAAA
AACGAGGAAATTGTGAGTTTAATTGTGGATAATGGAGCCGTGCCTGCATTGGTGGAACAT
CTCCAGACGCCACCACAGTTGACGAATGCTCAGATCCCGTACGAGCACGAAGTGGAGAAA
GAATGTGCTTTTGCGCTTGGACTTCTTGCTGTCAAACCAGAGCATCAACAAATCATAGTT
GATACTGGAGCTTTGCCCCATCTCGTGAGCTTATTAAAGCAGTATAAGAATGGTGGTAAT
TCTCGGGCACTCAGTGGTGTTATTAGGAGAGCAGCTGATGCAATCACCAACCTTGCACAT
GAGAACGCCAACATCAAAACCCGTGTCAGGGTTGAAGACGGCATCCCCCCTCTTGTTGAA
CTACTGAAGTTTGTAGATGTGAAGGTACAAAGGGCAGCTGCTGGTGCCCTGCGGACTCTT
GCCTTCAAAAATGATGAAAACAAAAAACTGATTGTGGAATGCAATGCTCTACCTACCCTT
GTTCTAATGCTGCGCTCAGAGGATGCTAGTGTACACTTCGAAGCTGTTGGTGTGATTGGG
AATCTAGTTCACTCTTCCCCAAGCATAAAGAAGGAAGTTATTCTTGCTGGGGCTTTGCAA
CCAGTCATTGGGCTGCTCAGTTCCTCCTGTTCAGAAAGCAAAAGAGAAGCAGCTCTGTTA
CTTGGTCAATTTGCTGCGGCCGATTCGAATTCCAAGGTGCACATTGTTCAGAGAGGAGCT
GTACGGCCATTAATTGAAATGCTTCAGTCCCCAGATTCACAGCTTAAGGAAATGTCTGCT
TTTGCACTAGGGAGATTGGCACAGGACACACACAATCAAGCTGGCATTGCTCAGGATGGT
GGTATATTGCCTTTGCTAAAGCTTCTTGATTCTAAAAATGGATCTCTGCAACATAATGCT
GCATTTGCTTTATATGGCCTTGCAGATAATGAGGATAATGTTGCAGATCTTGTGAGGGTT
GGAGGTGTTCAGAAGCTCCAGGATGGAGAATTCACTGTGCAACCAACTAAAGACTGTGTA
GCAAGGACATTAAAAAGACTAGAGGAGAAAGTTCACGGACGAGTATTGAATCATCTTTTG
TATCTGCTGCGAGTTGCCGACAGGGCTGTTAAAAGACGAGTTACTTTGGCCCTTGCCCAT
CTTTGTGCCCCTGATGATTGTAAAACTATTTTTATTGATAACAATGGATTGGAGTTACTG
TTGGGGCTCCTTGAGTCTACATCTGTAAAGCAGCGAGAGGAAAGTTCGGTGGCCTTGTAT
AAGTTGGCTACCAAAGCTACTTCTCTATCTCCTATGGATGCAGCTCCTCCATCACCAACC
CAACAGGTGTACTTGGGTGAGCAATTTGTAAACAATCCTACGTTGTCCGATGTGACATTT
GTTGTTGAAGGTAAACAATTTTATGCTCACAGAATTTGTTTGCTTGCTTCGTCGGATGCT
TTCCGTGCAATGTTTGATGGCGGTTACAAGGAGAAAAATGCAAAAGATGTAGAGATTCCA
AATATCAGATGGAATGTTTTTGAGTTGATGATGAGATTCATATATACAGGAAATGTCGAT
GTCAGTGTAGATATTGCTCAAGATCTTCTGAGGGCTGCAGACCAGTATCTTTTAGAAGGT
CTTAAACGACTCTGCGAGTATTCCATTGCACAGATTATTTCTGTTGAAAACATTATGCTC
ATGTACGAGTTATCAGAGGCCTACAATGCTACGACATTAAAGCAATCATGCATACTGTTT
ATATTGGAGAAATTTGACAAAATGAGAAACAAACCATGGTTCTTTCGTTTGATCCGTTGT
GTGTTACCAGAGATACGAAATTACTTCACAAAAGCATTTTCGAATCCTGTCATTGTGAAT
TCAAGCCAGTTGTGA

Peptide Sequence

PEP ID

Cs5g31260.1
PEP Infomation
Sequence

MDRRERQTSPARRSLKRKLEQDFEEKPDRKVSIVESGATQQDLVQDIRAQIDILNSKFSS
DETDRAAAKTASHALVEFAKNEEIVSLIVDNGAVPALVEHLQTPPQLTNAQIPYEHEVEK
ECAFALGLLAVKPEHQQIIVDTGALPHLVSLLKQYKNGGNSRALSGVIRRAADAITNLAH
ENANIKTRVRVEDGIPPLVELLKFVDVKVQRAAAGALRTLAFKNDENKKLIVECNALPTL
VLMLRSEDASVHFEAVGVIGNLVHSSPSIKKEVILAGALQPVIGLLSSSCSESKREAALL
LGQFAAADSNSKVHIVQRGAVRPLIEMLQSPDSQLKEMSAFALGRLAQDTHNQAGIAQDG
GILPLLKLLDSKNGSLQHNAAFALYGLADNEDNVADLVRVGGVQKLQDGEFTVQPTKDCV
ARTLKRLEEKVHGRVLNHLLYLLRVADRAVKRRVTLALAHLCAPDDCKTIFIDNNGLELL
LGLLESTSVKQREESSVALYKLATKATSLSPMDAAPPSPTQQVYLGEQFVNNPTLSDVTF
VVEGKQFYAHRICLLASSDAFRAMFDGGYKEKNAKDVEIPNIRWNVFELMMRFIYTGNVD
VSVDIAQDLLRAADQYLLEGLKRLCEYSIAQIISVENIMLMYELSEAYNATTLKQSCILF
ILEKFDKMRNKPWFFRLIRCVLPEIRNYFTKAFSNPVIVNSSQL*

Transcript Sequence

Transcript ID

Cs5g31260.1
Transcript Infomation

gene=Cs5g31260 CDS=63-2177
Sequence

CACCCACTTTTCATTCCCAAATTATCCCTAGCATCGTCTCCATCATTTACATCCAATTCT
TGATGGATCGTCGGGAGCGCCAAACCTCTCCGGCTCGAAGAAGCTTGAAGCGGAAGCTTG
AGCAAGATTTCGAAGAGAAACCTGATCGCAAGGTCTCGATCGTCGAATCCGGCGCCACTC
AACAAGATCTCGTTCAAGATATCCGCGCTCAGATTGATATACTCAACTCCAAATTCTCTT
CTGATGAAACCGATCGCGCCGCCGCCAAAACCGCCTCTCACGCTCTTGTTGAATTCGCCA
AAAACGAGGAAATTGTGAGTTTAATTGTGGATAATGGAGCCGTGCCTGCATTGGTGGAAC
ATCTCCAGACGCCACCACAGTTGACGAATGCTCAGATCCCGTACGAGCACGAAGTGGAGA
AAGAATGTGCTTTTGCGCTTGGACTTCTTGCTGTCAAACCAGAGCATCAACAAATCATAG
TTGATACTGGAGCTTTGCCCCATCTCGTGAGCTTATTAAAGCAGTATAAGAATGGTGGTA
ATTCTCGGGCACTCAGTGGTGTTATTAGGAGAGCAGCTGATGCAATCACCAACCTTGCAC
ATGAGAACGCCAACATCAAAACCCGTGTCAGGGTTGAAGACGGCATCCCCCCTCTTGTTG
AACTACTGAAGTTTGTAGATGTGAAGGTACAAAGGGCAGCTGCTGGTGCCCTGCGGACTC
TTGCCTTCAAAAATGATGAAAACAAAAAACTGATTGTGGAATGCAATGCTCTACCTACCC
TTGTTCTAATGCTGCGCTCAGAGGATGCTAGTGTACACTTCGAAGCTGTTGGTGTGATTG
GGAATCTAGTTCACTCTTCCCCAAGCATAAAGAAGGAAGTTATTCTTGCTGGGGCTTTGC
AACCAGTCATTGGGCTGCTCAGTTCCTCCTGTTCAGAAAGCAAAAGAGAAGCAGCTCTGT
TACTTGGTCAATTTGCTGCGGCCGATTCGAATTCCAAGGTGCACATTGTTCAGAGAGGAG
CTGTACGGCCATTAATTGAAATGCTTCAGTCCCCAGATTCACAGCTTAAGGAAATGTCTG
CTTTTGCACTAGGGAGATTGGCACAGGACACACACAATCAAGCTGGCATTGCTCAGGATG
GTGGTATATTGCCTTTGCTAAAGCTTCTTGATTCTAAAAATGGATCTCTGCAACATAATG
CTGCATTTGCTTTATATGGCCTTGCAGATAATGAGGATAATGTTGCAGATCTTGTGAGGG
TTGGAGGTGTTCAGAAGCTCCAGGATGGAGAATTCACTGTGCAACCAACTAAAGACTGTG
TAGCAAGGACATTAAAAAGACTAGAGGAGAAAGTTCACGGACGAGTATTGAATCATCTTT
TGTATCTGCTGCGAGTTGCCGACAGGGCTGTTAAAAGACGAGTTACTTTGGCCCTTGCCC
ATCTTTGTGCCCCTGATGATTGTAAAACTATTTTTATTGATAACAATGGATTGGAGTTAC
TGTTGGGGCTCCTTGAGTCTACATCTGTAAAGCAGCGAGAGGAAAGTTCGGTGGCCTTGT
ATAAGTTGGCTACCAAAGCTACTTCTCTATCTCCTATGGATGCAGCTCCTCCATCACCAA
CCCAACAGGTGTACTTGGGTGAGCAATTTGTAAACAATCCTACGTTGTCCGATGTGACAT
TTGTTGTTGAAGGTAAACAATTTTATGCTCACAGAATTTGTTTGCTTGCTTCGTCGGATG
CTTTCCGTGCAATGTTTGATGGCGGTTACAAGGAGAAAAATGCAAAAGATGTAGAGATTC
CAAATATCAGATGGAATGTTTTTGAGTTGATGATGAGATTCATATATACAGGAAATGTCG
ATGTCAGTGTAGATATTGCTCAAGATCTTCTGAGGGCTGCAGACCAGTATCTTTTAGAAG
GTCTTAAACGACTCTGCGAGTATTCCATTGCACAGATTATTTCTGTTGAAAACATTATGC
TCATGTACGAGTTATCAGAGGCCTACAATGCTACGACATTAAAGCAATCATGCATACTGT
TTATATTGGAGAAATTTGACAAAATGAGAAACAAACCATGGTTCTTTCGTTTGATCCGTT
GTGTGTTACCAGAGATACGAAATTACTTCACAAAAGCATTTTCGAATCCTGTCATTGTGA
ATTCAAGCCAGTTGTGAATGTAAATGATTTAGCTTTAATTTTGATATTGAAACAGAATAG
TAGATGAAGACCAAGAATGTAAATAGAGCTTGGGTTATTGTTGTTGAGCTAGTGGAGGAA
ATTTTGCTGATTCCTCGTGTTAGGTGTAAGAAGACTTGGCGACTTCTCAGATAATGTAAA
TCCCATATATTGATGTTGTCATAGGCAATTGAAGACTGGGAGGTTGAAAATAGGCGATAA
TTATTGGATGATCAAATTTACTTGACGCGCATTTTGCAGTCGTTTAGACAAGCAGGACG