Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g30850.3
CDS Infomation

gene=Cs5g30850
Sequence

ATGGATAAGGGTAACGCAGACTACGTGTATCCATCGTCTAAAGAAAATGTGGAGAATGCA
CATCGTGTTGCGATTCCCCCACCGCAGCCATTTTTCAATTCACTGAAGTATAATCTTAAA
GAGACGTTCTTCCCTGATGATCCGCTCAGGCTATTCAAGAACAAGCCGGCATCTAAGAAG
TTCATATTAGGCCTTCAGTATGTGTTTCCCATTTTTGAATGGGCTCCGCGTTACAGCTTT
CAGTTCTTGAAAGCTGACCTTATTGCTGGGATCACCATTGCAAGTCTCGCAATTCCTCAG
GGGATTAGTTATGCGAAGCTGGCGAACTTGCCCCCAATTCTTGGCCTATATTCAAGCTTT
GTTCCGCCATTGGTTTATGCTATCATGGGGAGCTCCAAAGATTTGGCAGTTGGAACGGTG
GCTGTCGCCTCACTTCTCATAGCTTCATTCTTGGGGCAAGAAGTTAATTATAATGAGAAC
CCTAAGCTATATCTTCATCTTGCTTTCACTGCAACATTTTTTGCTGGTGTTTTTCAAGCT
TCCTTGGGACTGCTAAGGCTAGGGTTTATCGTGGACTTTTTATCGCATGCAGCGATAGTA
GGTTTCATGGGAGGAGCAGCCACAGTGGTGTGCTTGCAACAGCTCAAAGGAATACTTGGC
CTTGAACACTTCACTCATGCCACTGATGTGATGTCTGTCATGCACTCTATTTTCTCACAA
ACACAGCGGTGGAGATGGGAGAGTGGCGTACTCGGTTGTGGCTTCCTTTTCTTTCTCCTC
ATCACTAGATACTTTAGCAAGAGAAAGCCAAAGTTCTTTTGGATATCAGCAATGGCACCA
TTAACGTCGGTTATTTTGGGAAGCTTACTCGTTTATCTTTCCCACGCTGAGAGACACGGT
GTTCAAGTGATAGGGTACTTGAAGAAGGGATTGAATCCACCTTCATTTTCGGATTTGGTG
TTCGTGTCACCTTATCTCACAACAGCTATCAAAACTGGCATCATCACTGGCGTCATTGCT
ATGGCTGAAGGGATAGCTGTAGGAAGAAGCTTTGCCATGTTCAAGAATTATCATATTGAT
GGGAACAAAGAGATGATAGCTTTCGGGATGATGAACATAGCTGGTTCTTGCACTTCTTGC
TATCTCACAACAGGGCCGTTTTCGCGGTCAGCTGTGAACTTCAATGCAGGATGCAAGACA
GCAGTGTCGAACATTGTTATGTCAATGGCAGTGATGGTCACATTGCTTTTCTTAACACCA
TTGTTCCATTACACTCCCCTTGTGGTTTTATCCGCAATCATAATGGCTGCGATGCTCGGT
CTCATTGACTACGAAGCAGTCATCCATCTATTTAAAGTTGACAAATTTGATTTCATAGTG
TGCATTGGTGCATACGTTGGCGTGGTCTTTGGCAGCATCCAAATTGGGTTAGTCATTGCG
ATATCAATTTCTGTGCTGAGGGTACTTCTGTTTGTGGCAAGGCCGAGGACTTCAGTTCTT
GGTAACATTCCAAATTCGAGAATATACAGAAACATTGAACACTACCCAAATGCAAACAAT
GTTACGGGGGTTCTCATTCTTAAGATTGATGCTCCTATTTACTTTGCCAATGCAAGCTAC
TTAAGAGAAAGGATTGCAAGATGGGTTGAGGAAGAGGAAGATAAGTTGAAAGCTTCAGAG
GAATCCAGCTTACACTATGTTATACTGGATATGGGCGGTGAGCGTTGGATTCAGAGATCT
TCTTATCAAAATCTTGCGTTTATTTCTCGAAAACTATGA

Peptide Sequence

PEP ID

Cs5g30850.3
PEP Infomation
Sequence

MDKGNADYVYPSSKENVENAHRVAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKK
FILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSF
VPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFAGVFQA
SLGLLRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKGILGLEHFTHATDVMSVMHSIFSQ
TQRWRWESGVLGCGFLFFLLITRYFSKRKPKFFWISAMAPLTSVILGSLLVYLSHAERHG
VQVIGYLKKGLNPPSFSDLVFVSPYLTTAIKTGIITGVIAMAEGIAVGRSFAMFKNYHID
GNKEMIAFGMMNIAGSCTSCYLTTGPFSRSAVNFNAGCKTAVSNIVMSMAVMVTLLFLTP
LFHYTPLVVLSAIIMAAMLGLIDYEAVIHLFKVDKFDFIVCIGAYVGVVFGSIQIGLVIA
ISISVLRVLLFVARPRTSVLGNIPNSRIYRNIEHYPNANNVTGVLILKIDAPIYFANASY
LRERIARWVEEEEDKLKASEESSLHYVILDMGGERWIQRSSYQNLAFISRKL*

Transcript Sequence

Transcript ID

Cs5g30850.3
Transcript Infomation

gene=Cs5g30850 CDS=480-2258
Sequence

GAGAAGCTCTGCCTTATGTGCATTGTATGTAATAAAAAAAGAATACGTGAGATTCCAGGA
TTTTGCCTCCTCTTGTTAGAGGAGAAATAGGGAAAAAAAAAAAAAGAAAAGAAAAAGAAG
AAGAACAGCACAGAAGGCACGAGGTCGGCTGCTATGTCAAGAGATAAAAGCTTTAATTGA
ATATTAAAACCCTAGGCAAAAATATGTCTCCTTTGAATATACTGCTTTGTGGGTCCATCG
ACGCACTGAAACTTGTAATGAAAGAGCCCCTTCACCAATCTCCCTCTATAAAGCCATTGA
CACCCACACACACTCTCAGTCACTGCGCCACCCCACCTCCGAATTCAGCGTAGCCACTCC
TATAACACTGCGCATATCTTTTGCATTTAGCTCAACCCAAATACGTTCTCCGATATAAAA
CGCAGCCGCTGCATTTTATTCTCTCTATCTTGCATTTAGTTAATTAATTAATTAACTACA
TGGATAAGGGTAACGCAGACTACGTGTATCCATCGTCTAAAGAAAATGTGGAGAATGCAC
ATCGTGTTGCGATTCCCCCACCGCAGCCATTTTTCAATTCACTGAAGTATAATCTTAAAG
AGACGTTCTTCCCTGATGATCCGCTCAGGCTATTCAAGAACAAGCCGGCATCTAAGAAGT
TCATATTAGGCCTTCAGTATGTGTTTCCCATTTTTGAATGGGCTCCGCGTTACAGCTTTC
AGTTCTTGAAAGCTGACCTTATTGCTGGGATCACCATTGCAAGTCTCGCAATTCCTCAGG
GGATTAGTTATGCGAAGCTGGCGAACTTGCCCCCAATTCTTGGCCTATATTCAAGCTTTG
TTCCGCCATTGGTTTATGCTATCATGGGGAGCTCCAAAGATTTGGCAGTTGGAACGGTGG
CTGTCGCCTCACTTCTCATAGCTTCATTCTTGGGGCAAGAAGTTAATTATAATGAGAACC
CTAAGCTATATCTTCATCTTGCTTTCACTGCAACATTTTTTGCTGGTGTTTTTCAAGCTT
CCTTGGGACTGCTAAGGCTAGGGTTTATCGTGGACTTTTTATCGCATGCAGCGATAGTAG
GTTTCATGGGAGGAGCAGCCACAGTGGTGTGCTTGCAACAGCTCAAAGGAATACTTGGCC
TTGAACACTTCACTCATGCCACTGATGTGATGTCTGTCATGCACTCTATTTTCTCACAAA
CACAGCGGTGGAGATGGGAGAGTGGCGTACTCGGTTGTGGCTTCCTTTTCTTTCTCCTCA
TCACTAGATACTTTAGCAAGAGAAAGCCAAAGTTCTTTTGGATATCAGCAATGGCACCAT
TAACGTCGGTTATTTTGGGAAGCTTACTCGTTTATCTTTCCCACGCTGAGAGACACGGTG
TTCAAGTGATAGGGTACTTGAAGAAGGGATTGAATCCACCTTCATTTTCGGATTTGGTGT
TCGTGTCACCTTATCTCACAACAGCTATCAAAACTGGCATCATCACTGGCGTCATTGCTA
TGGCTGAAGGGATAGCTGTAGGAAGAAGCTTTGCCATGTTCAAGAATTATCATATTGATG
GGAACAAAGAGATGATAGCTTTCGGGATGATGAACATAGCTGGTTCTTGCACTTCTTGCT
ATCTCACAACAGGGCCGTTTTCGCGGTCAGCTGTGAACTTCAATGCAGGATGCAAGACAG
CAGTGTCGAACATTGTTATGTCAATGGCAGTGATGGTCACATTGCTTTTCTTAACACCAT
TGTTCCATTACACTCCCCTTGTGGTTTTATCCGCAATCATAATGGCTGCGATGCTCGGTC
TCATTGACTACGAAGCAGTCATCCATCTATTTAAAGTTGACAAATTTGATTTCATAGTGT
GCATTGGTGCATACGTTGGCGTGGTCTTTGGCAGCATCCAAATTGGGTTAGTCATTGCGA
TATCAATTTCTGTGCTGAGGGTACTTCTGTTTGTGGCAAGGCCGAGGACTTCAGTTCTTG
GTAACATTCCAAATTCGAGAATATACAGAAACATTGAACACTACCCAAATGCAAACAATG
TTACGGGGGTTCTCATTCTTAAGATTGATGCTCCTATTTACTTTGCCAATGCAAGCTACT
TAAGAGAAAGGATTGCAAGATGGGTTGAGGAAGAGGAAGATAAGTTGAAAGCTTCAGAGG
AATCCAGCTTACACTATGTTATACTGGATATGGGCGGTGAGCGTTGGATTCAGAGATCTT
CTTATCAAAATCTTGCGTTTATTTCTCGAAAACTATGAAAATTACAACTTTAATTTCTGA
CTTTATTTATGTTTTTTTGGGGGGATTTTTATCACAGCTGTTGGTAACATTGACACTAGT
GGCATCAGCATGCTTGAGGAAGTTAAGAAAACTCTTGATAGAAGAGAGCTCAAGGTACAT
TAATTTTTGTTCTACATATTTAGCTATTTGAAGACAATAGACATGGGTTTGCACTAATTT
TGTCTTTCCCATCTCCCATTATTTTTAGCTTGTGCTAGCAAATCCTGGAGCTGAGGTGAC
GAAGAAGCTTGACAAATCCAAGTTCATTGAAAATATGGGCCAAGAATGGATATATCTGAC
AGTAGGGGAGGCTGTTACAGCATGCAATTTCAGGCTTCATACTTGCGAACCAAATCCTGA
GAAAGCAGAATCAGAGCCATGTGACAACGTATAAATCCATATTTAACATTACTTTTCTCT
GCAATCGCTCAATTACTTTTTATCTATTCTAGGGAAACTATGTCTCTGTCGCTTGATGTA
ATTATGATGCAACATAATGTATGCATCGGAATTAACTAAACAGTGACGAGTCACATTTAG
TTTGAGGTTGATGTTATAATGTTATATTGAAGTTGGAGGTATTTTTCTCCTTCCAACACT
ATGTATTGTACAATAATAGAAGTCATATGCCAAATTTTGGCAGATTGCTATTTGCTTCAT
CATAACAAAGTTGAATTAACGGAGGCGAG