Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g30830.2
CDS Infomation

gene=Cs5g30830
Sequence

ATGGAGCAATATGAAGTTTTAGAGCAGATTGGGAAAGGATCTTTTGGTTCGGCTCTTCTT
GTTAGACATAAACACGAAAGGAAGAAGTATGTCCTGAAAAAGATTCGGCTTGCCCGTCAG
ACTGACAGAGCACGCAGATCTGCCCATCAGGAGATGGAGCTTATTTCTAGAGTGCGAAAT
CCATTTATTGTGGAGTACAAAGATTCTTGGGTAGAAAAGGGTTGCTATGTTTGCATTATT
ATAGGCTACTGTGAGGGGGGAGACATGGCAGAGGCTATAAAAAAGGCTAATGGTGTTCAT
TTTCCTGAAGAGAAACTTTGCAAGTGGCTAGTTCAACTCCTTATGGCACTTAATTATTTG
CATGCCAATCATATTCTTCATCGTGATGTCAAGTGCTCAAATATATTTTTGACAAGAGAT
CAGGACATACGTCTAGGTGATTTTGGCCTTGCTAAAATGTTGATTTCTGATGATCTTGCT
TCGTCTGTTGTGGGAACTCCCAGCTATATGTGCCCTGAACTTCTTGCTGATATACCTTAT
GGTTCCAAGTCAGATATTTGGTCTTTAGGATGCTGTGTATATGAAATGAGTGCCCAAAAG
GCTGCCTTCAAAGCTTTTGACATGCAAGCTCTGATTAATAAAATAAATAAGTCTATAGTG
GCTCCTCTTCCAACTGTGTACTCTGGTGCATTTCGAGGACTTGTTAAAAGCATGCTGCGG
AAGAATCCAGAATTTAGACCAAGTGCTGCCGAGTTGCTCTGTCACCCGCATCTTCAACCT
TATGTGCTTGGAATTCATCTAAAACTGAATGGCCCTAGACGGAATACTTTCCCGTTAGAG
TGGTCGGATTCCAACTTCAAAAAAACTAGATTCATGGAACCAGAAGCTATTTCTATTCAC
AGTAACAGAGAAAAGCGGCAATCATTCAGCAATGACAGGGCGTTGAATCCTAGTGTATCT
GAAACTGAACAGGACTCCCTATCTTCAACTCTAAGAGGACGTGCATTTGGAAATTATATG
AATCAAAAGTTCAAAGAACTATCTATTGGTGTTGTCCATGAAGAGCTTGGTGTTGACATG
TCAACAACCCCAAATGTTTGCAATGCTGGTAAAACCCCAAGACTGACACCAGCCAAAGTT
TCTGCTACTCCCAGAAGACAGGCAACACCATCAAAGAATACACATATTGGTTCAAAACGT
GATTCGCTGCCAATTTCACATAATCCAGGGGGTAAGCCTTCTCGCCCGGCACGTAGAGCA
TCTCTTCCTTTAACCACAACCAGAGCCTCAGAATCCCATTATCAGCCCATCACTTGCATC
ATGAAATCCCCAGATGTTTCTGTCAATGCTCCAAGAATTGACAAGATTGCCGAATTTCCC
CTGGCCTCGTCTGAGGACCCCTTACTTCCCATCCCTAAAACATCTTCAACATCTGCATGT
TGCTCGTCTTCTTCACCGGACAGCATTGATTGTTCAATCACAAAGGACAAGTGCACAATA
CAGGTCATGGATAGAACCGCCTCCCGGCCAAATTTTGTTGTCCATACAACCCATGGAACT
ATTCAAAATGGAAGTGAATTCTCAGAGCCTAATCCAGCCACTGGTGTTTCTAGTCATTCA
TCTTTGGAGTCACAGCACCGCCGATTTGACACCTCGTCATTTCAACAACGTGCTGAGGCA
TTGGAAGGTTTGCTTGAGTTTAGTGCACGGCTTTTGCAACAAGAGAGGTTTGAAGAGCTT
GGAGTGTTGTTAAAGCCATTTGGGCCGGAAAAGGTTTCACCTAGGGAAACAGCTATCTGG
TTGGCTAAGAGCTTCAAAGAAACCGCAGTCTAG

Peptide Sequence

PEP ID

Cs5g30830.2
PEP Infomation
Sequence

MEQYEVLEQIGKGSFGSALLVRHKHERKKYVLKKIRLARQTDRARRSAHQEMELISRVRN
PFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYL
HANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPY
GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLR
KNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPLEWSDSNFKKTRFMEPEAISIH
SNREKRQSFSNDRALNPSVSETEQDSLSSTLRGRAFGNYMNQKFKELSIGVVHEELGVDM
STTPNVCNAGKTPRLTPAKVSATPRRQATPSKNTHIGSKRDSLPISHNPGGKPSRPARRA
SLPLTTTRASESHYQPITCIMKSPDVSVNAPRIDKIAEFPLASSEDPLLPIPKTSSTSAC
CSSSSPDSIDCSITKDKCTIQVMDRTASRPNFVVHTTHGTIQNGSEFSEPNPATGVSSHS
SLESQHRRFDTSSFQQRAEALEGLLEFSARLLQQERFEELGVLLKPFGPEKVSPRETAIW
LAKSFKETAV*

Transcript Sequence

Transcript ID

Cs5g30830.2
Transcript Infomation

gene=Cs5g30830 CDS=482-2314
Sequence

GAAGATGCGTCAATTGAATTTTTCCTTCCTTTTGCTTCTTGGATGAGTGTTATCTGTTAT
GGATACATAATGATGGTCAAGTTGTTTAATCAGTGATTAGACGCACGAACGACTGGCTAA
ATGATACAATAAACACTCAATTATTCACCAATTCTTTTCATTTCACTGTTGCTTTGAAAG
CGAAGCACTAACTTTGATGCATCAATTTCGCTTCCTTTTCTACGGAGTTGTGCAGTATTT
GTGCTATTGGCTTCTGTACTTAGGCTGTAATTATGGGTTTAAAATGGAGTGACCTGTTTG
ATAACTCAAACCATTCCAAATAGAGAGGCTTATGCTTTTCTTTTTTTTCATTTCTTTGTT
TCTTTTACATGTTATCCAGCTTTAATTTAACAATATTGAATTTTGATTTTGCTTCCGTGT
GGATGCTTGGTAGATTGAAAGTGAGAAACTATCTCTTCAAAGGTTCGTGATAAAACCTAC
AATGGAGCAATATGAAGTTTTAGAGCAGATTGGGAAAGGATCTTTTGGTTCGGCTCTTCT
TGTTAGACATAAACACGAAAGGAAGAAGTATGTCCTGAAAAAGATTCGGCTTGCCCGTCA
GACTGACAGAGCACGCAGATCTGCCCATCAGGAGATGGAGCTTATTTCTAGAGTGCGAAA
TCCATTTATTGTGGAGTACAAAGATTCTTGGGTAGAAAAGGGTTGCTATGTTTGCATTAT
TATAGGCTACTGTGAGGGGGGAGACATGGCAGAGGCTATAAAAAAGGCTAATGGTGTTCA
TTTTCCTGAAGAGAAACTTTGCAAGTGGCTAGTTCAACTCCTTATGGCACTTAATTATTT
GCATGCCAATCATATTCTTCATCGTGATGTCAAGTGCTCAAATATATTTTTGACAAGAGA
TCAGGACATACGTCTAGGTGATTTTGGCCTTGCTAAAATGTTGATTTCTGATGATCTTGC
TTCGTCTGTTGTGGGAACTCCCAGCTATATGTGCCCTGAACTTCTTGCTGATATACCTTA
TGGTTCCAAGTCAGATATTTGGTCTTTAGGATGCTGTGTATATGAAATGAGTGCCCAAAA
GGCTGCCTTCAAAGCTTTTGACATGCAAGCTCTGATTAATAAAATAAATAAGTCTATAGT
GGCTCCTCTTCCAACTGTGTACTCTGGTGCATTTCGAGGACTTGTTAAAAGCATGCTGCG
GAAGAATCCAGAATTTAGACCAAGTGCTGCCGAGTTGCTCTGTCACCCGCATCTTCAACC
TTATGTGCTTGGAATTCATCTAAAACTGAATGGCCCTAGACGGAATACTTTCCCGTTAGA
GTGGTCGGATTCCAACTTCAAAAAAACTAGATTCATGGAACCAGAAGCTATTTCTATTCA
CAGTAACAGAGAAAAGCGGCAATCATTCAGCAATGACAGGGCGTTGAATCCTAGTGTATC
TGAAACTGAACAGGACTCCCTATCTTCAACTCTAAGAGGACGTGCATTTGGAAATTATAT
GAATCAAAAGTTCAAAGAACTATCTATTGGTGTTGTCCATGAAGAGCTTGGTGTTGACAT
GTCAACAACCCCAAATGTTTGCAATGCTGGTAAAACCCCAAGACTGACACCAGCCAAAGT
TTCTGCTACTCCCAGAAGACAGGCAACACCATCAAAGAATACACATATTGGTTCAAAACG
TGATTCGCTGCCAATTTCACATAATCCAGGGGGTAAGCCTTCTCGCCCGGCACGTAGAGC
ATCTCTTCCTTTAACCACAACCAGAGCCTCAGAATCCCATTATCAGCCCATCACTTGCAT
CATGAAATCCCCAGATGTTTCTGTCAATGCTCCAAGAATTGACAAGATTGCCGAATTTCC
CCTGGCCTCGTCTGAGGACCCCTTACTTCCCATCCCTAAAACATCTTCAACATCTGCATG
TTGCTCGTCTTCTTCACCGGACAGCATTGATTGTTCAATCACAAAGGACAAGTGCACAAT
ACAGGTCATGGATAGAACCGCCTCCCGGCCAAATTTTGTTGTCCATACAACCCATGGAAC
TATTCAAAATGGAAGTGAATTCTCAGAGCCTAATCCAGCCACTGGTGTTTCTAGTCATTC
ATCTTTGGAGTCACAGCACCGCCGATTTGACACCTCGTCATTTCAACAACGTGCTGAGGC
ATTGGAAGGTTTGCTTGAGTTTAGTGCACGGCTTTTGCAACAAGAGAGGTTTGAAGAGCT
TGGAGTGTTGTTAAAGCCATTTGGGCCGGAAAAGGTTTCACCTAGGGAAACAGCTATCTG
GTTGGCTAAGAGCTTCAAAGAAACCGCAGTCTAGCTGGAATACTTGAGTGCCCTGAGCAC
TGCCACTTGTATATATTGCCTCTTAACTCCATTTTTGTTTCTTGTATTAGTCTTGTTTTT
ACCCATTATAACTGAAGTCAGATTGGAGGCTAATGATGCGCATGTGCGTTCCAATGTGCT
TCGTTTAATTTCAGTAGAGCTAGGGCATGTTTTTTGGAAGTATACCGATTTGAAAAGCGA
GAGAGATGGAAATCAATATGTCTTCACCGAGTATGTATCGGAGTCGTGTGAGAATCTATC
TATCCTATCTATCATTTGGTGCTTTTACGTGTTGTGTACTCATGGGTGACTCAAATAAAT
AAATGGGTGGCTGTTAGTCTTC