Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g30350.1
CDS Infomation

gene=Cs5g30350
Sequence

ATGGCAGCATTTTGTCCATCCAACACGATTCTTTCCCTTAAAAAAAACCCAGCAAATGGT
AGTTTTCGAGCTGGAACGGGCTTCCTGGTTTCTCATTCAGCCCAAAGATCACAATTTGGT
CCCTCGAAAACCCTAAGCTTTGGAACAAAGAAAGGACCAACCACTGCCATACCTAAGGTC
TTGTCCAAAACTAACGAGTCCTCACCATCCATAATCACTGAACTGGACAAACAGCAAGAT
CATCGCCAACAACGCGGAGATGGTTTTACGACCAATAAACAAGAGACCGCAGAGAGAAAA
TTAGGTGACGTGTGGCGAGAAATCCACGGCCAAGATGACTGGGTTGGCATGATTGATCCA
ATGGACCCAATTTTACGGTCCGAACTGATCCGGTACGGCGAGATGGCACAAGCCAGCTAC
GATGCCTTCGACTTTGATCCATTTTCAAAGTACTGCGGAAGCTGCAGATTCATGCAGCGT
GAGTTCTTCAACTCACTAGAGATGTCCCATCACGGCTACGATGTCTCCAGGTATTTATAC
GCGACCTCGAATATCAACCTTCCGAATTTCTTTAAGAAGTCTCGCTGGCCTAAGATGTGG
AGCAAGAACGCCAACTGGATGGGATACGTCGCCGTATCGAACGACGAAACCACGAAGCGT
TTGGGCCGCCGTGACATCACCATTGCGTGGAGAGGCACGGTGACGCGCCTCGAGTGGATC
GCTGATTTGATGGATTTTCTCAAACCCTTTTCGAATAACAAGATCCCCTGTCCGGATCCG
ACAGTGAAAGCCGAATCCGGATTCTTAGATCTGTACACGGACAAGGATGTCACGTGCCGG
TTCTGTAAGTTCTCAGCTCGAGAGCAAATACTCACAGAAGTTAAAAGATTACTAGAACTT
TACTACGACGAAGACGTCAGCATAACCGTCACGGGGCACAGTCTGGGGAGTGCCTTGGCG
ATATTGAGCGCATACGACATCGTTGAGACCGGCATCAACGTGCTGAGGGACAGCAGGGCT
GTGCCGGTATGTGTGTATTCGTTTTCGGGTCCTCGGGTCGGGAACGTGAGATTCAAAGAG
AGGATTGAGATATTAGGGTTAAAGGTTTTGAGGGTGATTAATGTGCACGATGTGGTGCCT
AAAACGCCCGGTTTTCTATTTAATGAAAATGTTTCGCCTGTTTTGATGAAAATGGCTGAG
GGGTTCCCTTGGAGTTACTCGCACGTTGGGGTTGAGTTGGCGTTGGATCACAAGAACTCT
CCCTTCTTGAATCCCGCGGCTGATCCTACATGTGCCCATAATTTGGAGGCTCTCTTGCAT
TTGCTTGATGGATACCATGGAAAGGGGCATAGATTTGTGCTAGCAAGCGGAAGAGACCCG
GCACTGGTGAACAAGGCGTCTGATTTTCTGAAAGATCACTACTTGGTTCCGCCGTATTGG
AGGCAAAATCAGAACAAGGGATTGGTCAGGAGCAAAGACGGGCGTTGGGTGCAGCCTGAA
AGGCCTAAACTCGATGATCATCCCCCCAATATTCACAACCATCTCAAGCAATTAGGCCTT
GCTCATTCGGAGCATTTCTAG

Peptide Sequence

PEP ID

Cs5g30350.1
PEP Infomation
Sequence

MAAFCPSNTILSLKKNPANGSFRAGTGFLVSHSAQRSQFGPSKTLSFGTKKGPTTAIPKV
LSKTNESSPSIITELDKQQDHRQQRGDGFTTNKQETAERKLGDVWREIHGQDDWVGMIDP
MDPILRSELIRYGEMAQASYDAFDFDPFSKYCGSCRFMQREFFNSLEMSHHGYDVSRYLY
ATSNINLPNFFKKSRWPKMWSKNANWMGYVAVSNDETTKRLGRRDITIAWRGTVTRLEWI
ADLMDFLKPFSNNKIPCPDPTVKAESGFLDLYTDKDVTCRFCKFSAREQILTEVKRLLEL
YYDEDVSITVTGHSLGSALAILSAYDIVETGINVLRDSRAVPVCVYSFSGPRVGNVRFKE
RIEILGLKVLRVINVHDVVPKTPGFLFNENVSPVLMKMAEGFPWSYSHVGVELALDHKNS
PFLNPAADPTCAHNLEALLHLLDGYHGKGHRFVLASGRDPALVNKASDFLKDHYLVPPYW
RQNQNKGLVRSKDGRWVQPERPKLDDHPPNIHNHLKQLGLAHSEHF*

Transcript Sequence

Transcript ID

Cs5g30350.1
Transcript Infomation

gene=Cs5g30350 CDS=471-2051
Sequence

CAAGGATGCCTCTTTTATTTCTATTTTAAATTAAGTAGAAAGGTTCAAGTCTTTTCATAC
AGATATGTTCTATGCATTTTCTCTTATGCCCTTCAAAAAATTAGCCCTACCTAACCATTA
ATCAGAGGATTTAGGTACTTACTTTAGTCCAACCATTGAGAAATACTCTGCGCATGCATG
TATGGATTACTGTGGACACATATGACATATGGTGGAAGTTATCACAGAGGAACTCTCGGG
AAACCAAAAAATAATAAAAGATAGGCACCTCGACTAGCTCGGGGAACCCCATGATTCACA
TGCACTTAAAAAATACAATATGTACAGATTTATATAATAATATTAGGATAGCATTATGTA
AATAATTATTTCTCCTCCCAATATAACTCTCTCGCGCACCTTCCTTTTTCACAAGTTCAC
CAGATCATCTTGGACCAGCAAAATTAAGCTTCGCAAATAAAAGTCCTTCGATGGCAGCAT
TTTGTCCATCCAACACGATTCTTTCCCTTAAAAAAAACCCAGCAAATGGTAGTTTTCGAG
CTGGAACGGGCTTCCTGGTTTCTCATTCAGCCCAAAGATCACAATTTGGTCCCTCGAAAA
CCCTAAGCTTTGGAACAAAGAAAGGACCAACCACTGCCATACCTAAGGTCTTGTCCAAAA
CTAACGAGTCCTCACCATCCATAATCACTGAACTGGACAAACAGCAAGATCATCGCCAAC
AACGCGGAGATGGTTTTACGACCAATAAACAAGAGACCGCAGAGAGAAAATTAGGTGACG
TGTGGCGAGAAATCCACGGCCAAGATGACTGGGTTGGCATGATTGATCCAATGGACCCAA
TTTTACGGTCCGAACTGATCCGGTACGGCGAGATGGCACAAGCCAGCTACGATGCCTTCG
ACTTTGATCCATTTTCAAAGTACTGCGGAAGCTGCAGATTCATGCAGCGTGAGTTCTTCA
ACTCACTAGAGATGTCCCATCACGGCTACGATGTCTCCAGGTATTTATACGCGACCTCGA
ATATCAACCTTCCGAATTTCTTTAAGAAGTCTCGCTGGCCTAAGATGTGGAGCAAGAACG
CCAACTGGATGGGATACGTCGCCGTATCGAACGACGAAACCACGAAGCGTTTGGGCCGCC
GTGACATCACCATTGCGTGGAGAGGCACGGTGACGCGCCTCGAGTGGATCGCTGATTTGA
TGGATTTTCTCAAACCCTTTTCGAATAACAAGATCCCCTGTCCGGATCCGACAGTGAAAG
CCGAATCCGGATTCTTAGATCTGTACACGGACAAGGATGTCACGTGCCGGTTCTGTAAGT
TCTCAGCTCGAGAGCAAATACTCACAGAAGTTAAAAGATTACTAGAACTTTACTACGACG
AAGACGTCAGCATAACCGTCACGGGGCACAGTCTGGGGAGTGCCTTGGCGATATTGAGCG
CATACGACATCGTTGAGACCGGCATCAACGTGCTGAGGGACAGCAGGGCTGTGCCGGTAT
GTGTGTATTCGTTTTCGGGTCCTCGGGTCGGGAACGTGAGATTCAAAGAGAGGATTGAGA
TATTAGGGTTAAAGGTTTTGAGGGTGATTAATGTGCACGATGTGGTGCCTAAAACGCCCG
GTTTTCTATTTAATGAAAATGTTTCGCCTGTTTTGATGAAAATGGCTGAGGGGTTCCCTT
GGAGTTACTCGCACGTTGGGGTTGAGTTGGCGTTGGATCACAAGAACTCTCCCTTCTTGA
ATCCCGCGGCTGATCCTACATGTGCCCATAATTTGGAGGCTCTCTTGCATTTGCTTGATG
GATACCATGGAAAGGGGCATAGATTTGTGCTAGCAAGCGGAAGAGACCCGGCACTGGTGA
ACAAGGCGTCTGATTTTCTGAAAGATCACTACTTGGTTCCGCCGTATTGGAGGCAAAATC
AGAACAAGGGATTGGTCAGGAGCAAAGACGGGCGTTGGGTGCAGCCTGAAAGGCCTAAAC
TCGATGATCATCCCCCCAATATTCACAACCATCTCAAGCAATTAGGCCTTGCTCATTCGG
AGCATTTCTAGCTAGTCTACTTCAGTCTACATATCTCCGTCCGAATAAGTACTTGAGCAT
GCATCCAGTTCTAGGCTAAATATTTGAAAATGCTGCTGTCGATGTGAATTAAGTGTAAAA
TATATTTATATTGTAATGTATGATTTTGGGCATATAGGGATACAATGACATGATATCATT
CAAAGATGATCAATAC