Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g29920.1
CDS Infomation

gene=Cs5g29920
Sequence

ATGGCCCCTGACCACAACCACTTCTATAACCAGGGAGATCAGGCTCTAGCACCCATCAAA
AGCCAGGAGATGTTAACAAATCAAGCTTCATTGTCGAATTCGGAATCTGCTTTTCCTATA
CTAGCCATTGCTATCCTAAGCATCATGGGCACCGCGTTCTTGCTTCTTAGCTACTATGTT
TTTGTGAGTAAATGTTGCAATAACTGGCACCTAATTGATCTGCTGAGAAGATTTTCTGTG
TTGCGAGCTAGACAGATTGAAGAACCATTTATAGCCCTCTCTCCAACAATGTGGAACCGT
GGGCTTGATGATTCTGTCATTCGCGATATCCCAACTTTTCAATTCAAAAGAGAAGGTGAG
GATATGAGTATATACGGTTGTGTGGTTTGTTTGAATGAGTTTCAAGAACAAGATATGCTA
AGAGTTCTTCCCAACTGCAGTCACGCATTCCACTTAGATTGTATTGATATATGGCTTCAG
AGCAATGCAAATTGCCCTCTTTGCCGCACAAGCATTTCAGGAACAACCCGATATCCAATT
GATCAAATTATTGCACCGAGACCTTCACCTCAGGGCTCACAGCAATTTAGTGAAAGCCTC
ATGGGTGGTGATGATGATTTTGTGGTAATTGAATTGGGAGGAGAAGATGAAGTTTTGTTC
TCACATAGGCAACAAGAAAGAGACAATTCGTCTGAAGTTTTTGATCAGCCCCGAAGTCAA
TCACCGAAGACGCTAGAGCAGAAGCTTGGGAACTCAAAACGAAAGAAACGACACCATGTC
TCAATCATGGGGGATGAGTGCATTGATGTAAGACAGAAAGATGATCACTTCTCTACCCAA
CCCATTAGGAGATCCTTCTCACTGGATTCTGCAGCTGATCGACAGCTTTACATAACTGTC
CAAGCAATTGTCCAACAAAATGGGCATAATGGAGAGGTTAGTACTAATGAAGAATGTAGT
GCCAGAGTCTGCAAATCTTTCTTCCCGTTTGGACGAGTCAGGGGATCAAGAAATGCTGTT
CTTCCTGTTGAATTTGAGTTATAG

Peptide Sequence

PEP ID

Cs5g29920.1
PEP Infomation
Sequence

MAPDHNHFYNQGDQALAPIKSQEMLTNQASLSNSESAFPILAIAILSIMGTAFLLLSYYV
FVSKCCNNWHLIDLLRRFSVLRARQIEEPFIALSPTMWNRGLDDSVIRDIPTFQFKREGE
DMSIYGCVVCLNEFQEQDMLRVLPNCSHAFHLDCIDIWLQSNANCPLCRTSISGTTRYPI
DQIIAPRPSPQGSQQFSESLMGGDDDFVVIELGGEDEVLFSHRQQERDNSSEVFDQPRSQ
SPKTLEQKLGNSKRKKRHHVSIMGDECIDVRQKDDHFSTQPIRRSFSLDSAADRQLYITV
QAIVQQNGHNGEVSTNEECSARVCKSFFPFGRVRGSRNAVLPVEFEL*

Transcript Sequence

Transcript ID

Cs5g29920.1
Transcript Infomation

gene=Cs5g29920 CDS=875-1918
Sequence

CGCCTTGAGAAAATCTTTTAAGTATAGTTTTTGCATGCACATCTGTGAATCTCGAAGGTC
TTGAATAGATTATAATTTAAAGTAGAGAAATCAAAGTGGTAGTTGCTCACTTGCATCCAG
AAAACGTGAATATTAAAAGGCTAAAGTTTAGCTAACAAATTCCTTAATAGCGATTATTAA
TTGCACGTACAATTTTTTTCCTTTGCCTGATCAGTGTTTACAAAAATCAAGAAATTTATG
AATAAAATATTTTGGAGGTAACCCCGATAAATAAAACCGTTCCATTATTTCTCTCTCACA
TTTCTATTTGCAGGGGTCTTCTAATTTCATTTTTCCGATACATATACACCGCGAAAAGAG
GAGTTAAAAATGTATAATGCTTGCTACATTCTGATTTGTATCATAACAGGAAATCTTGGG
ACCTACCAGCGTGCACAAGGTGACTGGATGATCATTCCATTTGAATACCACGAAGTTAAA
TTGGGTTTTGCTTTCTCTACTTAAAAAAATAAAATAAAATAAATAAATAGTTCAAAGGCT
CTCAATTTTCTTGCTTAACATGAAAGTCTCGCCAGCAGCACTTCAGGGCACGTTTACTTT
AAGTGATCTCTTCTTTCGTGTACATGTGCTTCTCAAGATTTTTCATGAATTTTATTCGGG
TGCCCATTTCCAAATCAATAAAATCTCTTACTTTAGCTACTATTTTATTCCGCTTGGGCT
ATGTTAGCAACATTGCCTCTTAGTTTCTCTTTGAAGATAGTCTTTATCTGATTCACATGT
ACGAGTCTCTTTATTTTAACATTTCACTGAATTCATAAGTCAACCTCACATCATCTGCAT
CTACTCCAAAAGACTCCTTTGGGATTGTCTGCTTATGGCCCCTGACCACAACCACTTCTA
TAACCAGGGAGATCAGGCTCTAGCACCCATCAAAAGCCAGGAGATGTTAACAAATCAAGC
TTCATTGTCGAATTCGGAATCTGCTTTTCCTATACTAGCCATTGCTATCCTAAGCATCAT
GGGCACCGCGTTCTTGCTTCTTAGCTACTATGTTTTTGTGAGTAAATGTTGCAATAACTG
GCACCTAATTGATCTGCTGAGAAGATTTTCTGTGTTGCGAGCTAGACAGATTGAAGAACC
ATTTATAGCCCTCTCTCCAACAATGTGGAACCGTGGGCTTGATGATTCTGTCATTCGCGA
TATCCCAACTTTTCAATTCAAAAGAGAAGGTGAGGATATGAGTATATACGGTTGTGTGGT
TTGTTTGAATGAGTTTCAAGAACAAGATATGCTAAGAGTTCTTCCCAACTGCAGTCACGC
ATTCCACTTAGATTGTATTGATATATGGCTTCAGAGCAATGCAAATTGCCCTCTTTGCCG
CACAAGCATTTCAGGAACAACCCGATATCCAATTGATCAAATTATTGCACCGAGACCTTC
ACCTCAGGGCTCACAGCAATTTAGTGAAAGCCTCATGGGTGGTGATGATGATTTTGTGGT
AATTGAATTGGGAGGAGAAGATGAAGTTTTGTTCTCACATAGGCAACAAGAAAGAGACAA
TTCGTCTGAAGTTTTTGATCAGCCCCGAAGTCAATCACCGAAGACGCTAGAGCAGAAGCT
TGGGAACTCAAAACGAAAGAAACGACACCATGTCTCAATCATGGGGGATGAGTGCATTGA
TGTAAGACAGAAAGATGATCACTTCTCTACCCAACCCATTAGGAGATCCTTCTCACTGGA
TTCTGCAGCTGATCGACAGCTTTACATAACTGTCCAAGCAATTGTCCAACAAAATGGGCA
TAATGGAGAGGTTAGTACTAATGAAGAATGTAGTGCCAGAGTCTGCAAATCTTTCTTCCC
GTTTGGACGAGTCAGGGGATCAAGAAATGCTGTTCTTCCTGTTGAATTTGAGTTATAGTG
TGAGACTGTTCAATTTGAATACTGCTTGTTTAGTTTCTTTTCATCTTTTTTTTTTTTGAG
ATGTTAGGTTTTTGAAGATGACATTGAACTGTTGCTTGGCAACAATCTGATGAGTGTAGG
GTGACTTTGGATTGATTTTTACATTGGGTGAAAAGTTGAAACAATTGCGATTCTTACTGA
AATGTAGGAATGGGTGTGGAATTATTGCTTACGCCACTATGGTTGGATAAGACTTCTTAT
TCTATAATAAGTATCTTCTTCTTCATGAATGAGAATGATTGCTCATCAGAGCCGGGAAAA
GAAGGCCGGCCTGATATAGTGGGAGCCAGAGAAGAGGGACCAAACAATGAGTAATCATAA
GTGAAACATATAAAGTCTCCTTTAGGAATGGTCACCATTCTCTTTTGCCTTGTAGTTATT
ATTCTGATGTTG