Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g29330.1
CDS Infomation

gene=Cs5g29330
Sequence

ATGCAAATGATGGTACCGACACGTCGTTTCGCTGTCGTGCTCGTCCTCCTCCTCGTCGTT
CTGCTTGGAGTCCTGCGCGATGCCTCCGCGAAAGGCGGCGAGTTCACCGGGGACTACCCC
AAGTTGTCCGGAATCATAATTCCAGGCTTTGCGTCGACTCAGCTGAGAGCATGGTCAATC
CTCGACTGTCCGTACTCTCCTCTCGATTTCAACCCTCTCGACCTCGTCTGGCTCGACACT
ACCAAACTTCTTTCTGCTGTGAACTGTTGGCTTAAGTGCATGACACTAGATCCTTACAAT
CAAACAGATAATCCCGAATGCAAGTCTCGACCTGATAGTGGTCTTTCTGCAATTACAGAA
CTTGATCCAGGTTATATAACAGGTCCACTGTCATCAGTGTGGAAAGAATGGGTTAAGTGG
TGCATTGAGTTTGGTATAGAGGCTAATTCAATCATTGCCGCTCCATATGATTGGAGATTG
TCACCGTCAAAGCTCGAGGAGAGAGACCTTTATTTTCACAAACTAAAGTTGACATTTGAA
ACTGCCCTTAAACTTCGTGGTGGCCCCTCATTAGTTCTTGCTCATTCATTGGGTAATAAT
GTGTTTCGTTACTTTCTGGAGTGGCTAAAGTTAGAAATTCCCCCAAAACAATATATCAAA
TGGCTGGATGAACACATTCATGCCTATTTCGCTGTAGGATCTCCTTTTCTTGGTGCAACT
CAAACAGTCAAAGCAACACTTTCTGGTGAAACATTTGGCCTCCCAGTTTCTGAGGGAACA
GCTCGATCGATGTTCAGTTCTTTTGGTTCGTCATTATGGATGATGCCATTTTCAAAATAT
TGTAGAGCTGATAACAAGTACTGGAAGCATTTTTCCGGGGGTACAAGGAAGGATCATCAC
ATACATCAGTGTGATGAACAAGAATTTCGGTCAAACTATTCTGGATGGCCAACAAATTTA
ATCAATATCGAAATTCCTTCGATACGTGGACTTGAGGCTTATCCATCAGTCTCAGAAGTA
GCTCATAACAACTTTTCCAGCATAGAATGTGGACTTCCTACTCAGTTATCCTTCTCTGCT
CGTGAAATATCAGACGGAACCTTTTTCAAGGCAATCGAGGATTATGATCCAGAAAGCAAG
AGGCTTCTTCACCTATTAGAGAAGTCATATCATGGTGATCCTGTTCTGAATCCTCTCACA
CCCTGGGACAGACCACCTATAAAAAATATATTTTGCATCTATGGAATAGACTCAAAGACT
GAGGTGGGATACTATTTTGCACCTAGTGGCAAGCCTTACCCTGATAATTGGATCATAACA
GATGTCATTTACGAAATTGAAGGATCTCTCTTCTCAAGGTCAGGTAATTTGGTTGAAGGA
AATCCAGGACCAACCAGTGGGGATGAGACGGTACCATACCATTCTCTCTCTTGGTGCAAA
AACTGGCTTGGGCCCAAGGTGAACATAACAAGGGCTCCTCAGTCTGAGCACGATGGATCT
GACATACAAGTTGAATTGAATGTAGAACATCAAGATGAAGCAGACATTGTTCCCAACATG
ACAAGGTCACCAAGGGTCAAGTACATAACCTATTATGAAGATTCTGAAAGTATCCCAGGA
AGGAAGACAGCTGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATTGTTAGATCCCCA
GTTCTAATGCGGGAAGTGTGGCTCCAGATGTGGCATGATACTCGTCCTGATGCAACGTTA
AAATTTGTTACGAAAGCTAAGCGCGGACCTCTAAGGGATGAGGACTGTTATTGGGATTAC
GGGAAAGCTCGATGCGCATGGCCTGAATACTGCGAGTACAGGTATAATTTTGGGGATGTT
CACCTAGGACAGAGCTGTAGGATAAAGAATTCTCCAACCTATCTACTCTCGCATTATGTA
TAA

Peptide Sequence

PEP ID

Cs5g29330.1
PEP Infomation
Sequence

MQMMVPTRRFAVVLVLLLVVLLGVLRDASAKGGEFTGDYPKLSGIIIPGFASTQLRAWSI
LDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMTLDPYNQTDNPECKSRPDSGLSAITE
LDPGYITGPLSSVWKEWVKWCIEFGIEANSIIAAPYDWRLSPSKLEERDLYFHKLKLTFE
TALKLRGGPSLVLAHSLGNNVFRYFLEWLKLEIPPKQYIKWLDEHIHAYFAVGSPFLGAT
QTVKATLSGETFGLPVSEGTARSMFSSFGSSLWMMPFSKYCRADNKYWKHFSGGTRKDHH
IHQCDEQEFRSNYSGWPTNLINIEIPSIRGLEAYPSVSEVAHNNFSSIECGLPTQLSFSA
REISDGTFFKAIEDYDPESKRLLHLLEKSYHGDPVLNPLTPWDRPPIKNIFCIYGIDSKT
EVGYYFAPSGKPYPDNWIITDVIYEIEGSLFSRSGNLVEGNPGPTSGDETVPYHSLSWCK
NWLGPKVNITRAPQSEHDGSDIQVELNVEHQDEADIVPNMTRSPRVKYITYYEDSESIPG
RKTAVWELDKANHRNIVRSPVLMREVWLQMWHDTRPDATLKFVTKAKRGPLRDEDCYWDY
GKARCAWPEYCEYRYNFGDVHLGQSCRIKNSPTYLLSHYV*

Transcript Sequence

Transcript ID

Cs5g29330.1
Transcript Infomation

gene=Cs5g29330 CDS=216-2138
Sequence

AATGCCGCAGGTCTAAGACCAGATGAAGTGCTATTACCTATACGGCATCGTCTATAGATC
TTTATCTCAGCAGCGGCACGATGTTGACTAACGAAGGGCAAAGGCCACTATAGGAAATAA
AAAGATTTTCCCCTATATCATGGAAATGCCAACTCCCAACGACTGGACCGTCATTGCAAT
ACAAGGAGCGACGACGCTGACCCTCTCTCTGAACAATGCAAATGATGGTACCGACACGTC
GTTTCGCTGTCGTGCTCGTCCTCCTCCTCGTCGTTCTGCTTGGAGTCCTGCGCGATGCCT
CCGCGAAAGGCGGCGAGTTCACCGGGGACTACCCCAAGTTGTCCGGAATCATAATTCCAG
GCTTTGCGTCGACTCAGCTGAGAGCATGGTCAATCCTCGACTGTCCGTACTCTCCTCTCG
ATTTCAACCCTCTCGACCTCGTCTGGCTCGACACTACCAAACTTCTTTCTGCTGTGAACT
GTTGGCTTAAGTGCATGACACTAGATCCTTACAATCAAACAGATAATCCCGAATGCAAGT
CTCGACCTGATAGTGGTCTTTCTGCAATTACAGAACTTGATCCAGGTTATATAACAGGTC
CACTGTCATCAGTGTGGAAAGAATGGGTTAAGTGGTGCATTGAGTTTGGTATAGAGGCTA
ATTCAATCATTGCCGCTCCATATGATTGGAGATTGTCACCGTCAAAGCTCGAGGAGAGAG
ACCTTTATTTTCACAAACTAAAGTTGACATTTGAAACTGCCCTTAAACTTCGTGGTGGCC
CCTCATTAGTTCTTGCTCATTCATTGGGTAATAATGTGTTTCGTTACTTTCTGGAGTGGC
TAAAGTTAGAAATTCCCCCAAAACAATATATCAAATGGCTGGATGAACACATTCATGCCT
ATTTCGCTGTAGGATCTCCTTTTCTTGGTGCAACTCAAACAGTCAAAGCAACACTTTCTG
GTGAAACATTTGGCCTCCCAGTTTCTGAGGGAACAGCTCGATCGATGTTCAGTTCTTTTG
GTTCGTCATTATGGATGATGCCATTTTCAAAATATTGTAGAGCTGATAACAAGTACTGGA
AGCATTTTTCCGGGGGTACAAGGAAGGATCATCACATACATCAGTGTGATGAACAAGAAT
TTCGGTCAAACTATTCTGGATGGCCAACAAATTTAATCAATATCGAAATTCCTTCGATAC
GTGGACTTGAGGCTTATCCATCAGTCTCAGAAGTAGCTCATAACAACTTTTCCAGCATAG
AATGTGGACTTCCTACTCAGTTATCCTTCTCTGCTCGTGAAATATCAGACGGAACCTTTT
TCAAGGCAATCGAGGATTATGATCCAGAAAGCAAGAGGCTTCTTCACCTATTAGAGAAGT
CATATCATGGTGATCCTGTTCTGAATCCTCTCACACCCTGGGACAGACCACCTATAAAAA
ATATATTTTGCATCTATGGAATAGACTCAAAGACTGAGGTGGGATACTATTTTGCACCTA
GTGGCAAGCCTTACCCTGATAATTGGATCATAACAGATGTCATTTACGAAATTGAAGGAT
CTCTCTTCTCAAGGTCAGGTAATTTGGTTGAAGGAAATCCAGGACCAACCAGTGGGGATG
AGACGGTACCATACCATTCTCTCTCTTGGTGCAAAAACTGGCTTGGGCCCAAGGTGAACA
TAACAAGGGCTCCTCAGTCTGAGCACGATGGATCTGACATACAAGTTGAATTGAATGTAG
AACATCAAGATGAAGCAGACATTGTTCCCAACATGACAAGGTCACCAAGGGTCAAGTACA
TAACCTATTATGAAGATTCTGAAAGTATCCCAGGAAGGAAGACAGCTGTTTGGGAGCTTG
ATAAAGCAAATCACAGGAACATTGTTAGATCCCCAGTTCTAATGCGGGAAGTGTGGCTCC
AGATGTGGCATGATACTCGTCCTGATGCAACGTTAAAATTTGTTACGAAAGCTAAGCGCG
GACCTCTAAGGGATGAGGACTGTTATTGGGATTACGGGAAAGCTCGATGCGCATGGCCTG
AATACTGCGAGTACAGGTATAATTTTGGGGATGTTCACCTAGGACAGAGCTGTAGGATAA
AGAATTCTCCAACCTATCTACTCTCGCATTATGTATAAACTGGAAGATCAAACACGTCCA
CATTGTTGCTAATTGTTGCCATGACTGGTGTTTCCCATGCATAAGGGATTTGATCTAGTC
TCTTTGGAAAATGAAGTCTTTTCTTGTATGCTAAACACAAGTAGGATTTGTCTCTGGAAG
CCACAGAGTCGGCAGGAGTTGTATTTGGAAATATCAGCTTCCTCGATCATTCATCTTCAG
GTTGCCACTGAACTTGATTTGCTTCATCACCAATCAGCTTTCTGCAAAACCATATATTTA
CTGCCCAACTCCAGTTAAACCATCATCAACGCAATGTAGATTTAGATGCTAATCAAGAAG
TTTGTTGACGGAGTTACTCTCGAGCATTCAGGTACAGAGAAGTCGACGGTCGTAACGGCC
ACCTGTTGAATAAAACATTAAATGATTTTGGGTTGTATAATGAATAATGAATCAATTTTC
GTGTAATTCGTAGTTTCGTAGACTAGTGTAAAACCTTTGTATCTTTAACTCATTTTACAA
CATAAGCAATTATTCTTTTTACCTG