Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g28780.1
CDS Infomation

gene=Cs5g28780
Sequence

ATGGGAGATGTTGATCCAGCCTTCATTCAACCCCCTGAATTCAGACCAAAGGTTCAAAAC
AACATGGAAATAGATGATGAAATCCCAGTTATTGATCTCTCTACCGACCCCAAACAACTT
GTCTTGGAAGTTGGCCATGCATGTCAGAAGTGGGGATTTTTTCAAGTCATCAATCATGGG
GCGCCATCAGAATTAAAGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGATCAACCA
ATAGAGGAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCATGACCAG
GAGCATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTTTTGGTTGCAAGATCCA
ACTTTTCTCCCAGCTTCTCCTGAGCCTGATGATAAGGAGCTGAGGAGGCTCACTAACCAA
TGGCCTGAGTTCCCTCTTGGATTTAGGGAGTTATGTGAGGATTATGCTAGGGAGGTGGAA
AAGCTAGCTTACAAGTTACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGATCGG
TTGCAAGGCTATTTTAAAGAACAAACAACCTTTCTGCGATTCAACTACTATCCTCCTTGC
CCTTATCCTGAGCTAGCTCTGGGCGTCGGTCCACACAAAGATGGAGGTGCCTTAACGGTA
CTTGCTCAAGATGACGTTGGTGGACTTCAAGTAAGGGGGAAATCAGATGGAGAGTGGATT
CCTGTTAAACCAATCCCAGATGCCTATATTATTAACATTGGTGATGCCACTCAGGTTTGG
AGCAATGATAAATATGAGAGTCCAGAGCACAGAGTGGTGGTCAACACTGAGAAGGAGAGG
TTTTCGATTCCATTCTTCTTCTTCCCCGCCCACCACGCCATGTTGAAGCCATTCGATGAG
ATTGTAAACGAGCAAAATCCTGCCAGGTATAGGGAATTCAACTGGGGAAAGTTTGTTGTT
GCCAGAAATCGAAGTGATTACAAGAAACAAAATGTCGAAAACATACAGATTAGGCATTTC
AGGGTGGTGGACTGA

Peptide Sequence

PEP ID

Cs5g28780.1
PEP Infomation
Sequence

MGDVDPAFIQPPEFRPKVQNNMEIDDEIPVIDLSTDPKQLVLEVGHACQKWGFFQVINHG
APSELKARIEKAAKEFFDQPIEEKQKVKRDEVHPMGYHDQEHTKNVRDWKEVFDFWLQDP
TFLPASPEPDDKELRRLTNQWPEFPLGFRELCEDYAREVEKLAYKLLELISLSLGLSADR
LQGYFKEQTTFLRFNYYPPCPYPELALGVGPHKDGGALTVLAQDDVGGLQVRGKSDGEWI
PVKPIPDAYIINIGDATQVWSNDKYESPEHRVVVNTEKERFSIPFFFFPAHHAMLKPFDE
IVNEQNPARYREFNWGKFVVARNRSDYKKQNVENIQIRHFRVVD*

Transcript Sequence

Transcript ID

Cs5g28780.1
Transcript Infomation

gene=Cs5g28780 CDS=357-1391
Sequence

CGCCTGTCTTTTTTTATCCCTCTTCTTCCTAAAACTTGGAGAAGTTTCTTACATTTCTCT
GGCAGATTTGTCAATAATCAGTAAGAGATGAGCATGACTGATGGAAAATATCATAACTAC
CACCTCTAACCAGCAATAAAAAATTTACACACGTTACAGAAGTTTCCAAACCAACCCCAC
CAACCAACAATTTTTTTTTTTTTTCCTTTTTTCATACTGAAAAATGTCCATGTTCATTGT
ACATATTTTAACACTACACTAAGATTATTAAACTACCTTTGTTTTGTTTCTTGAAGAAAG
GCAAGTTCTCCCACACACACAATCACAAACAGAAATATAATCTGCTGGTTTCAATCATGG
GAGATGTTGATCCAGCCTTCATTCAACCCCCTGAATTCAGACCAAAGGTTCAAAACAACA
TGGAAATAGATGATGAAATCCCAGTTATTGATCTCTCTACCGACCCCAAACAACTTGTCT
TGGAAGTTGGCCATGCATGTCAGAAGTGGGGATTTTTTCAAGTCATCAATCATGGGGCGC
CATCAGAATTAAAGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGATCAACCAATAG
AGGAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCATGACCAGGAGC
ATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTTTTGGTTGCAAGATCCAACTT
TTCTCCCAGCTTCTCCTGAGCCTGATGATAAGGAGCTGAGGAGGCTCACTAACCAATGGC
CTGAGTTCCCTCTTGGATTTAGGGAGTTATGTGAGGATTATGCTAGGGAGGTGGAAAAGC
TAGCTTACAAGTTACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGATCGGTTGC
AAGGCTATTTTAAAGAACAAACAACCTTTCTGCGATTCAACTACTATCCTCCTTGCCCTT
ATCCTGAGCTAGCTCTGGGCGTCGGTCCACACAAAGATGGAGGTGCCTTAACGGTACTTG
CTCAAGATGACGTTGGTGGACTTCAAGTAAGGGGGAAATCAGATGGAGAGTGGATTCCTG
TTAAACCAATCCCAGATGCCTATATTATTAACATTGGTGATGCCACTCAGGTTTGGAGCA
ATGATAAATATGAGAGTCCAGAGCACAGAGTGGTGGTCAACACTGAGAAGGAGAGGTTTT
CGATTCCATTCTTCTTCTTCCCCGCCCACCACGCCATGTTGAAGCCATTCGATGAGATTG
TAAACGAGCAAAATCCTGCCAGGTATAGGGAATTCAACTGGGGAAAGTTTGTTGTTGCCA
GAAATCGAAGTGATTACAAGAAACAAAATGTCGAAAACATACAGATTAGGCATTTCAGGG
TGGTGGACTGATCATGGCAGAGCAAAGTTGTTGATTATTTTAGCAATTATAACTCTTTTA
GGAGTTTGTTATATCATGCATGCCTGCAGATTAAAGAATAAGGCTTATGTTACAACTTGT
TGCTCACAAGCTTAGCTTTCGAACTTGGTGGTTACTTAATGTTGTATTGGAACAGAATCA
TTGTATGTGAATGTCCGCATTTGTTTCTGAATCTGCATGACTTGTTGAGAGCTTTTATTT
TC