Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g27990.1
CDS Infomation

gene=Cs5g27990
Sequence

ATGGACAACAAGCATCAGCATCCGCAGCCTCAGCCCCAGCTTTCCTTGGCCAAGTCTTCG
CGCCAGCGATGCAATGAATGGATTTTTCGGGATGTTCCAAGTGATATAACAATTGATGTA
AACGGAGGGACGTTTGCATTACATAAGTTCCCACTTGTCTCTCGAAGTGGGCGTATCCGG
AAGTTAGTCGCGGAACATAGGGATTCTGATATCTCAAGGATCGAGCTTCTTAATCTACCA
GGAGGTGCCGAAACATTTGAATTGGCAGCAAAGTTCTGTTATGGCATTAACTTTGAAATT
ACGTCAGCAAACGTGGCTCAGCTATGTTGCGTTTCTGATTATCTCGAAATGACTGAGGAT
TTTTCGAAAGATAATCTTGGCTCTCGAGCTGAAGAGTATATTGATTGTATCGTCTGCAAG
AACCTCGAAATGTGTGTTGAAGTCCTCCAACAGTGCGAGAGCCTACTCCCTCTTGCCGAC
GAGTTAAAGATAGTCAGTCGTTGCATAGATGCCGTAGCCTCTAAGGCTTGCGCAGAGCAA
ATTGCTTCGAGTTTCTCGCGCCTGGAGTACAGCAGCTCAGGGAGGCTTCACATGAACAAG
CATACCAAATGTGAGGGAGACTGGTGGATAGAAGATCTTTCTGTTCTTCGGTTTGACTTG
TACCAAAGAGTCATGACAGCCATGAAGTGTCGAGGGGTCCGCCCCGAGAGTATCGGTGCA
TCTCTAATGAATTATGCGCAGAAGGAGTTGACGAAGAAATCCAGCCTATGGAATCCAACA
ACCCAGGCTAAGGTTGATTTGGTTTCAGTTCCAAGTGGCCATGAAAGACAAGTGGTGGAG
ACAATCATCGGCCTTTTGCCCGTCGAGAAGCTCGCTGTTCCCATCAATTTCCTATTTGGG
CTTCTGCGAAGCGCAGTGATGCTTGATTGCACAGTCGCTTGTAGGCTTGATTTGGAGAGA
AGGATTGCATCCCAGCTGGATATTGCTGCTCTTGATGACCTTTTAATCCCGTCCTTCCGG
CATGCTGGCGATACCTTATTCGATGTTGACACAGTTCACAGGATTTTGGTAAATTTTGCA
CAGCAAGATGATAGTGAAGATGAAATGGATGATGCATCTGTTTTTGAGTCTGACAGTCCT
CATTCACCATCCCAAACTGCTTTGTTGAAAGTCGCAAAATTGGTGGACAATTACCTTGCT
GAAATTGCCCCGGATGCAAATCTCAAGCTTGCCAAGTTCATGGTCATCGCAGAGACTTTA
CCGTCACATGCACGCACTGTTCACGATGGGCTGTATCGTGCCATTGATATTTACTTGAAG
GCTCATCAGAATTTATCAGATTCCGACAAGAAGAGGCTGTGTAAAATGATTGATTTTCAA
AAGCTCTCACAAGAAGCAGGTGCACATGCGGCACAAAATGAGCGCCTCCCTCTCCAATCT
ATTGTTCAAGTGCTCTACTTTGAGCAGTTAAGGCTCCGTAATGCCTTGTCCTGCTCTTAC
GGTGATGAAGAACACAAGCCAGTGCACCAGTCTTGGCGGATCAGCAGTGGTGCTCTCAGT
GCAGCAATGTCTCCGCGAGACAACTATGCATCATTGAGGCGAGAAAACAGAGAGCTAAAA
CTAGAGTTAGCTCGTTTAAGGATGAGATTAAATGATCTGGAGAAAGAACACGTATGTATG
AAGAGGGATATGGTGAAGTCTCATTCTCGTAAATTTATGAGTTCTTTCTCAAGGAAAATT
GGTAAGCTGAGCTTCTTCGGACACAGTTCCTCACGGGGTTCAAGTTCCCCCTCAAAGAAT
TCCTACAGAACCGATTCTAAGGTGATTGAGAGAACATGTGCCAGCACGGATTAG

Peptide Sequence

PEP ID

Cs5g27990.1
PEP Infomation
Sequence

MDNKHQHPQPQPQLSLAKSSRQRCNEWIFRDVPSDITIDVNGGTFALHKFPLVSRSGRIR
KLVAEHRDSDISRIELLNLPGGAETFELAAKFCYGINFEITSANVAQLCCVSDYLEMTED
FSKDNLGSRAEEYIDCIVCKNLEMCVEVLQQCESLLPLADELKIVSRCIDAVASKACAEQ
IASSFSRLEYSSSGRLHMNKHTKCEGDWWIEDLSVLRFDLYQRVMTAMKCRGVRPESIGA
SLMNYAQKELTKKSSLWNPTTQAKVDLVSVPSGHERQVVETIIGLLPVEKLAVPINFLFG
LLRSAVMLDCTVACRLDLERRIASQLDIAALDDLLIPSFRHAGDTLFDVDTVHRILVNFA
QQDDSEDEMDDASVFESDSPHSPSQTALLKVAKLVDNYLAEIAPDANLKLAKFMVIAETL
PSHARTVHDGLYRAIDIYLKAHQNLSDSDKKRLCKMIDFQKLSQEAGAHAAQNERLPLQS
IVQVLYFEQLRLRNALSCSYGDEEHKPVHQSWRISSGALSAAMSPRDNYASLRRENRELK
LELARLRMRLNDLEKEHVCMKRDMVKSHSRKFMSSFSRKIGKLSFFGHSSSRGSSSPSKN
SYRTDSKVIERTCASTD*

Transcript Sequence

Transcript ID

Cs5g27990.1
Transcript Infomation

gene=Cs5g27990 CDS=169-2022
Sequence

CTATGCTTTGAGTACCACCATTTTGACAAAAATGGTAGAAGAAGAGATTAACAAACAGCA
ACATCTCCAACACCAACTGGGTCTTTGCCTTTCTCTCATTTTCACTCTCTTAACCCCACC
TCACTATCTTCTTCTTTACTCTTTCTTAACACAGTGTCTCTTACTTTCATGGACAACAAG
CATCAGCATCCGCAGCCTCAGCCCCAGCTTTCCTTGGCCAAGTCTTCGCGCCAGCGATGC
AATGAATGGATTTTTCGGGATGTTCCAAGTGATATAACAATTGATGTAAACGGAGGGACG
TTTGCATTACATAAGTTCCCACTTGTCTCTCGAAGTGGGCGTATCCGGAAGTTAGTCGCG
GAACATAGGGATTCTGATATCTCAAGGATCGAGCTTCTTAATCTACCAGGAGGTGCCGAA
ACATTTGAATTGGCAGCAAAGTTCTGTTATGGCATTAACTTTGAAATTACGTCAGCAAAC
GTGGCTCAGCTATGTTGCGTTTCTGATTATCTCGAAATGACTGAGGATTTTTCGAAAGAT
AATCTTGGCTCTCGAGCTGAAGAGTATATTGATTGTATCGTCTGCAAGAACCTCGAAATG
TGTGTTGAAGTCCTCCAACAGTGCGAGAGCCTACTCCCTCTTGCCGACGAGTTAAAGATA
GTCAGTCGTTGCATAGATGCCGTAGCCTCTAAGGCTTGCGCAGAGCAAATTGCTTCGAGT
TTCTCGCGCCTGGAGTACAGCAGCTCAGGGAGGCTTCACATGAACAAGCATACCAAATGT
GAGGGAGACTGGTGGATAGAAGATCTTTCTGTTCTTCGGTTTGACTTGTACCAAAGAGTC
ATGACAGCCATGAAGTGTCGAGGGGTCCGCCCCGAGAGTATCGGTGCATCTCTAATGAAT
TATGCGCAGAAGGAGTTGACGAAGAAATCCAGCCTATGGAATCCAACAACCCAGGCTAAG
GTTGATTTGGTTTCAGTTCCAAGTGGCCATGAAAGACAAGTGGTGGAGACAATCATCGGC
CTTTTGCCCGTCGAGAAGCTCGCTGTTCCCATCAATTTCCTATTTGGGCTTCTGCGAAGC
GCAGTGATGCTTGATTGCACAGTCGCTTGTAGGCTTGATTTGGAGAGAAGGATTGCATCC
CAGCTGGATATTGCTGCTCTTGATGACCTTTTAATCCCGTCCTTCCGGCATGCTGGCGAT
ACCTTATTCGATGTTGACACAGTTCACAGGATTTTGGTAAATTTTGCACAGCAAGATGAT
AGTGAAGATGAAATGGATGATGCATCTGTTTTTGAGTCTGACAGTCCTCATTCACCATCC
CAAACTGCTTTGTTGAAAGTCGCAAAATTGGTGGACAATTACCTTGCTGAAATTGCCCCG
GATGCAAATCTCAAGCTTGCCAAGTTCATGGTCATCGCAGAGACTTTACCGTCACATGCA
CGCACTGTTCACGATGGGCTGTATCGTGCCATTGATATTTACTTGAAGGCTCATCAGAAT
TTATCAGATTCCGACAAGAAGAGGCTGTGTAAAATGATTGATTTTCAAAAGCTCTCACAA
GAAGCAGGTGCACATGCGGCACAAAATGAGCGCCTCCCTCTCCAATCTATTGTTCAAGTG
CTCTACTTTGAGCAGTTAAGGCTCCGTAATGCCTTGTCCTGCTCTTACGGTGATGAAGAA
CACAAGCCAGTGCACCAGTCTTGGCGGATCAGCAGTGGTGCTCTCAGTGCAGCAATGTCT
CCGCGAGACAACTATGCATCATTGAGGCGAGAAAACAGAGAGCTAAAACTAGAGTTAGCT
CGTTTAAGGATGAGATTAAATGATCTGGAGAAAGAACACGTATGTATGAAGAGGGATATG
GTGAAGTCTCATTCTCGTAAATTTATGAGTTCTTTCTCAAGGAAAATTGGTAAGCTGAGC
TTCTTCGGACACAGTTCCTCACGGGGTTCAAGTTCCCCCTCAAAGAATTCCTACAGAACC
GATTCTAAGGTGATTGAGAGAACATGTGCCAGCACGGATTAGGCAATTCACACCAGCAAT
CTTTTCTCTGTAATTGCCGAGGAACTGCAAGCCTTGCTCTGTGACCTCTTTGTTCTAGTT
AATTTCCATCTTGGCTTCTCTCTGTATATGAGTTGTGATGCTTTGACTTAGCAACGTCCG
CACTCCTCTTGAATGCAAATTGTGTTTTTTTCGCAGTGCGACTTCGACAATGTCTGCATT
TTTTATTTATCTTAAAAACAATTTCATGTAAACTTGTGCAAAATGTTTATTATAGATATT
TTGATTAACAAAG