Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g27790.4
CDS Infomation

gene=Cs5g27790
Sequence

ATGAGCGAAATCTCACCCGAAGTACCCGATAATAGGCAAGACGCACCTTCACACGTGGAC
CCGAACAGCACCCGCATCACCAAACCTGGAGTGAAGCGGCTCGTCCTGACTCTCTCTGTA
CTCTTCTCCTTAGTCCTAGGCTTTCCGTTCTTATGGAAGTCGGTCGAAATCTACCGCTCT
TCGCTTCCGTTCGGCGAAATATCGGAAATGGAATCGAATCCATCGCTATCATTCCCCTGC
CGTTTTCAAGCCGTATTTATTAACTTCAATTCGAATCCCAGCCCTAACCATCTCCAACTG
TCAATCCTCGACAAAATTACGGAACTGACCTCGAATTCCTCCCAATGTGGCGCCTGTGCT
AACGATCTCGCTCTTTCCGTCACTGTTGACTCCATTTCTAGTTGCACGCAAACGCATCCA
ACTGATAACAGTAACTACTACCGCTGTGGCGCAATCAGCGCCGTTGACTTTGATTTTAGT
AACGATGATGACGATGGTGTTGATGAGTTGTTGGAGTCTGTTCTGGGAGTGAAGAATGTC
TACAGCGTTGTGGTGGTGAATGGAGGTGGAGAGGGGATTAGGGCGGTGGTGGGGAAGTAC
AGGCACGCGTGGATTGTGGGGAGTGTTGAAGAGGAGGAGGAGGAGAGTGTATTGGTTTCG
AGAGTTGCGGAGATTTTTGTCAAAATGTTTGTGAATGGAGGGACAGAAAATGGGTTGATT
CATGGGGAGTTTATGCCTGTGGGTGCTGATCGTAGGATTGTGCTCTCCTTTAATTTGCTT
AATGCCGAACCCAACGATTGGGTTTACGATTGGGATTTCCAAAGAGTAGATGAAACTCTA
CTGGCCCCTATAATTAAGGTTTTGGGACCTATTGCAAATATCAGTGTTGAAAGTCAGGTT
TTATACCATACGCCAAAATCCTCATTCTCATACTGGGATGAAAAGTGGAAAAGCTACATC
TTTAGTACCAAGGATCTTCCCTTCTTTGTGAATTCAAACGAGTGGCACTTGGATACTTCT
ATTGCAGCAGGCGGACGGTCAAAGATATTGCAATTTGTGGTATATGTACCATCTGCAAAG
GAGTGCCCTCTTTCCCTTCTGCTTCCAACTGGAGAGATTTCTAAGACAAATGGTTTTATA
TCTCCTATGTGGGGAGGTGTTGTTGTTTGGAACCCTCCTGGCTGTTTGAATTCTGAAACT
AATCATCCTTCCAGGCATACTATGTCTCGTGAGGATCTTCAGGCGGTTTTTGAAGTTTTC
ATGGGGCAGTTCCGGCAGCTATTCGGCCTTAAATCCAATAACCTTTACATTGGTGCCTCT
GGCACATACCACCTTTTGCCTAGTGGAAAAGGCTTCACAGAATGTGTCCTCAGGACAAGC
AAGATCCCTAGCAGAGGATGCCTTTTTTCACCCGTCTATCATGTCCATCAGTTACTACTC
ATTTGA

Peptide Sequence

PEP ID

Cs5g27790.4
PEP Infomation
Sequence

MSEISPEVPDNRQDAPSHVDPNSTRITKPGVKRLVLTLSVLFSLVLGFPFLWKSVEIYRS
SLPFGEISEMESNPSLSFPCRFQAVFINFNSNPSPNHLQLSILDKITELTSNSSQCGACA
NDLALSVTVDSISSCTQTHPTDNSNYYRCGAISAVDFDFSNDDDDGVDELLESVLGVKNV
YSVVVVNGGGEGIRAVVGKYRHAWIVGSVEEEEEESVLVSRVAEIFVKMFVNGGTENGLI
HGEFMPVGADRRIVLSFNLLNAEPNDWVYDWDFQRVDETLLAPIIKVLGPIANISVESQV
LYHTPKSSFSYWDEKWKSYIFSTKDLPFFVNSNEWHLDTSIAAGGRSKILQFVVYVPSAK
ECPLSLLLPTGEISKTNGFISPMWGGVVVWNPPGCLNSETNHPSRHTMSREDLQAVFEVF
MGQFRQLFGLKSNNLYIGASGTYHLLPSGKGFTECVLRTSKIPSRGCLFSPVYHVHQLLL
I*

Transcript Sequence

Transcript ID

Cs5g27790.4
Transcript Infomation

gene=Cs5g27790 CDS=131-1576
Sequence

TCTTGGGTCAAAATCATTCGCCAGGTCAGCAGTGAGTTAGTAAGTTAACGGGAAGCACCG
AAGCACGAACACGAGCTGAACTCAATTCAATCGAACCAGAGGCAAGAGCTTCATCCAGTG
CAAAAGAATAATGAGCGAAATCTCACCCGAAGTACCCGATAATAGGCAAGACGCACCTTC
ACACGTGGACCCGAACAGCACCCGCATCACCAAACCTGGAGTGAAGCGGCTCGTCCTGAC
TCTCTCTGTACTCTTCTCCTTAGTCCTAGGCTTTCCGTTCTTATGGAAGTCGGTCGAAAT
CTACCGCTCTTCGCTTCCGTTCGGCGAAATATCGGAAATGGAATCGAATCCATCGCTATC
ATTCCCCTGCCGTTTTCAAGCCGTATTTATTAACTTCAATTCGAATCCCAGCCCTAACCA
TCTCCAACTGTCAATCCTCGACAAAATTACGGAACTGACCTCGAATTCCTCCCAATGTGG
CGCCTGTGCTAACGATCTCGCTCTTTCCGTCACTGTTGACTCCATTTCTAGTTGCACGCA
AACGCATCCAACTGATAACAGTAACTACTACCGCTGTGGCGCAATCAGCGCCGTTGACTT
TGATTTTAGTAACGATGATGACGATGGTGTTGATGAGTTGTTGGAGTCTGTTCTGGGAGT
GAAGAATGTCTACAGCGTTGTGGTGGTGAATGGAGGTGGAGAGGGGATTAGGGCGGTGGT
GGGGAAGTACAGGCACGCGTGGATTGTGGGGAGTGTTGAAGAGGAGGAGGAGGAGAGTGT
ATTGGTTTCGAGAGTTGCGGAGATTTTTGTCAAAATGTTTGTGAATGGAGGGACAGAAAA
TGGGTTGATTCATGGGGAGTTTATGCCTGTGGGTGCTGATCGTAGGATTGTGCTCTCCTT
TAATTTGCTTAATGCCGAACCCAACGATTGGGTTTACGATTGGGATTTCCAAAGAGTAGA
TGAAACTCTACTGGCCCCTATAATTAAGGTTTTGGGACCTATTGCAAATATCAGTGTTGA
AAGTCAGGTTTTATACCATACGCCAAAATCCTCATTCTCATACTGGGATGAAAAGTGGAA
AAGCTACATCTTTAGTACCAAGGATCTTCCCTTCTTTGTGAATTCAAACGAGTGGCACTT
GGATACTTCTATTGCAGCAGGCGGACGGTCAAAGATATTGCAATTTGTGGTATATGTACC
ATCTGCAAAGGAGTGCCCTCTTTCCCTTCTGCTTCCAACTGGAGAGATTTCTAAGACAAA
TGGTTTTATATCTCCTATGTGGGGAGGTGTTGTTGTTTGGAACCCTCCTGGCTGTTTGAA
TTCTGAAACTAATCATCCTTCCAGGCATACTATGTCTCGTGAGGATCTTCAGGCGGTTTT
TGAAGTTTTCATGGGGCAGTTCCGGCAGCTATTCGGCCTTAAATCCAATAACCTTTACAT
TGGTGCCTCTGGCACATACCACCTTTTGCCTAGTGGAAAAGGCTTCACAGAATGTGTCCT
CAGGACAAGCAAGATCCCTAGCAGAGGATGCCTTTTTTCACCCGTCTATCATGTCCATCA
GTTACTACTCATTTGAGCACTGCTTTGCCATCTATTCGCCATTCTTTTTGCCTGTTTCGA
TGCATGTCCTCCTTGCCGCTTTAAGAGAATGGAAGAGATACAAGCAAGAAAAAGCAAAAT
ACACAGCGTGGAAAGCCAAAGTGAAGGTAGAGTCTTGATCATTACCTTGACCTGAGCAAC
ATCTAGTAATAGAGAGGAGGGAGAGAATGCAGAGAGGCCAGCAGGCATCAGATGGTAAAT
TCAGCCGGCATTGCGTAGTGCGCCACAGCTCCATACTGCGAAGTGAACATTATTCCATTT
AATCTCAATAACACTTGAATGATTTTCTCATCAATCAATGATGTTGGTCGGCGTTTTGAA
GATTCATATTGTAGAAATACTGAGATTATGGTGGGTCTATATGGTTGGTTCTGAGTATCT
GTGGGATTCTTGCCAAACAATGAGCGAGATGGATTTCTTGCCCCCTCGGCGTTTCGGTTA
ATTATTTCTAAATTGAGTGTAATTTTATGAAGTTTGCAGTTAATTGGACAGTCTCTCATG
AAAAACTTGCTTTGCAAGTGTACCTGCCACTCCATTTCCCATAGATGAA