Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g24290.1
CDS Infomation

gene=Cs5g24290
Sequence

ATGGCACCTGGGTTAGTTTCTAGTCTTCAAAATTTATGGCCATTTTCGTTTTTCAAGTAT
GATGATTTGAGAGCATCTAAGGAACTAGTTAACCGACTTTCAATACCTGAGCATACAAAA
GAGTTTGTGTTTGCGATTCGAGAACCCAAATCGCAATCTGTGATATATATACTTTGTGCC
CAGAATTTGTCCGAGAGATCAGCTATAGACACTGAGTGTCTTATCAGGGAGGTAAGGCCA
GATGCTGTTGTGGCTCAAGTGGGTGTTTTGAGTGAGGTACAGTGCGAAGAGAGTGAATTA
GGAGATAACGGTAATGACCCTCTTCCGACTTCTTCATTTGGGGTGCTTAAACGATGCTTT
GTTGATAAGGTTAATAAGGAGACATATGAGAACGTGGCTGGAAATTTGGTTTTGAGAGAG
ATTTTTGGGATTGGTTTTCATGGCCATTTATTTGCTGCCAAGAGAGTGGCCAAGGAGGTT
GGTTCGTCCTTTATGGTGGTTGAATCACGTATAGTTAGAAACTCAATTCCTGATAATCCA
TCAGGAGAAGTTGATGTCATGAACAAGGTTCAAGGTTTAGTTAGTAGTTTGGTTCCACAG
AAAGTGGGTTTTGTTGTATCATCAAGGTCAAGGAGTTTTCGCATCACTAATGACATTGAG
TCACAAATGGTGAAATTGTTATCTTCAAATCTTGATTTTTTAGGATCGAGGTTTAGTGGG
TCAAAGGAAGTTCAGCCCAGAAGCAGTTATCATGTCCCTTCGTTTGCCCAATCCGTTTAT
CCGTTACTTGTTGATCTGCATGATGTATTCATAGATCTCCCATCAATAACTAGGGCTCTA
GCTTTTGCACAAAAAATGTTTTATGATGTGAACAGAGGCGAAGCTGTGGATACTGAGGTT
ATTTCTGAAGTTTGCACTTTTCGGATTGCAGTTGAGGGTCTGAGAATTGCTCTTAACAAT
GCTAGCCGCCTACCAATCAACAAATTGAGGGATTCCAACTTATCTAATATTGATTTCTCG
GAGCTTGCACTAGAGGACAAATCAAGTGCACTCCTTGCGCAGGCTCTTCAGAACCAAGCT
AAAAAGTTCAAGACTGTGGTAGCTGTAGTGGATGCTAGTTGCCTAGCTGGGCTTAGGAAA
CATTGGAACACTCCTCTTCCTCATGAGGTCGAGGATTTGGTTGGACAGCTAGTGACAAGT
TGTGGAGATGATGATGAAAATTCTAACCTGAATAGAAAGTGGTTGTTATCTAGTAAGCCC
GTTGTGGCTGTGGGTGCTGGAGCATCAGCAGTTGTAGGAGCTTCGTCGCTCTCTAAAGTT
CTTCCTGCATCAACCTTCATGAAGGTTGTATCATTCAAAGCTCCTGCTTCACTTAAGCTT
ATTATGACCCAAACCCAGAAGGCAGTCGCTATAGCTCTTGGCAAAACTAAGGTGGTAGCC
CCAGGACTGGTAACTTCTGGATCCAATACATCACCTATCTTGAAGGCAGCTGCATCTGCT
GAGAAAATCAGGACAGTGACCCACAGTGTTATAGCCTCCATGGAGAAAACAAGTTTCTCA
GCGATGAGAACAGCATTCTATGAAATAATGAGGAAAAGACGGGTAAAACCGATTGGTGTC
CTACCATGGGCAACATTTGGGTGTAGTGTTGCAACTTGCTCGGGGTTGCTTATGTATGGT
GATGGGATAGAATGTGTTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCCAGTTTGGGA
CGTGGGATTCAAAGTTTACATCTGGCATCTCAGGCAGTGACGCAGACAAACGGCACTAGG
ATCCAAAAATCTATCGAAACTCTGATGCACAATTTGAAGAGAGTGAAGGTTCAATAG

Peptide Sequence

PEP ID

Cs5g24290.1
PEP Infomation
Sequence

MAPGLVSSLQNLWPFSFFKYDDLRASKELVNRLSIPEHTKEFVFAIREPKSQSVIYILCA
QNLSERSAIDTECLIREVRPDAVVAQVGVLSEVQCEESELGDNGNDPLPTSSFGVLKRCF
VDKVNKETYENVAGNLVLREIFGIGFHGHLFAAKRVAKEVGSSFMVVESRIVRNSIPDNP
SGEVDVMNKVQGLVSSLVPQKVGFVVSSRSRSFRITNDIESQMVKLLSSNLDFLGSRFSG
SKEVQPRSSYHVPSFAQSVYPLLVDLHDVFIDLPSITRALAFAQKMFYDVNRGEAVDTEV
ISEVCTFRIAVEGLRIALNNASRLPINKLRDSNLSNIDFSELALEDKSSALLAQALQNQA
KKFKTVVAVVDASCLAGLRKHWNTPLPHEVEDLVGQLVTSCGDDDENSNLNRKWLLSSKP
VVAVGAGASAVVGASSLSKVLPASTFMKVVSFKAPASLKLIMTQTQKAVAIALGKTKVVA
PGLVTSGSNTSPILKAAASAEKIRTVTHSVIASMEKTSFSAMRTAFYEIMRKRRVKPIGV
LPWATFGCSVATCSGLLMYGDGIECVAESLPAAPSIASLGRGIQSLHLASQAVTQTNGTR
IQKSIETLMHNLKRVKVQ*

Transcript Sequence

Transcript ID

Cs5g24290.1
Transcript Infomation

gene=Cs5g24290 CDS=130-1986
Sequence

AACAGGACAGCACCAGATTATTCTAACAACAAATCGAGTAGAAAGGGGGGAGAGAGGGAG
AGAGAGAGAGAGAGCGGGTGATTGATTTCATCGCCTAGTCAATATCTTCAGGTTATTGAT
GTTGATGTAATGGCACCTGGGTTAGTTTCTAGTCTTCAAAATTTATGGCCATTTTCGTTT
TTCAAGTATGATGATTTGAGAGCATCTAAGGAACTAGTTAACCGACTTTCAATACCTGAG
CATACAAAAGAGTTTGTGTTTGCGATTCGAGAACCCAAATCGCAATCTGTGATATATATA
CTTTGTGCCCAGAATTTGTCCGAGAGATCAGCTATAGACACTGAGTGTCTTATCAGGGAG
GTAAGGCCAGATGCTGTTGTGGCTCAAGTGGGTGTTTTGAGTGAGGTACAGTGCGAAGAG
AGTGAATTAGGAGATAACGGTAATGACCCTCTTCCGACTTCTTCATTTGGGGTGCTTAAA
CGATGCTTTGTTGATAAGGTTAATAAGGAGACATATGAGAACGTGGCTGGAAATTTGGTT
TTGAGAGAGATTTTTGGGATTGGTTTTCATGGCCATTTATTTGCTGCCAAGAGAGTGGCC
AAGGAGGTTGGTTCGTCCTTTATGGTGGTTGAATCACGTATAGTTAGAAACTCAATTCCT
GATAATCCATCAGGAGAAGTTGATGTCATGAACAAGGTTCAAGGTTTAGTTAGTAGTTTG
GTTCCACAGAAAGTGGGTTTTGTTGTATCATCAAGGTCAAGGAGTTTTCGCATCACTAAT
GACATTGAGTCACAAATGGTGAAATTGTTATCTTCAAATCTTGATTTTTTAGGATCGAGG
TTTAGTGGGTCAAAGGAAGTTCAGCCCAGAAGCAGTTATCATGTCCCTTCGTTTGCCCAA
TCCGTTTATCCGTTACTTGTTGATCTGCATGATGTATTCATAGATCTCCCATCAATAACT
AGGGCTCTAGCTTTTGCACAAAAAATGTTTTATGATGTGAACAGAGGCGAAGCTGTGGAT
ACTGAGGTTATTTCTGAAGTTTGCACTTTTCGGATTGCAGTTGAGGGTCTGAGAATTGCT
CTTAACAATGCTAGCCGCCTACCAATCAACAAATTGAGGGATTCCAACTTATCTAATATT
GATTTCTCGGAGCTTGCACTAGAGGACAAATCAAGTGCACTCCTTGCGCAGGCTCTTCAG
AACCAAGCTAAAAAGTTCAAGACTGTGGTAGCTGTAGTGGATGCTAGTTGCCTAGCTGGG
CTTAGGAAACATTGGAACACTCCTCTTCCTCATGAGGTCGAGGATTTGGTTGGACAGCTA
GTGACAAGTTGTGGAGATGATGATGAAAATTCTAACCTGAATAGAAAGTGGTTGTTATCT
AGTAAGCCCGTTGTGGCTGTGGGTGCTGGAGCATCAGCAGTTGTAGGAGCTTCGTCGCTC
TCTAAAGTTCTTCCTGCATCAACCTTCATGAAGGTTGTATCATTCAAAGCTCCTGCTTCA
CTTAAGCTTATTATGACCCAAACCCAGAAGGCAGTCGCTATAGCTCTTGGCAAAACTAAG
GTGGTAGCCCCAGGACTGGTAACTTCTGGATCCAATACATCACCTATCTTGAAGGCAGCT
GCATCTGCTGAGAAAATCAGGACAGTGACCCACAGTGTTATAGCCTCCATGGAGAAAACA
AGTTTCTCAGCGATGAGAACAGCATTCTATGAAATAATGAGGAAAAGACGGGTAAAACCG
ATTGGTGTCCTACCATGGGCAACATTTGGGTGTAGTGTTGCAACTTGCTCGGGGTTGCTT
ATGTATGGTGATGGGATAGAATGTGTTGCTGAATCTCTTCCAGCAGCTCCTTCAATCGCC
AGTTTGGGACGTGGGATTCAAAGTTTACATCTGGCATCTCAGGCAGTGACGCAGACAAAC
GGCACTAGGATCCAAAAATCTATCGAAACTCTGATGCACAATTTGAAGAGAGTGAAGGTT
CAATAGAGTAAGAACTCTATTTATAGCATTTTTTTATACTACCCAATATGATTGGAGATA
AAATAGATTTCTTATGTACATATAGAATGCACAACAAGGTTACTGTATCATCATTGGTGT
TTGTATTTGGCTAGAGCAATCGACAAAAATACCTAAAATGAACAATACCAAAAGACCAGA
ATAATGCTCTACATATACATACATGTAAAATATTGCCATTGTGTGACTCGCCGCCCAAGC
TACACTTCTACAAAAGGGGCAAAAATAATTTTCACTTATTGGGTATTTAGATTGGAACTT
TTTTTTTTTGGTCCCAAATTTTTA