Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g22040.1
CDS Infomation

gene=Cs5g22040
Sequence

ATGGGCAAGAGAAGAAAGGGTCAAAAGCCAGGCAACAAGAAGTCTAATAGAAGATTGCGA
GATGAAGATTTGAATCCTGAAGATATGGATGACGAAATTGATGCTTTTCACAAGCAGAGG
GATGTTATTCCTTTGGATGTAAATGGTGATGTTGGGGACTCTGATGACGATAATGAGCAT
CCGGTGTTTGATTTTGAGGATGATGAAGATGATGAAGATGATGAAGACGATGATGTCAAT
GATGCTCAAGATACTGGATTGGCTGCAAAGATTAAAAAGCAACAAAAATTTTTGCGGGCA
AAGTATGGTGGCATTGAGGATGAGATGCATGATGATGAGGAAGAGGATAAGGAAGGAAAA
AAAGATTTATGGGGTGGGATAAAGAACCAATATTATTATGGTGACAATCGTGATTTTGAA
CTGCAATCAAGTGATGATGATTCCCCTGCTTTAGAGGAACAATTGGTGGTAGAGGAGCTG
GAAAAAAGAGCAACCTCTTTAGCAATGGAAGATTTTGGCCTTCAAGACGCTGGAGATAGT
GAAGATAATGAAGATGAGAGTGACAAGGGATTAACCTTAGAAGAAATCTCGATTAAAGGG
AAAAGTACAACAAAGCCTTGGGCAAGCAAAGAAGCTGTAGATGATGCTGTTACAAGTTAT
GAGGAGGTCAAGAAAGACTTGAATGCATTGTCAAAGGAGGAGCAAATGGATGTGGTATAC
AGTTCTGCTCCAGAGTTGGTTGGTTTGCTGTCAGAACTGAATGATGCGCTTGAACAGCTT
GAAATAAAAGTTAACCCGTTGTTAAACAAGGTGAAAGAGCAGGAGATCATGCTGGAAGGT
GGGATGCGCTATTTGGAGGTGAAGCAACTTCTACTGCTGGCCTATTGCCAAGCCATAACC
TTTTATCTTCTTCTCAAGTCTGAAGGGGAGCCAGTTCGTGATCATCCTGTCATAGCTCGC
CTTGTAGAGATCAAGGGATTGCTGGATAAGATTAAACAACTCGATGAGAATCTTCCATCT
GAGTTAGATGAGATTTTGAAGAATGACCATTCAGCTGAAATTGCGGCAAAGTTGGTTAGA
GAGAATGCTAAAATGGCATCCAATTCTGCTGCTGATAATCATCACAATTCATCTTCTGTC
TCAGCTGATACAGATCATGGAGCAGCGGCTTTAGATGTAAATGAATTGAAAATGGAGGAC
ATTTTGAGGGATCATGATGATAAAGGACAGAAATGCAAGCATCAGAATGATCAAGTTGGT
GTACAGAGCATGGAAATGTTAAAAGTAAGAGCCGCCCTTGAGGAAAAATTGAAGCGGAAG
GGAGTCTTTAGATCAATTGCTCCAATGCCTGGGAAAAGAAAGAAACATCTGAAACCAGTG
AACGGACAGCTTGAAACATTTGATGATTTTGATGACGATGCTACGGGTGTTGAGAGGGGA
ACTGTAGGAATGAGTAATGGGCATGTAAGCTCATTGCGATCAAGTAAAATTTCCCAACTT
GTCCCTGCTCAGCCAAGTAAGCCAAAGGTTGTTTCTGGTGATGATGATCTTCCTAAGAGG
GACGACATTGGAGAAAGGCGGAGGAAACATGAGCTCAGAGTGCTGGCAGGAGCAGGAATT
AAGTCTGAGGATGATGCTTGGGATGAACTTGGCACATTTAAGACTGACAAAGATGATGAT
ATGGAGGTTGGGGATGATGGGGAAACCAGGGAGTCTGAAGATGAATTTTACGAACAAGTA
AAACGTCACCGAACTGAAAAACTAGCTGCTAAATCTGAGATTTATACAAGGACCCCAGCA
ACGCCATCTTTGCCTGAAACTGTAGATGGAAAGCGGCATATCACTTATCAGATGGAGAAG
AACAGGGGTTTGACACGTGCACGCAAGAAGCTAACTAAGAATCCAAGAAAGAAATACAGA
TCGAAGCATGAGAAAGCAGTTGTGCGTCGTAAAGGGCAGGTTCGGGATATCAGGAAACCC
ACTGGTCCTTATGGTGGAGAAGCCACTGGCATTAACCCAGGAATCAGTCGAAGCACAAGA
TTCAAAAATTAG

Peptide Sequence

PEP ID

Cs5g22040.1
PEP Infomation
Sequence

MGKRRKGQKPGNKKSNRRLRDEDLNPEDMDDEIDAFHKQRDVIPLDVNGDVGDSDDDNEH
PVFDFEDDEDDEDDEDDDVNDAQDTGLAAKIKKQQKFLRAKYGGIEDEMHDDEEEDKEGK
KDLWGGIKNQYYYGDNRDFELQSSDDDSPALEEQLVVEELEKRATSLAMEDFGLQDAGDS
EDNEDESDKGLTLEEISIKGKSTTKPWASKEAVDDAVTSYEEVKKDLNALSKEEQMDVVY
SSAPELVGLLSELNDALEQLEIKVNPLLNKVKEQEIMLEGGMRYLEVKQLLLLAYCQAIT
FYLLLKSEGEPVRDHPVIARLVEIKGLLDKIKQLDENLPSELDEILKNDHSAEIAAKLVR
ENAKMASNSAADNHHNSSSVSADTDHGAAALDVNELKMEDILRDHDDKGQKCKHQNDQVG
VQSMEMLKVRAALEEKLKRKGVFRSIAPMPGKRKKHLKPVNGQLETFDDFDDDATGVERG
TVGMSNGHVSSLRSSKISQLVPAQPSKPKVVSGDDDLPKRDDIGERRRKHELRVLAGAGI
KSEDDAWDELGTFKTDKDDDMEVGDDGETRESEDEFYEQVKRHRTEKLAAKSEIYTRTPA
TPSLPETVDGKRHITYQMEKNRGLTRARKKLTKNPRKKYRSKHEKAVVRRKGQVRDIRKP
TGPYGGEATGINPGISRSTRFKN*

Transcript Sequence

Transcript ID

Cs5g22040.1
Transcript Infomation

gene=Cs5g22040 CDS=133-2184
Sequence

ATTGCTAACCCTAGTTGCAAAACCTTTGGTTATTCTTGTTCTTTTACAGGAACTACAGAA
GGGTTTAAGAGATTCCCAATTTCAGAGTCGAATGAAACAAATTGCTTTTCTCCAAAACGT
TAATTTGAAGTCATGGGCAAGAGAAGAAAGGGTCAAAAGCCAGGCAACAAGAAGTCTAAT
AGAAGATTGCGAGATGAAGATTTGAATCCTGAAGATATGGATGACGAAATTGATGCTTTT
CACAAGCAGAGGGATGTTATTCCTTTGGATGTAAATGGTGATGTTGGGGACTCTGATGAC
GATAATGAGCATCCGGTGTTTGATTTTGAGGATGATGAAGATGATGAAGATGATGAAGAC
GATGATGTCAATGATGCTCAAGATACTGGATTGGCTGCAAAGATTAAAAAGCAACAAAAA
TTTTTGCGGGCAAAGTATGGTGGCATTGAGGATGAGATGCATGATGATGAGGAAGAGGAT
AAGGAAGGAAAAAAAGATTTATGGGGTGGGATAAAGAACCAATATTATTATGGTGACAAT
CGTGATTTTGAACTGCAATCAAGTGATGATGATTCCCCTGCTTTAGAGGAACAATTGGTG
GTAGAGGAGCTGGAAAAAAGAGCAACCTCTTTAGCAATGGAAGATTTTGGCCTTCAAGAC
GCTGGAGATAGTGAAGATAATGAAGATGAGAGTGACAAGGGATTAACCTTAGAAGAAATC
TCGATTAAAGGGAAAAGTACAACAAAGCCTTGGGCAAGCAAAGAAGCTGTAGATGATGCT
GTTACAAGTTATGAGGAGGTCAAGAAAGACTTGAATGCATTGTCAAAGGAGGAGCAAATG
GATGTGGTATACAGTTCTGCTCCAGAGTTGGTTGGTTTGCTGTCAGAACTGAATGATGCG
CTTGAACAGCTTGAAATAAAAGTTAACCCGTTGTTAAACAAGGTGAAAGAGCAGGAGATC
ATGCTGGAAGGTGGGATGCGCTATTTGGAGGTGAAGCAACTTCTACTGCTGGCCTATTGC
CAAGCCATAACCTTTTATCTTCTTCTCAAGTCTGAAGGGGAGCCAGTTCGTGATCATCCT
GTCATAGCTCGCCTTGTAGAGATCAAGGGATTGCTGGATAAGATTAAACAACTCGATGAG
AATCTTCCATCTGAGTTAGATGAGATTTTGAAGAATGACCATTCAGCTGAAATTGCGGCA
AAGTTGGTTAGAGAGAATGCTAAAATGGCATCCAATTCTGCTGCTGATAATCATCACAAT
TCATCTTCTGTCTCAGCTGATACAGATCATGGAGCAGCGGCTTTAGATGTAAATGAATTG
AAAATGGAGGACATTTTGAGGGATCATGATGATAAAGGACAGAAATGCAAGCATCAGAAT
GATCAAGTTGGTGTACAGAGCATGGAAATGTTAAAAGTAAGAGCCGCCCTTGAGGAAAAA
TTGAAGCGGAAGGGAGTCTTTAGATCAATTGCTCCAATGCCTGGGAAAAGAAAGAAACAT
CTGAAACCAGTGAACGGACAGCTTGAAACATTTGATGATTTTGATGACGATGCTACGGGT
GTTGAGAGGGGAACTGTAGGAATGAGTAATGGGCATGTAAGCTCATTGCGATCAAGTAAA
ATTTCCCAACTTGTCCCTGCTCAGCCAAGTAAGCCAAAGGTTGTTTCTGGTGATGATGAT
CTTCCTAAGAGGGACGACATTGGAGAAAGGCGGAGGAAACATGAGCTCAGAGTGCTGGCA
GGAGCAGGAATTAAGTCTGAGGATGATGCTTGGGATGAACTTGGCACATTTAAGACTGAC
AAAGATGATGATATGGAGGTTGGGGATGATGGGGAAACCAGGGAGTCTGAAGATGAATTT
TACGAACAAGTAAAACGTCACCGAACTGAAAAACTAGCTGCTAAATCTGAGATTTATACA
AGGACCCCAGCAACGCCATCTTTGCCTGAAACTGTAGATGGAAAGCGGCATATCACTTAT
CAGATGGAGAAGAACAGGGGTTTGACACGTGCACGCAAGAAGCTAACTAAGAATCCAAGA
AAGAAATACAGATCGAAGCATGAGAAAGCAGTTGTGCGTCGTAAAGGGCAGGTTCGGGAT
ATCAGGAAACCCACTGGTCCTTATGGTGGAGAAGCCACTGGCATTAACCCAGGAATCAGT
CGAAGCACAAGATTCAAAAATTAGATGCCGTTGTTTTGATTCAATTTTCCTTGTTGATAA
TCACAAGAGGTAGTATTGAATCAATGAATCTTGTAACGTCGGGGTGGTGTTCGTTGCAAC
CCAAAATTTTGTTGTAGCTATGTACGCATATTTGTCAGTTGAAACATAAACAGGTGATTT
CATTTTTCCATTTCAAATTTGGCTATTATTATTTGTTTTTTTCCTGCCCCCATATTTTTC
AGAAAGCAAAATCCTTGTATATTTTATTTACATAACTATTGAAAATCTCTATGTTGAGTA
TATTGAAATTGTACGTTTGAGTTAAAATTATTTGGGTTT