Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g14370.1
CDS Infomation

gene=Cs5g14370
Sequence

ATGGCGGCAGCAACTACTACTTCTTCACTCATAGACTTGGGCTCTTGTAAAGATTCTTGT
TCTTCTCCTTCTTTTTCTTCTTCAAGAGCAAGAATTGCTTTTAGTTTAAAAAAGCCCACC
GAAATCACTTGCTCTCTTCAAACACCTTCCATTCTTCATTTCCCCAAGCAGTCCCCAAAA
TACCCTCCATCACCTGCAGCTACCCCTCCTCCATCTTCTCCTCCTCTTACAACTAAGCAG
CAACCCAAGGAAAATGACAATTTCGCCCCTTCAAAATGGAACTTCTTACAAAAAGCAGCA
GCTTTAGCCTTGGACGCAGTCGAAAACGCATTGGTTTCTCAAGAGCGTCAGCATCCTCTC
CCCAAAACAGCCGACCCCACCGTCCAAATCGCCGGAAACTTCTCTCCGGTGCCCGAAAAA
CCCGTCTGCCAGAACCTTCCCACTACCGGAAAGGTCCCCGACTGCATTCAAGGCGTCTAC
GTCAGAAACGGAGCCAACCCACTTCACGAACCGGTCGCCGGCCACCATTTCTTCGACGGA
GACGGCATGGTTCATGCAGTCAAATTCAACAAAGGCTCTGTCAGCTATTCTTGTCGTTTC
ACTGAAACAAACCGTTTTGTTCAAGAACGTAGCTTAGGCCGCCCCGTATTCCCCAAAGCC
ATTGGCGAGCTTCACGGCCACACGGGCATCGCAAGATTGCTTCTATTCTACAGCAGAGCG
CTCTTCGGTCTCGTTGACCCCAGCCACGGCACTGGCGTTGCCAACGCCGGCCTTGTTTAC
TTCAACAACCGTTTGTTGGCCATGTCTGAAGATGACTTGCCTTATCACGTGCGCGTCACT
CCATCCGGCGAGCTCAAAACAGTCGGCCGTTTCGACTTCAGCGGCCAGCTCAAGTCCACG
ATGATAGCTCATCCGAAAGTTGATCCCGTGACGGGTGATTTGTTTGCTCTGAGTTATGAC
GTTGTCAAGAAGCCTTACTTGAAGTACTTTCAGTTTTCGCCCCAAGGGATCAAGTCTCCG
GACGTTGAGATTCCCCTTGAGGAGCCTACAATGATGCATGATTTCGCAATCACTGAGAAT
TTTGTTGTGGTGCCTGACCAGCAAGTGGTGTTCAAGTTGAAAGAGATGATCCGAGGTGGC
TCCCCTGTGATTTATGACAAGAACAAGGTGTCAAGATTTGGGATTTTGGACAAGAATGCC
ACCGATGCTTCCAAAATGAAGTGGATTGACGCCCCTGATTGCTTCTGTTTCCATCTTTGG
AATGCTTGGGAAGAGCCTGAGAGGGATGAAGTTGTTGTAATTGGGTCCTGTATGACTCCT
GCCGACTCCATTTTCAACGAATGTGATGAGAGTCTGAAGAGTGTTTTGTCCGAAATTAGA
CTCAATCTAAAGACCGGCGAGTCCACTCGCCGCCCCATAATCTCCGAGGATGAGCAAGTG
AACTTGGAAGCCGGAATGGTGAACAGAAACTTGCTCGGAAGAAAGACCCGTTTCGCGTAC
TTAGCCCTCGCCGAGCCATGGCCTAAAGTTTCAGGTTTTGCCAAAGTTGATCTCTTAACC
GGACAAGTAAACAAGTTTATTTACGGAGATCAAAGGTACGGGGGCGAGCCTTTGTTCTTT
CCGAGAGACCCCAATTCGGAGAATGAGGATGATGGCTACATTCTCGCTTTTGTACACGAT
GAAAAGGAGTGGAAATCAGAGCTGCAAATTGTTAACGCAATGACTCTGGAGCTTGAAGCT
ACAGTTAAGCTTCCATCTCGAGTTCCTTATGGCTTCCACGGGACGTTCATAGGCGCGAAA
GATTTGGCCAAGCAGGCCTAA

Peptide Sequence

PEP ID

Cs5g14370.1
PEP Infomation
Sequence

MAAATTTSSLIDLGSCKDSCSSPSFSSSRARIAFSLKKPTEITCSLQTPSILHFPKQSPK
YPPSPAATPPPSSPPLTTKQQPKENDNFAPSKWNFLQKAAALALDAVENALVSQERQHPL
PKTADPTVQIAGNFSPVPEKPVCQNLPTTGKVPDCIQGVYVRNGANPLHEPVAGHHFFDG
DGMVHAVKFNKGSVSYSCRFTETNRFVQERSLGRPVFPKAIGELHGHTGIARLLLFYSRA
LFGLVDPSHGTGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGELKTVGRFDFSGQLKST
MIAHPKVDPVTGDLFALSYDVVKKPYLKYFQFSPQGIKSPDVEIPLEEPTMMHDFAITEN
FVVVPDQQVVFKLKEMIRGGSPVIYDKNKVSRFGILDKNATDASKMKWIDAPDCFCFHLW
NAWEEPERDEVVVIGSCMTPADSIFNECDESLKSVLSEIRLNLKTGESTRRPIISEDEQV
NLEAGMVNRNLLGRKTRFAYLALAEPWPKVSGFAKVDLLTGQVNKFIYGDQRYGGEPLFF
PRDPNSENEDDGYILAFVHDEKEWKSELQIVNAMTLELEATVKLPSRVPYGFHGTFIGAK
DLAKQA*

Transcript Sequence

Transcript ID

Cs5g14370.1
Transcript Infomation

gene=Cs5g14370 CDS=336-2156
Sequence

TGGTCGTGTCAAAGAAATAAGCAACACCTCGTTTTAATCACTAAATTCAAAATCTACTCT
TAAAATCGAACACGTGGTCTTCTTTTACATGTCTAGAGTGGACCTGCTTCTGCTTCTGCT
TTCCCCCTTTAAATACCCCCCCTTCCACCTCTCCCCCAAACAACACTCAAAAGACTCTCA
ATAGTCAATACTCAAAAGCACTTAAACGTTAAGCGCTTCTCTGAAAATCTTACAGTCCTA
CTTAACTCGCATTACAAGTTTACAACTACTCCCGCTGCTACTACTAGAAGTGCTTCTTCT
TCAAATATACTTGCGAAAATAGAGAATCAATCCTCATGGCGGCAGCAACTACTACTTCTT
CACTCATAGACTTGGGCTCTTGTAAAGATTCTTGTTCTTCTCCTTCTTTTTCTTCTTCAA
GAGCAAGAATTGCTTTTAGTTTAAAAAAGCCCACCGAAATCACTTGCTCTCTTCAAACAC
CTTCCATTCTTCATTTCCCCAAGCAGTCCCCAAAATACCCTCCATCACCTGCAGCTACCC
CTCCTCCATCTTCTCCTCCTCTTACAACTAAGCAGCAACCCAAGGAAAATGACAATTTCG
CCCCTTCAAAATGGAACTTCTTACAAAAAGCAGCAGCTTTAGCCTTGGACGCAGTCGAAA
ACGCATTGGTTTCTCAAGAGCGTCAGCATCCTCTCCCCAAAACAGCCGACCCCACCGTCC
AAATCGCCGGAAACTTCTCTCCGGTGCCCGAAAAACCCGTCTGCCAGAACCTTCCCACTA
CCGGAAAGGTCCCCGACTGCATTCAAGGCGTCTACGTCAGAAACGGAGCCAACCCACTTC
ACGAACCGGTCGCCGGCCACCATTTCTTCGACGGAGACGGCATGGTTCATGCAGTCAAAT
TCAACAAAGGCTCTGTCAGCTATTCTTGTCGTTTCACTGAAACAAACCGTTTTGTTCAAG
AACGTAGCTTAGGCCGCCCCGTATTCCCCAAAGCCATTGGCGAGCTTCACGGCCACACGG
GCATCGCAAGATTGCTTCTATTCTACAGCAGAGCGCTCTTCGGTCTCGTTGACCCCAGCC
ACGGCACTGGCGTTGCCAACGCCGGCCTTGTTTACTTCAACAACCGTTTGTTGGCCATGT
CTGAAGATGACTTGCCTTATCACGTGCGCGTCACTCCATCCGGCGAGCTCAAAACAGTCG
GCCGTTTCGACTTCAGCGGCCAGCTCAAGTCCACGATGATAGCTCATCCGAAAGTTGATC
CCGTGACGGGTGATTTGTTTGCTCTGAGTTATGACGTTGTCAAGAAGCCTTACTTGAAGT
ACTTTCAGTTTTCGCCCCAAGGGATCAAGTCTCCGGACGTTGAGATTCCCCTTGAGGAGC
CTACAATGATGCATGATTTCGCAATCACTGAGAATTTTGTTGTGGTGCCTGACCAGCAAG
TGGTGTTCAAGTTGAAAGAGATGATCCGAGGTGGCTCCCCTGTGATTTATGACAAGAACA
AGGTGTCAAGATTTGGGATTTTGGACAAGAATGCCACCGATGCTTCCAAAATGAAGTGGA
TTGACGCCCCTGATTGCTTCTGTTTCCATCTTTGGAATGCTTGGGAAGAGCCTGAGAGGG
ATGAAGTTGTTGTAATTGGGTCCTGTATGACTCCTGCCGACTCCATTTTCAACGAATGTG
ATGAGAGTCTGAAGAGTGTTTTGTCCGAAATTAGACTCAATCTAAAGACCGGCGAGTCCA
CTCGCCGCCCCATAATCTCCGAGGATGAGCAAGTGAACTTGGAAGCCGGAATGGTGAACA
GAAACTTGCTCGGAAGAAAGACCCGTTTCGCGTACTTAGCCCTCGCCGAGCCATGGCCTA
AAGTTTCAGGTTTTGCCAAAGTTGATCTCTTAACCGGACAAGTAAACAAGTTTATTTACG
GAGATCAAAGGTACGGGGGCGAGCCTTTGTTCTTTCCGAGAGACCCCAATTCGGAGAATG
AGGATGATGGCTACATTCTCGCTTTTGTACACGATGAAAAGGAGTGGAAATCAGAGCTGC
AAATTGTTAACGCAATGACTCTGGAGCTTGAAGCTACAGTTAAGCTTCCATCTCGAGTTC
CTTATGGCTTCCACGGGACGTTCATAGGCGCGAAAGATTTGGCCAAGCAGGCCTAAATTG
CAAGAATTAATCAAGAACGATCGAAGCTTATTAAGGAGAGATTTACCAGAGGGATGCTTG
CATACACGTCCCCGGAATCTGCTCCTCTGTTTTTAGAATATTTTTTTTTTGTCTATTTGG
GATTTTACAGTGAGAGGTTTTGAGAGAGACCAGCTTGTAGCTTGTTGGTGTAGCTAGCAT
TGGAGCTCAGCTGGTTTCTGCTTATTCTTTCACTATTGTGTATAATAAATTAAGTACATA
AATTACAACAACATATATATATATATATATATATATATTGTATTTCTATATACATATATA
TACGCATATGATCATGTCTCTACCTCTACGTATAATTTATCCTCTGTTTTACTCTGTT