Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g12470.2
CDS Infomation

gene=Cs5g12470
Sequence

ATGTCAAAACGTACGCACACGACGGAGGTGGGGTCCATCGCCTGCACGGATCTCAGCGAC
CTCGGCGCGGGCAAGGAAGGCTGGCTGGTGAACGACCCTAACCTTCTCTGCGCGTTGGAC
ATGCACACCATCGCTCTCGCCAACAGATATCAAACCGTGATTATTAACTGGGCCGACCCG
GAAGGCCTCGTGGCCAAAATCCGACCCGAGCTTTCCCCGATCGCCTCCGAGTACATAACC
GCTATTGAGTGGTTGGTGTTTGAAGAAATGAGAGCCCTTGCCGTTGGGACCTCGAGAGGT
TACTTTTTGGTTTATGATTTGAAAGGTGATCTGGTGCACCGACAGTTGATACATCCCGGA
CGGATTCTAAAGTTGCGAGTCCGTGGAAGTAGGAGAGATTTAACTCAAGATACAGCAGAG
GAGGAGGTTTGTGTTGTAATGCCTGGAGTACTTGCCCGTTTTGATGGTTCTGAGATTCAG
AAAATGCTGCAGCGATGGTTTCAAGACTCAAATTCTAATTTTTGGGATCAGAAGCCGAAA
CAGAGAGATTCAGAGGATTTGGAAAATTCATATGAAAGGTTGCCTCATCAGTTGTGGAAT
GTCAGCAAGTATGGGCCATGTGCCGATGCAGCAATTACTGGTCTAATGCCTCCACCACTG
ATGGAAGTGCAGTCAAGTCAACGTTATTTCTGTGCAGTCACTATTGGAGAGGACTCTGTG
ATTTCAGCATTCAGACTTTCAGAAGACAGAAGCAGGTCCCTGGTTGGAGCTATTCTATCT
AAAGTCGTACCTGCTACATTTTCAACAATATCTTCTTTGTCTAAAATGATATGGCGCAGC
GAACAATCGCCTAAGAAATCAGAACCAAAGCCTCAGTCATTTGCTCGAGCTTCCCCTTTG
ACATGTTTGAAAGATCATCCTAGGAAGGGTGAAAGGCTCACATTATCACCTAGTGGCTCA
TTGGCTGCAATAACAGATTCGCTGGGTCGGATATTGCTATTAGACACTCAGGCACTTGTA
GTAGTTCGATTGTGGAAGGGTTATCGTGATGCTAGCTGCGTTTTCATGGAGATGCTAGTC
AACAAAGATGCTGCAACAAGTTCTGCTTATTATGCACCAGTGAAGAGTGATTATTGCCTT
TGTTTAGCTATTCATGCACCCCGAAAAGGAATTATCGAGGTATGGCAGATGAGAACTGGA
CCACGTCTCTTAACTATTCAGTGCGCCAAAGGTAGCAAAATACTGCAACCCACCTACAGG
TTTGGATCATCAATGGCCTCTTCTCCTTATGTGCCTCTGGAGGTTTTCTTGTTGAATGGA
GACTCTGGACAATTATCGGTTTTGAACCGTTCCCTTAGTTGA

Peptide Sequence

PEP ID

Cs5g12470.2
PEP Infomation
Sequence

MSKRTHTTEVGSIACTDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVIINWADP
EGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPG
RILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPK
QRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSV
ISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPL
TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLV
NKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKILQPTYR
FGSSMASSPYVPLEVFLLNGDSGQLSVLNRSLS*

Transcript Sequence

Transcript ID

Cs5g12470.2
Transcript Infomation

gene=Cs5g12470 CDS=118-1479
Sequence

CATAATAGTCACTTCGGTACCTTCTCTTAGTGGTTAACTTTGCTCGTACTCTTTCTCCGA
TCCATCCATATGGCGTAAACGGGAAACGGTGGAGCCCAATCAAAACGATACCAAAAAATG
TCAAAACGTACGCACACGACGGAGGTGGGGTCCATCGCCTGCACGGATCTCAGCGACCTC
GGCGCGGGCAAGGAAGGCTGGCTGGTGAACGACCCTAACCTTCTCTGCGCGTTGGACATG
CACACCATCGCTCTCGCCAACAGATATCAAACCGTGATTATTAACTGGGCCGACCCGGAA
GGCCTCGTGGCCAAAATCCGACCCGAGCTTTCCCCGATCGCCTCCGAGTACATAACCGCT
ATTGAGTGGTTGGTGTTTGAAGAAATGAGAGCCCTTGCCGTTGGGACCTCGAGAGGTTAC
TTTTTGGTTTATGATTTGAAAGGTGATCTGGTGCACCGACAGTTGATACATCCCGGACGG
ATTCTAAAGTTGCGAGTCCGTGGAAGTAGGAGAGATTTAACTCAAGATACAGCAGAGGAG
GAGGTTTGTGTTGTAATGCCTGGAGTACTTGCCCGTTTTGATGGTTCTGAGATTCAGAAA
ATGCTGCAGCGATGGTTTCAAGACTCAAATTCTAATTTTTGGGATCAGAAGCCGAAACAG
AGAGATTCAGAGGATTTGGAAAATTCATATGAAAGGTTGCCTCATCAGTTGTGGAATGTC
AGCAAGTATGGGCCATGTGCCGATGCAGCAATTACTGGTCTAATGCCTCCACCACTGATG
GAAGTGCAGTCAAGTCAACGTTATTTCTGTGCAGTCACTATTGGAGAGGACTCTGTGATT
TCAGCATTCAGACTTTCAGAAGACAGAAGCAGGTCCCTGGTTGGAGCTATTCTATCTAAA
GTCGTACCTGCTACATTTTCAACAATATCTTCTTTGTCTAAAATGATATGGCGCAGCGAA
CAATCGCCTAAGAAATCAGAACCAAAGCCTCAGTCATTTGCTCGAGCTTCCCCTTTGACA
TGTTTGAAAGATCATCCTAGGAAGGGTGAAAGGCTCACATTATCACCTAGTGGCTCATTG
GCTGCAATAACAGATTCGCTGGGTCGGATATTGCTATTAGACACTCAGGCACTTGTAGTA
GTTCGATTGTGGAAGGGTTATCGTGATGCTAGCTGCGTTTTCATGGAGATGCTAGTCAAC
AAAGATGCTGCAACAAGTTCTGCTTATTATGCACCAGTGAAGAGTGATTATTGCCTTTGT
TTAGCTATTCATGCACCCCGAAAAGGAATTATCGAGGTATGGCAGATGAGAACTGGACCA
CGTCTCTTAACTATTCAGTGCGCCAAAGGTAGCAAAATACTGCAACCCACCTACAGGTTT
GGATCATCAATGGCCTCTTCTCCTTATGTGCCTCTGGAGGTTTTCTTGTTGAATGGAGAC
TCTGGACAATTATCGGTTTTGAACCGTTCCCTTAGTTGAGATTTTAGAAAAGATAACATT
TTTTCCCTGATTGCTTTTTACACAATGATATATTTCTCTGATCTCCATTCGCTGTTTATT
GTATAGATATGTAAGAACACTAATCTTTGGTACTCACGAATGCTGGTGAAAATCTAAAAT
ATTTTCATTCGACAACAACATTTAATCTACATTCCATGACATGAACCCAATGCTATAAAC
AGAACTGAATTATTATTACTGAGGTTTGTATGATTGTATACTGTGACAATGGGTGAGGTT
GAAAATGTGGATACAGATGTTTTAGGCTGTTGATAAATGACAAGGGAAAAGGTGGCATTT
CATATTGTCTAGCTTTTATTGTCAAGATGATGCAGACTTCGCCACTTATATTTATTAAGT
TTTGTGCCACAAGTAATTTTGATATAAGTTACCTCTCTATACTGTTGTCACAATCCAA