Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g06560.1
CDS Infomation

gene=Cs5g06560
Sequence

ATGTCACAAGAGGAAATTGCAAGGGAAGCTATAAAGCACGCTCTCAAGGCGTTGCGGAAA
CGGCATTTAGTGGAAGAAGGCGCTCATGCTCCCGCCATTATCGCTCTTTCAAGGCCGATC
ATTTCTCAGGGATCCGAATGGAAGGAGAAAGCGGATAATCTGGAAACAGAGCTTCAGCAA
TGTTACAAAGCTCAATCTAGGTTATCAGAGCAGCTTGTGGTTGAAGTAGCTGAGTCTAGA
TCTTCTAAAGCTTTATTGCAAGAGAAAGAATCACTGATTACTTCACTACAGGAAGAATTG
ACGCAAATAAGGGATGAATGTTCTCAGTTGAAGACGGAATTGGAAGAAAAGATCAAGGCT
TTGGAATTAGTTGTGAGCGAGAACCAGCAAATCAGAGCACAGCTAGAAGAGATGACTATG
AAAGCTAAAAATGCTGAAGCTGAAAATAAAATGTTAGTTGATAGATGGATGTTGCAAAAG
ATGCAGGACGCTGAACGGCTAAATGAGGCAAATGCACTTTATGAAGATATGATTGATCGG
CTCAAGGCCAGTGGGTTAGAGAAACTTGCTAAACAGCAGGTAGATGGTGTGGTTCGCCGA
AGTGAAGAAGGTGCTGAGTTCTTTGCGGAGTCAACTGTTCCATCTACATGCAAACATAAG
ATCAATGCCCATGAAGGTGGCTGTGCATCCATATTGTTTGAATACAATTCTGCCAGATTG
ATTAGTGGTGGACAGGACAAGTCAATTAAATTGTGGGATACAAACACTGGGTCATTAAGC
AGTACCCTCTATGGTTGCCTTGGCTCAGTTCTTGATCTTGCTATTACCCATGATAATAGA
TCTGTCATTGCTGCAAGTAGCTCAAACAACTTGTATGTTTGGGATGTCAACTCAGGGCGT
GTCCGTCATACTCTCACAGGTCACACAGATAAAGTGTGTGCTGTAGATGTGAGCAAAATT
TCAAGCCGGCATGTCGTAAGTGCAGCTTATGATCGTACTTTAAAAGTGTGGGATTTGCAT
AAAGGTTACTGTGTGAACACAATCATTTTTCACAGCAACTGTAATGCTCTTGCCTTCAGT
ATGGATGGACAGACCATATTTTCTGGTCATATTGATGGGAATCTGCGTTTGTGGGATATT
CAAACAGGAAAGCTACTTAGTGAAGTTGCTGCACATTCACTTGCTGCAGTTACATCTATC
TCTTTGTCGCGAAGTGGAAACATAATACTAACTAGCGGGCGAGACAACTTGCACAACTTA
TTTGATATACGGTCTTTAGAAGTTTGTGGCTCACTAAGAGCAACTGGAAACAGAGTGGCA
TCTAATTGGAGCCGATCCTGCATAAGTCCGGATGAGAGCTATGTTGCTGCTGGCTCAGCT
GATGGATCTGTATATATCTGGTCAATATCTAAAGCTGATATAGTGAGAACGTTGAAGGAG
CACACAGCTCCCGTACTGAGTTGTTCATGGAGTGGGCTTGGAAAACCGCTGGCATCTGCT
GACAAGAATGGAGTTGTTTGTGTTTGGACGTGA

Peptide Sequence

PEP ID

Cs5g06560.1
PEP Infomation
Sequence

MSQEEIAREAIKHALKALRKRHLVEEGAHAPAIIALSRPIISQGSEWKEKADNLETELQQ
CYKAQSRLSEQLVVEVAESRSSKALLQEKESLITSLQEELTQIRDECSQLKTELEEKIKA
LELVVSENQQIRAQLEEMTMKAKNAEAENKMLVDRWMLQKMQDAERLNEANALYEDMIDR
LKASGLEKLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARL
ISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR
VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFS
MDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNL
FDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE
HTAPVLSCSWSGLGKPLASADKNGVVCVWT*

Transcript Sequence

Transcript ID

Cs5g06560.1
Transcript Infomation

gene=Cs5g06560 CDS=159-1691
Sequence

GTCCAATAAAAGTTTATTTACAGGAACACCATTTGATCGTCAATCTCCGTCTATCGACGA
AGAGCACGACTTCTCGGGATGTTTCTTTCTCTCTTGGGGAAACCTAATTCAAAGCGACTC
CTGAATCCTGAAACCAGCTACAATCAGATTCGATCGATATGTCACAAGAGGAAATTGCAA
GGGAAGCTATAAAGCACGCTCTCAAGGCGTTGCGGAAACGGCATTTAGTGGAAGAAGGCG
CTCATGCTCCCGCCATTATCGCTCTTTCAAGGCCGATCATTTCTCAGGGATCCGAATGGA
AGGAGAAAGCGGATAATCTGGAAACAGAGCTTCAGCAATGTTACAAAGCTCAATCTAGGT
TATCAGAGCAGCTTGTGGTTGAAGTAGCTGAGTCTAGATCTTCTAAAGCTTTATTGCAAG
AGAAAGAATCACTGATTACTTCACTACAGGAAGAATTGACGCAAATAAGGGATGAATGTT
CTCAGTTGAAGACGGAATTGGAAGAAAAGATCAAGGCTTTGGAATTAGTTGTGAGCGAGA
ACCAGCAAATCAGAGCACAGCTAGAAGAGATGACTATGAAAGCTAAAAATGCTGAAGCTG
AAAATAAAATGTTAGTTGATAGATGGATGTTGCAAAAGATGCAGGACGCTGAACGGCTAA
ATGAGGCAAATGCACTTTATGAAGATATGATTGATCGGCTCAAGGCCAGTGGGTTAGAGA
AACTTGCTAAACAGCAGGTAGATGGTGTGGTTCGCCGAAGTGAAGAAGGTGCTGAGTTCT
TTGCGGAGTCAACTGTTCCATCTACATGCAAACATAAGATCAATGCCCATGAAGGTGGCT
GTGCATCCATATTGTTTGAATACAATTCTGCCAGATTGATTAGTGGTGGACAGGACAAGT
CAATTAAATTGTGGGATACAAACACTGGGTCATTAAGCAGTACCCTCTATGGTTGCCTTG
GCTCAGTTCTTGATCTTGCTATTACCCATGATAATAGATCTGTCATTGCTGCAAGTAGCT
CAAACAACTTGTATGTTTGGGATGTCAACTCAGGGCGTGTCCGTCATACTCTCACAGGTC
ACACAGATAAAGTGTGTGCTGTAGATGTGAGCAAAATTTCAAGCCGGCATGTCGTAAGTG
CAGCTTATGATCGTACTTTAAAAGTGTGGGATTTGCATAAAGGTTACTGTGTGAACACAA
TCATTTTTCACAGCAACTGTAATGCTCTTGCCTTCAGTATGGATGGACAGACCATATTTT
CTGGTCATATTGATGGGAATCTGCGTTTGTGGGATATTCAAACAGGAAAGCTACTTAGTG
AAGTTGCTGCACATTCACTTGCTGCAGTTACATCTATCTCTTTGTCGCGAAGTGGAAACA
TAATACTAACTAGCGGGCGAGACAACTTGCACAACTTATTTGATATACGGTCTTTAGAAG
TTTGTGGCTCACTAAGAGCAACTGGAAACAGAGTGGCATCTAATTGGAGCCGATCCTGCA
TAAGTCCGGATGAGAGCTATGTTGCTGCTGGCTCAGCTGATGGATCTGTATATATCTGGT
CAATATCTAAAGCTGATATAGTGAGAACGTTGAAGGAGCACACAGCTCCCGTACTGAGTT
GTTCATGGAGTGGGCTTGGAAAACCGCTGGCATCTGCTGACAAGAATGGAGTTGTTTGTG
TTTGGACGTGACAGATCTAACAATATACACACCCATGTAAATATGTTAAAACAGAAGCTG
CAAATCTGGTTCCTAATGCATCTTCAGCGATCATCAAGTTGCTTGAACCGCAGAGATATT
TATTGTATAAAACCAGATCATTACTCATTTAATTGTTCAATTATCTACCAAGAAAGTTGG
GTAGACTGGTTGGTTACTGGTTATTCTTTTACGGAATACAAAGGATTTATTTTGGTTCTT
GATATG