Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g06160.1
CDS Infomation

gene=Cs5g06160
Sequence

ATGAGTACTCCCATGGAAATCACCGTACATAACTCCACAGAAGCTGAGATCTCTGACCAA
GACGGCATCCCCGAGCAAAAAGGCGTCGCCGGCCCTCCCCTGCCTCTTCTCGCCGAAGAC
AAATTTCTCGTATCCGTTGAAGTTTGTTTAAAGCTCTCAAGCACAGCTCGAATAGACGAT
GTTAGGTTAGCTGTTGAAAGAATGCTTGAAAAGAGAAGTTTAAGCTATGTAGATGGGCCG
ATCCCCATCCCTATTGATGATCCGTTTCTTGTCGAAAATGTACAAAGAATCTGTGTTAGT
GATACAGATGAATGGGTAAAGAACCATGATATTCTTTTGTTCTGGCAAGTAAAGCCTGTA
GTTCAAGTCTTTCAGCTTAGTGAGGAAGGACCCTGTGAGGAACTTAGTGGGGATGGCCAG
CTGTCTAGCTTTAATGAATGGATTCTTCCTGCCAAGGAATTTGATGGCATGTGGGAAAGC
CTGATTTATGAATCTGGTCTCAAGCAAAGGTTATTGCACTATGCAGCAAGTGCATTGATG
TTTGCTGAGAAGGGTGTTAATCCTTTCCTCGTGTCATGGAACCGCATTGTCCTGTTACAT
GGACCTCCAGGAACTGGGAAAACGTCATTATGTAAAGCATTGGCTCAAAAACTGTCTATT
CGATTCAGCTCCAGATATCCTCAGTGCCAGTTGGTTGAAGTTAACGCACACTCTTTATTT
AGTAAATGGTTCTCTGAAAGTGGGAAGTTGGTTGCCAAGCTTTTTCAAAAAATTCAAGAA
ATGGTAGAGGAAGAAAACAATCTGGTATTTGTTTTGATTGATGAAGTTGAAAGTCTTGCT
GCTGCTAGAAAGGCTGCTTTGTCTGGTTCTGAACCTTCAGATTCTATTCGGGTTGTCAAT
GCTCTACTAACTCAGATGGACAAACTGAAATCATCACCGAATGTGATAATTTTGACTACA
TCGAATATAACTGCCGCCATTGATATTGCATTTGTTGATCGTGCTGATATCAAAGCGTAT
GTTGGTCCTCCAACACTTCAAGCAAGATACGAAATTTTAAGGTCGTGCTTGCAGGAACTC
ATACGAACAGGAATCATATCAAATTTCCAGGATTGTGATCAGAGCATGCTTCCAAATTTT
TCTATTTTGAAAGAGAAACTCAGTAATCCTGATATTCAAGAGGCTGACAGATCACAGCAC
TTCTATAAACAATTGCTCGAAGCTGCAGAGGCATGCGAGGGGTTGAGCGGAAGATCATTA
AGAAAACTTCCATTCTTGGCACATGCAGCTCTTGCTAACCCTAACGGTTGCGATCCTAGC
AAGTTCTTGCTTACTGTGATAGATACAGCTAGAAAAGAGCGTTCTGAGCTACCTGACTGA

Peptide Sequence

PEP ID

Cs5g06160.1
PEP Infomation
Sequence

MSTPMEITVHNSTEAEISDQDGIPEQKGVAGPPLPLLAEDKFLVSVEVCLKLSSTARIDD
VRLAVERMLEKRSLSYVDGPIPIPIDDPFLVENVQRICVSDTDEWVKNHDILLFWQVKPV
VQVFQLSEEGPCEELSGDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLHYAASALM
FAEKGVNPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLVEVNAHSLF
SKWFSESGKLVAKLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVN
ALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQEL
IRTGIISNFQDCDQSMLPNFSILKEKLSNPDIQEADRSQHFYKQLLEAAEACEGLSGRSL
RKLPFLAHAALANPNGCDPSKFLLTVIDTARKERSELPD*

Transcript Sequence

Transcript ID

Cs5g06160.1
Transcript Infomation

gene=Cs5g06160 CDS=100-1479
Sequence

AAAAAACCCAAATTTTATGTCCCTAGGGTTTGACACAGAATCCAATCCTCTGTGAAGCCG
TTCACATTGTAATCCCTAATCCCGGTTACGCTCACCAAAATGAGTACTCCCATGGAAATC
ACCGTACATAACTCCACAGAAGCTGAGATCTCTGACCAAGACGGCATCCCCGAGCAAAAA
GGCGTCGCCGGCCCTCCCCTGCCTCTTCTCGCCGAAGACAAATTTCTCGTATCCGTTGAA
GTTTGTTTAAAGCTCTCAAGCACAGCTCGAATAGACGATGTTAGGTTAGCTGTTGAAAGA
ATGCTTGAAAAGAGAAGTTTAAGCTATGTAGATGGGCCGATCCCCATCCCTATTGATGAT
CCGTTTCTTGTCGAAAATGTACAAAGAATCTGTGTTAGTGATACAGATGAATGGGTAAAG
AACCATGATATTCTTTTGTTCTGGCAAGTAAAGCCTGTAGTTCAAGTCTTTCAGCTTAGT
GAGGAAGGACCCTGTGAGGAACTTAGTGGGGATGGCCAGCTGTCTAGCTTTAATGAATGG
ATTCTTCCTGCCAAGGAATTTGATGGCATGTGGGAAAGCCTGATTTATGAATCTGGTCTC
AAGCAAAGGTTATTGCACTATGCAGCAAGTGCATTGATGTTTGCTGAGAAGGGTGTTAAT
CCTTTCCTCGTGTCATGGAACCGCATTGTCCTGTTACATGGACCTCCAGGAACTGGGAAA
ACGTCATTATGTAAAGCATTGGCTCAAAAACTGTCTATTCGATTCAGCTCCAGATATCCT
CAGTGCCAGTTGGTTGAAGTTAACGCACACTCTTTATTTAGTAAATGGTTCTCTGAAAGT
GGGAAGTTGGTTGCCAAGCTTTTTCAAAAAATTCAAGAAATGGTAGAGGAAGAAAACAAT
CTGGTATTTGTTTTGATTGATGAAGTTGAAAGTCTTGCTGCTGCTAGAAAGGCTGCTTTG
TCTGGTTCTGAACCTTCAGATTCTATTCGGGTTGTCAATGCTCTACTAACTCAGATGGAC
AAACTGAAATCATCACCGAATGTGATAATTTTGACTACATCGAATATAACTGCCGCCATT
GATATTGCATTTGTTGATCGTGCTGATATCAAAGCGTATGTTGGTCCTCCAACACTTCAA
GCAAGATACGAAATTTTAAGGTCGTGCTTGCAGGAACTCATACGAACAGGAATCATATCA
AATTTCCAGGATTGTGATCAGAGCATGCTTCCAAATTTTTCTATTTTGAAAGAGAAACTC
AGTAATCCTGATATTCAAGAGGCTGACAGATCACAGCACTTCTATAAACAATTGCTCGAA
GCTGCAGAGGCATGCGAGGGGTTGAGCGGAAGATCATTAAGAAAACTTCCATTCTTGGCA
CATGCAGCTCTTGCTAACCCTAACGGTTGCGATCCTAGCAAGTTCTTGCTTACTGTGATA
GATACAGCTAGAAAAGAGCGTTCTGAGCTACCTGACTGAATTTAAGGTTATTTCTGTAAA
AAAATGTTTTAATGCTTAATGTAAAAAATATAGGAAATG