Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g05720.2
CDS Infomation

gene=Cs5g05720
Sequence

ATGATTTTGAACAGAGAAGAGGCTTCTGCTTCTCTAGAGTGGAAGTGCTCTCAGGCCTTC
GGCGAAAGAAATCCCGATGAGGAACTTCAAGACGTTGATATTGTATCAGCAATTGAATTC
GACAAGACCGGCGATTACCTTGCCGTCGGAGATCGCGGTGGCCGTGTTATTCTTTTCGAA
ACAGTTGGTGGCAAAAATACACCAAACCAGCACATTTCGAGAAGTGAGTTGGAGAAACAA
ATGGATTTTACCTCCACAAGCCATCCTGAATATCGATACAAAACTGAATTTCAGAGTCAT
GAGCCCGAGTTTGATTACTTGAAGAGCTTGGAAATTGAAGAGAAGATCAACAGAGTGAGA
TGGTGTGCTGCACCAAATGGATCAATGTTTATCCTTTCTACAAATGATAAGACAATTAAA
CTGTGGAAGGTTAGGGATCAAAAGGTGAAGAAAATTAAGGAAATGGATCACTTTCCATTT
GTATCTTCAGAAAACACCCTTTTAGCTGAGAAGAACTTCATGAATGAGCATAATCCACCA
TCTTTTGCTCATGGCTACCATCTGGAATGGACAGAGAACATGGCTACCAAGGTGTATCCT
CATGCACATGATTTCAATATCAACTCAATATCAAATAATAGTGACTGTGAGACCTTTGTA
TCTGCGGATGACCTCAGAATAAACTTGTGGAACCTTGAGATCAGTGACCAATGTTTCAAT
ATTGTTGACATGAAGCCATCAAACATGGATGATCTTACTGAGGTCATAACTTCAGCTGAA
TTCCACCCTATTTATTGTAATCTGCTTGCATACAGCAGCTCAAGAGGTTTTGTTCGACTG
GTTGACATGCGACAGTCTGCATTATGTGATCACAGTGCAAGAATATTACGAGATGCAGCA
GAATCCCATGGGTCAAAATCCTTTTTCACAGAGATTATTGCATCCATTTCTGATATAAAG
TTTGCAAATGATGGGCAGCACCTCTTAAGTCGTGATTATATGAATCTAAAGTTGTGGGAT
ATACGTATGGATTCTACGCCAGTTGCAACATTCAAGATTCATGAGCATCTACGCCCTAAG
CTGTGTGATTTATATAATAACGACTCTATATTTGATAAATTTGAGTGCTCTGTCAGCGGG
GATGGACTCCATTTTGCAACCGGATCCTATAGCAATCTTTTACGTATCTTCTCCCATGGT
GTTGGAAGTGCAGGAGGGATAACGGTTGAAGCTGGCAAAAATGAAAACAGGAAGCCAATT
CTTCAAGCTGCTCCCAGGGCCAGAAGATCTTCTTTAAGTAACCTGACACGTGGGCTTTAT
CGACAAGCGCATGAAAATTCAAGCTCAGGTCATCATGAACTTTCCTATAACTTGAGCTCC
AAGCTGCTGCATTTAGCATGGCATCCTACAACAAATTTGATTGCTTGTGCTAATGGAAAT
AGTTTGTTCTTCCATTATGCATAG

Peptide Sequence

PEP ID

Cs5g05720.2
PEP Infomation
Sequence

MILNREEASASLEWKCSQAFGERNPDEELQDVDIVSAIEFDKTGDYLAVGDRGGRVILFE
TVGGKNTPNQHISRSELEKQMDFTSTSHPEYRYKTEFQSHEPEFDYLKSLEIEEKINRVR
WCAAPNGSMFILSTNDKTIKLWKVRDQKVKKIKEMDHFPFVSSENTLLAEKNFMNEHNPP
SFAHGYHLEWTENMATKVYPHAHDFNINSISNNSDCETFVSADDLRINLWNLEISDQCFN
IVDMKPSNMDDLTEVITSAEFHPIYCNLLAYSSSRGFVRLVDMRQSALCDHSARILRDAA
ESHGSKSFFTEIIASISDIKFANDGQHLLSRDYMNLKLWDIRMDSTPVATFKIHEHLRPK
LCDLYNNDSIFDKFECSVSGDGLHFATGSYSNLLRIFSHGVGSAGGITVEAGKNENRKPI
LQAAPRARRSSLSNLTRGLYRQAHENSSSGHHELSYNLSSKLLHLAWHPTTNLIACANGN
SLFFHYA*

Transcript Sequence

Transcript ID

Cs5g05720.2
Transcript Infomation

gene=Cs5g05720 CDS=170-1633
Sequence

CCGAGCTGTAAGCACAGCAGAAGCTTGAGGCATTCAAGCAAGAATCAGAATCCGAGTCAG
TGATGGAACAATTTCCATTTCCTCGTTCTGTTGTTGGTTTTGTCTTAGTCTGAAAATGTC
GAGCATGTGAAATCAACAAACGACGCCGTTTCTTCACAAAGCATCATATATGATTTTGAA
CAGAGAAGAGGCTTCTGCTTCTCTAGAGTGGAAGTGCTCTCAGGCCTTCGGCGAAAGAAA
TCCCGATGAGGAACTTCAAGACGTTGATATTGTATCAGCAATTGAATTCGACAAGACCGG
CGATTACCTTGCCGTCGGAGATCGCGGTGGCCGTGTTATTCTTTTCGAAACAGTTGGTGG
CAAAAATACACCAAACCAGCACATTTCGAGAAGTGAGTTGGAGAAACAAATGGATTTTAC
CTCCACAAGCCATCCTGAATATCGATACAAAACTGAATTTCAGAGTCATGAGCCCGAGTT
TGATTACTTGAAGAGCTTGGAAATTGAAGAGAAGATCAACAGAGTGAGATGGTGTGCTGC
ACCAAATGGATCAATGTTTATCCTTTCTACAAATGATAAGACAATTAAACTGTGGAAGGT
TAGGGATCAAAAGGTGAAGAAAATTAAGGAAATGGATCACTTTCCATTTGTATCTTCAGA
AAACACCCTTTTAGCTGAGAAGAACTTCATGAATGAGCATAATCCACCATCTTTTGCTCA
TGGCTACCATCTGGAATGGACAGAGAACATGGCTACCAAGGTGTATCCTCATGCACATGA
TTTCAATATCAACTCAATATCAAATAATAGTGACTGTGAGACCTTTGTATCTGCGGATGA
CCTCAGAATAAACTTGTGGAACCTTGAGATCAGTGACCAATGTTTCAATATTGTTGACAT
GAAGCCATCAAACATGGATGATCTTACTGAGGTCATAACTTCAGCTGAATTCCACCCTAT
TTATTGTAATCTGCTTGCATACAGCAGCTCAAGAGGTTTTGTTCGACTGGTTGACATGCG
ACAGTCTGCATTATGTGATCACAGTGCAAGAATATTACGAGATGCAGCAGAATCCCATGG
GTCAAAATCCTTTTTCACAGAGATTATTGCATCCATTTCTGATATAAAGTTTGCAAATGA
TGGGCAGCACCTCTTAAGTCGTGATTATATGAATCTAAAGTTGTGGGATATACGTATGGA
TTCTACGCCAGTTGCAACATTCAAGATTCATGAGCATCTACGCCCTAAGCTGTGTGATTT
ATATAATAACGACTCTATATTTGATAAATTTGAGTGCTCTGTCAGCGGGGATGGACTCCA
TTTTGCAACCGGATCCTATAGCAATCTTTTACGTATCTTCTCCCATGGTGTTGGAAGTGC
AGGAGGGATAACGGTTGAAGCTGGCAAAAATGAAAACAGGAAGCCAATTCTTCAAGCTGC
TCCCAGGGCCAGAAGATCTTCTTTAAGTAACCTGACACGTGGGCTTTATCGACAAGCGCA
TGAAAATTCAAGCTCAGGTCATCATGAACTTTCCTATAACTTGAGCTCCAAGCTGCTGCA
TTTAGCATGGCATCCTACAACAAATTTGATTGCTTGTGCTAATGGAAATAGTTTGTTCTT
CCATTATGCATAGTTGTCTGTATATTCGCACTTATGCAGACTTGAAAGAGCGTAGTTCAG
AACTCAGGCCCTATTTTGTCAGGAGTCAAATTGAACAGAAAAATACATGCACTCTCTCTC
TCGCTCTCTCTCAATATTGCCTAATCATCTTGTAGAAAATGACGACAATTAAAGAGCAAA
CCAAAAATAAGTCTGATTATAATAAAGAAAAACATTTTTTTTTT