Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g05440.1
CDS Infomation

gene=Cs5g05440
Sequence

ATGGCATTGAATTTGCAGATCCCAGCTGAAATCAAGGCTCTCTCTTTCTTGGAGACAACC
AGGTCAAATCATCGCCTCCCCAAGCTCTCAGGTGGGTTTCCTTTGAAGAGGAAGGATAAT
GCAACGGCGACGTTTGGTAGAATAGTTCAATGTTCTGCTCAGGGACCTCCTCCTGCATGG
CCAGGCCGAGCTGTTACAGAGACTTTTCGTAAGACTTGGGATGGTCCAAAGCCAATCTCA
GTGCTTGGGTCAACTGGTTCTATTGGAACTCAGACGTTGGACATAGTTGCGGAGCATGAA
GATAAATTCAGAGTTGTGGCACTGGCAGCTGGTTCAAATATAACTCTTCTTGCTGATCAG
GTGAAGAGATTCAAACCTCAAGTAGTTGCTGTTAGAAATGAGTCATTACTTGATGAAATC
AAGGAGGCTTTGGCTAATGTTGAAGAAAAGCCCGAGATTTTGGCCGGGGAACAGGGAGTC
ATTGAGGCTGCCCGACACCCCGATGCTGTCACCGTAGTGACAGGTATAGTCGGTTGTGCA
GGATTAAAGCCTACAGTTGCTGCGATAGAAGCAGGAAAAGATATAGCTTTGGCCAATAAG
GAGACATTGATTGCTGGTGGTCCTTTTGTCCTTCCTCTAGCTCACAAGCATAACATAAAA
ATTCTTCCAGCTGATTCAGAACATTCTGCCATATTTCAGTGTATTCAAGGCTTGCCTGAG
GGTGCACTTCGGCGCATTATTTTAACTGCATCTGGTGGGGCTTTCAGGGACTGGCCGGTT
GAGAAACTGAAAGAAGTTAAAGTGGCTGATGCATTGAAGCATCCTAACTGGAGTATGGGA
AAAAAGATTACTGTCGATTCTGCTACCCTTTTCAACAAGGGTTTAGAAGTAATTGAAGCC
CATTACCTATTTGGAGCCGAATATGATAATATTGAGATAATAATTCATCCACAGTCTATC
ATACACTCAATGGTCGAAACACAGGATTCTTCTGTTATTGGACAGTTGGGTTGGCCTGAT
ATGCGCTTACCAATCATTTATACAATGTCTTGGCCAGAAAGAATTTACTGCTCCGAATTG
ACGTGGCCTCGCCTTGATCTTTCCAAGCTTGGATCATTAACATTTGTGGCTCCTGACACT
GCAAAATATCCATCTGTAAATCTTGCCTATGCTGCTGGACGGGCTGGAGGCACCATGACA
GGAGTTCTTAGTGCAGCTAACGAGAAAGCAGTAGAGATGTTCATTGATGAAAAGATTGGC
TATCTGGATATTTTCAAGGTTGTGGAGCTAACGTGTGATAAGCACAAGGCGGACTTGGTA
ACCTCGCCTTCCCTAGAGGATATAATACATTATGATGCATGGGCACGAGAGTATGCAGCT
GGTTTGCAATTTTCATCTGGTAGAAGCCCTGTTCCAGCATGA

Peptide Sequence

PEP ID

Cs5g05440.1
PEP Infomation
Sequence

MALNLQIPAEIKALSFLETTRSNHRLPKLSGGFPLKRKDNATATFGRIVQCSAQGPPPAW
PGRAVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQ
VKRFKPQVVAVRNESLLDEIKEALANVEEKPEILAGEQGVIEAARHPDAVTVVTGIVGCA
GLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHKHNIKILPADSEHSAIFQCIQGLPE
GALRRIILTASGGAFRDWPVEKLKEVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEA
HYLFGAEYDNIEIIIHPQSIIHSMVETQDSSVIGQLGWPDMRLPIIYTMSWPERIYCSEL
TWPRLDLSKLGSLTFVAPDTAKYPSVNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKIG
YLDIFKVVELTCDKHKADLVTSPSLEDIIHYDAWAREYAAGLQFSSGRSPVPA*

Transcript Sequence

Transcript ID

Cs5g05440.1
Transcript Infomation

gene=Cs5g05440 CDS=313-1734
Sequence

CGTGTTGCCACGTGCATTCTCATCACACACTTTTCATTTTCCAAATTTGTTTATTACCAA
TTAGGCTGTTATGGACGGCACCTAAGAATTTGCAGTAAAAATGGATAAATAATAAAACGG
GAAGCCATAAATAACAATGCTGTTGATGATGATGAATTTTGGTCAACTTCGTACACCACC
ACGAAATACATTTTAAAGTCACTTTCTCCTCTTCTTCTTTCATTATTTCTTCATTGCTGC
TCCGAACTGAAACTTGTGTTGAGAGAGAGAGATAAAAAGAGGAGAAAAAAAAAAAAGGTT
GTTAAAGCTTTGATGGCATTGAATTTGCAGATCCCAGCTGAAATCAAGGCTCTCTCTTTC
TTGGAGACAACCAGGTCAAATCATCGCCTCCCCAAGCTCTCAGGTGGGTTTCCTTTGAAG
AGGAAGGATAATGCAACGGCGACGTTTGGTAGAATAGTTCAATGTTCTGCTCAGGGACCT
CCTCCTGCATGGCCAGGCCGAGCTGTTACAGAGACTTTTCGTAAGACTTGGGATGGTCCA
AAGCCAATCTCAGTGCTTGGGTCAACTGGTTCTATTGGAACTCAGACGTTGGACATAGTT
GCGGAGCATGAAGATAAATTCAGAGTTGTGGCACTGGCAGCTGGTTCAAATATAACTCTT
CTTGCTGATCAGGTGAAGAGATTCAAACCTCAAGTAGTTGCTGTTAGAAATGAGTCATTA
CTTGATGAAATCAAGGAGGCTTTGGCTAATGTTGAAGAAAAGCCCGAGATTTTGGCCGGG
GAACAGGGAGTCATTGAGGCTGCCCGACACCCCGATGCTGTCACCGTAGTGACAGGTATA
GTCGGTTGTGCAGGATTAAAGCCTACAGTTGCTGCGATAGAAGCAGGAAAAGATATAGCT
TTGGCCAATAAGGAGACATTGATTGCTGGTGGTCCTTTTGTCCTTCCTCTAGCTCACAAG
CATAACATAAAAATTCTTCCAGCTGATTCAGAACATTCTGCCATATTTCAGTGTATTCAA
GGCTTGCCTGAGGGTGCACTTCGGCGCATTATTTTAACTGCATCTGGTGGGGCTTTCAGG
GACTGGCCGGTTGAGAAACTGAAAGAAGTTAAAGTGGCTGATGCATTGAAGCATCCTAAC
TGGAGTATGGGAAAAAAGATTACTGTCGATTCTGCTACCCTTTTCAACAAGGGTTTAGAA
GTAATTGAAGCCCATTACCTATTTGGAGCCGAATATGATAATATTGAGATAATAATTCAT
CCACAGTCTATCATACACTCAATGGTCGAAACACAGGATTCTTCTGTTATTGGACAGTTG
GGTTGGCCTGATATGCGCTTACCAATCATTTATACAATGTCTTGGCCAGAAAGAATTTAC
TGCTCCGAATTGACGTGGCCTCGCCTTGATCTTTCCAAGCTTGGATCATTAACATTTGTG
GCTCCTGACACTGCAAAATATCCATCTGTAAATCTTGCCTATGCTGCTGGACGGGCTGGA
GGCACCATGACAGGAGTTCTTAGTGCAGCTAACGAGAAAGCAGTAGAGATGTTCATTGAT
GAAAAGATTGGCTATCTGGATATTTTCAAGGTTGTGGAGCTAACGTGTGATAAGCACAAG
GCGGACTTGGTAACCTCGCCTTCCCTAGAGGATATAATACATTATGATGCATGGGCACGA
GAGTATGCAGCTGGTTTGCAATTTTCATCTGGTAGAAGCCCTGTTCCAGCATGACTGCTT
GCATTGATGCCCTACTTTGAGAACTAGAGAGATGTGTTTACTTTTTGCCAAAAACTGGTA
TTCTCGTCAATGTTTAAAGAGGCATCGAGCAATTGTACCATAAATAAATATAAGGTGGGG
ATTCAGTATGTGTCCCCGATTTTATAGGTGCAAATGTATGAATGCATTTTTTAACCAATT
TGACTGTTGGTGTTCTCTTAGTATAGAGGAAAAAGGGATATTTTTTAAAAAATCACAAAT
AAATGGAAGATAAGAAAAAATTGTTTTTTTTGTAGTGCAAAGAAATATCGCTGGTTTAGA
GCTAAAGGCCTATATATTAACAATGTTTAGGCTGGGCTTGCTTTACACGTCTATATCGGC
TGAGGTTTGATAA