Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g04380.1
CDS Infomation

gene=Cs5g04380
Sequence

ATGGGAAACTGTTTCGCTTGTGTAAGACCATCACCGGAGACAAAATCAAAAGCGAAAACA
AAAACCGACTCCAAAACCCGTCGCAAGAAACGAGCCACCAAAGACCGGAAATCGAACCCT
TACTCAACCAGCCCCATCACCAACCCGATCCACTCACCCGCCCCGATCCGAGTCCTCAAG
GACATCGTCCCCTTAAGCCACCGCACCCGCATAACCGACAAGTACATACTGGGCCGCGAG
CTCGGCCGCGGCGAGTTCGGCATCACCTACCTCTGCACGGACCGCGAGACCAAAGAGGAC
CTCGCTTGCAAGTCCATTTCCAAGCGGAAGCTCCGCACCGCTATCGACGTCGAGGACGTT
AGGCGCGAAGTGATGATAATGTCAACGTTGCCCCACCATCCGAATGTCATTAAGCTCAGA
GCCACTTATGAAGATGCTGAGAATGTTCATTTGGTCATGGAGTTGTGTGAGGGCGGTGAG
CTTTTTGATAGGATTGTGGCGCGAGGGCATTACAGTGAGAGAGCGGCCGCTGGGGTGGCC
AGGATCATCATGGAGGTCGTGAGAATGTGTCATGAGAATGGTGTTATGCATAGAGATTTG
AAGCCTGAGAATTTTTTGTTTGCTAATAAGAAGGAGAATAGTCCGCTTAAGGCTATTGAT
TTTGGACTTTCTGTGTTTTTTAAGTCTGGAGAGAAGTTCTCAGAGATTGTGGGCAGTCCA
TACTACATGGCACCAGAGGTGTTGAAGAGGAATTATGGGCCGGAAGTTGATGTATGGAGT
GCGGGAGTCATTCTTTATATCTTGTTATGCGGGGTTCCTCCATTTTGGGCTGAGACTGAA
CAGGGTGTTGCTTTGGCGATTTTGAGGGGGTTGATTGATTTCAAGAGGGAACCATGGCCT
CAGATTTCAGAGAGCGCTAAGAGTCTAGTCCGGCAGATGTTGGAGTCAGACCCCAAAAAG
CGGTTGACTGCTCAACAGGTTCTTGAACATCCGTGGTTACAAAATGCAAAGAAAGCTTCA
AATGTTCCTTTGGGAGATATTGTGAGGGCACGATTGAGGCAATTTTCTGTGATGAATAGA
TTTAAGAAGAGAGCCCTGCGGGTAATTGCAGAGCACTTATCTGTTGAAGAGGTTGAAGTA
ATTAGGGATATGTTCAAATTGATGGACACAGATAGTGATGGAAAAGTCTCATATGAGGAA
CTGAAGGCAGGGCTTCGGAAAGTTGGTTCACAGTTGGCTGAACCAGAGATGAAGATGTTA
ATGGAAGTGGCTGATGTTGATGGGAATGGAGTGCTGGACTACGGAGAGTTTGTTGCAGTA
ACAATTCATTTGCAGAAGATGGAGAATGATGAGCATTTCCGTAGAGCATTTATGTTTTTT
GACAAAGATGGGAGTGGATATATTGAGTCAGATGAGCTGCGGGAGGCCTTAGCTGATGAA
TCTGGTGAAACTGAGAATGATGTATTGAATGACATTATGCGTGAAGTCGACACGGACAAG
GATGGGCGTATCAGTTACGAGGAGTTTGTTGCTATGATGAAAACTGGAACTGACTGGAGA
AAGGCATCTCGACAGTATTCAAGGGAGAGATTCAAGAGTTTAAGCCTTAACCTAATGAAA
GACGGCTCACTTCAGCTTCACGATGCAGCTACTGGCCAAGCTATTGCTGTCTGA

Peptide Sequence

PEP ID

Cs5g04380.1
PEP Infomation
Sequence

MGNCFACVRPSPETKSKAKTKTDSKTRRKKRATKDRKSNPYSTSPITNPIHSPAPIRVLK
DIVPLSHRTRITDKYILGRELGRGEFGITYLCTDRETKEDLACKSISKRKLRTAIDVEDV
RREVMIMSTLPHHPNVIKLRATYEDAENVHLVMELCEGGELFDRIVARGHYSERAAAGVA
RIIMEVVRMCHENGVMHRDLKPENFLFANKKENSPLKAIDFGLSVFFKSGEKFSEIVGSP
YYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGLIDFKREPWP
QISESAKSLVRQMLESDPKKRLTAQQVLEHPWLQNAKKASNVPLGDIVRARLRQFSVMNR
FKKRALRVIAEHLSVEEVEVIRDMFKLMDTDSDGKVSYEELKAGLRKVGSQLAEPEMKML
MEVADVDGNGVLDYGEFVAVTIHLQKMENDEHFRRAFMFFDKDGSGYIESDELREALADE
SGETENDVLNDIMREVDTDKDGRISYEEFVAMMKTGTDWRKASRQYSRERFKSLSLNLMK
DGSLQLHDAATGQAIAV*

Transcript Sequence

Transcript ID

Cs5g04380.1
Transcript Infomation

gene=Cs5g04380 CDS=391-2064
Sequence

TTTTTTTTGTAAAAAAAAGGGAAGAAGAAGAAGAAGAGGAAGAAGAAGAAAAGACTTTGA
AAAAGAAAGATTAAGTATGGGGAAATTTCAAAATCCACATATTCCTCAAACAGACCCGCG
TTTTCTCTCCCAGTCTTCAATCTCCACCCGCCATCACATCCCTATTTGCCCCATTCCCAG
TCCTCCACCACCGCCACCCTCGCCAGTCAACTCAACCACCACTTAAACGCACCGTTTCAG
TGCCTCCCCTTCTCCCAGGAGAAAAAAAAAACAAAACCACTCATAACCCCCCCTCTCTCT
CTCTCTCTCCCTCTCTCTTTCTCTCTCACACAGATACACGCACAGTCACACGCCAAAAAA
AAAAAGAGGTGACAACAAGAAACACAGAGCATGGGAAACTGTTTCGCTTGTGTAAGACCA
TCACCGGAGACAAAATCAAAAGCGAAAACAAAAACCGACTCCAAAACCCGTCGCAAGAAA
CGAGCCACCAAAGACCGGAAATCGAACCCTTACTCAACCAGCCCCATCACCAACCCGATC
CACTCACCCGCCCCGATCCGAGTCCTCAAGGACATCGTCCCCTTAAGCCACCGCACCCGC
ATAACCGACAAGTACATACTGGGCCGCGAGCTCGGCCGCGGCGAGTTCGGCATCACCTAC
CTCTGCACGGACCGCGAGACCAAAGAGGACCTCGCTTGCAAGTCCATTTCCAAGCGGAAG
CTCCGCACCGCTATCGACGTCGAGGACGTTAGGCGCGAAGTGATGATAATGTCAACGTTG
CCCCACCATCCGAATGTCATTAAGCTCAGAGCCACTTATGAAGATGCTGAGAATGTTCAT
TTGGTCATGGAGTTGTGTGAGGGCGGTGAGCTTTTTGATAGGATTGTGGCGCGAGGGCAT
TACAGTGAGAGAGCGGCCGCTGGGGTGGCCAGGATCATCATGGAGGTCGTGAGAATGTGT
CATGAGAATGGTGTTATGCATAGAGATTTGAAGCCTGAGAATTTTTTGTTTGCTAATAAG
AAGGAGAATAGTCCGCTTAAGGCTATTGATTTTGGACTTTCTGTGTTTTTTAAGTCTGGA
GAGAAGTTCTCAGAGATTGTGGGCAGTCCATACTACATGGCACCAGAGGTGTTGAAGAGG
AATTATGGGCCGGAAGTTGATGTATGGAGTGCGGGAGTCATTCTTTATATCTTGTTATGC
GGGGTTCCTCCATTTTGGGCTGAGACTGAACAGGGTGTTGCTTTGGCGATTTTGAGGGGG
TTGATTGATTTCAAGAGGGAACCATGGCCTCAGATTTCAGAGAGCGCTAAGAGTCTAGTC
CGGCAGATGTTGGAGTCAGACCCCAAAAAGCGGTTGACTGCTCAACAGGTTCTTGAACAT
CCGTGGTTACAAAATGCAAAGAAAGCTTCAAATGTTCCTTTGGGAGATATTGTGAGGGCA
CGATTGAGGCAATTTTCTGTGATGAATAGATTTAAGAAGAGAGCCCTGCGGGTAATTGCA
GAGCACTTATCTGTTGAAGAGGTTGAAGTAATTAGGGATATGTTCAAATTGATGGACACA
GATAGTGATGGAAAAGTCTCATATGAGGAACTGAAGGCAGGGCTTCGGAAAGTTGGTTCA
CAGTTGGCTGAACCAGAGATGAAGATGTTAATGGAAGTGGCTGATGTTGATGGGAATGGA
GTGCTGGACTACGGAGAGTTTGTTGCAGTAACAATTCATTTGCAGAAGATGGAGAATGAT
GAGCATTTCCGTAGAGCATTTATGTTTTTTGACAAAGATGGGAGTGGATATATTGAGTCA
GATGAGCTGCGGGAGGCCTTAGCTGATGAATCTGGTGAAACTGAGAATGATGTATTGAAT
GACATTATGCGTGAAGTCGACACGGACAAGGATGGGCGTATCAGTTACGAGGAGTTTGTT
GCTATGATGAAAACTGGAACTGACTGGAGAAAGGCATCTCGACAGTATTCAAGGGAGAGA
TTCAAGAGTTTAAGCCTTAACCTAATGAAAGACGGCTCACTTCAGCTTCACGATGCAGCT
ACTGGCCAAGCTATTGCTGTCTGATGTAGAGGATAGTCTATAAAATTATTTTGCTTGTTA
CGAGTCTGGCTGTTTGTTTTCATTTCGTACCGATACATTCCATTCGGGGAAAAAGTATGG
CATCCAGAAAATTTGAGTTTTACATTCAAGAATGAGTTGTGATGAGGCATTTGGGGAGAT
TCTTTGGTATTCGTCGGACTTTTGCTTGGGTTTCAGCTTGGCATGAATCATGCATAAGAT
GAAGGTATCGCACATCGGCTATAATTCTCATTTGT