Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs5g01550.2
CDS Infomation

gene=Cs5g01550
Sequence

ATGTCTGCAGCTGTGGAGGAACCTCAGTTTCAAAACGGCGTCGCATCAACTGACGAGCCA
AAACCCGAACCAGCTGCAGATCCAAAGGTAGAGGAGACTAAAGAGACCTTGATCCAGCCT
CCCCCGTCGACCGAACAAACGGAAAAGCAGCATCCTTCGACCGAACAAACAGAAAAGCAG
CCTCCGTCGACCGAACAAACGCTAAACCCAGCGCTGCGTAAAGATGAAGGCAACCGAACA
TTCACGATGAGAGAGTTGCTCACTGAATTAAAAAGCGAAGGTGAAGATAGCGTCACTGAC
GCCAGTTTCAGTCAAGGAAATACGCCGCATCAGCTGGCAGAGCAGAACAATGCTGCAATG
GAATTGATTAACAGTGTCACTGGTGTTGATGAGGAGGGTCGATCTCGCCAGCGGATTCTC
ACATTTGCTGCCAAGAGGTATGCTAATGCAATAGAGAGAAACCCAGAAGATTATGACGCA
CTATACAATTGGGCACTGGTTCTTCAGGAAAGTGCAGATAATGTTAGTTTAGATTCTACT
TCACCTTCTAAAGATGCTTTGCTTGAGGAGGCTTGTAAAAAGTATGATGAAGCTACGCGC
CTGTGTCCTACACTACATGATGCTTTCTATAATTGGGCCATAGCGATCTCTGATCGAGCC
AAAATGCGTGGTCGTACGAAGGAGGCTGAAGAATTGTGGAAGCAGGCAACAAAGAACTAT
GAGAAAGCTGTCCAACTTAACTGGAACAGTCCCCAGGCTCTTAACAATTGGGGACTCGCT
TTACAGGAACTCAGTGCAATTGTTCCTGCACGAGAAAAGCAAACAATTGTGAGAACTGCA
ATTAGTAAGTTCCGTGCAGCAATACAGCTGCAGTTCGACTTTCATCGAGCAATTTACAAC
CTTGGAACAGTCTTGTATGGTTTAGCAGAGGACACGCTAAGAACTGGAGGAACAGTGAAT
CCTAGAGAAGTTTCACCTAATGAGTTGTACAGCCAATCTGCAATCTACATTGCAGCTGCT
CATGCATTAAAACCGAGTTACTCAGTTTACAGCAGTGCATTGCGTCTTGTGCGTTCCATG
TTACCTTTACCATATCTTAAAGCTGGATATTTGACGGCACCACCTGCTGGGATCCCGGTT
GCACCTCATAGTGATTGGAAAAGATCACAGTTTGTTTTGAATCACGAAGGACTTCAACAG
GCCAGCAAAAATGAGCAAAAACAAGTAACCCGGAGCCTGTCGGGCAGAACAGGAGATTTT
AGTCCTGACAGAAGGGCTATCAGAATTGAAGTTCCGGATATTGTGTCTGTATCAGCATGT
GCTGATTTGACGTTGCCACCTGGAGCTGGCCTCTGCATCGAGACAATTCACGGACCAGTT
TTCTTGGTTGCTGACTCATGGGAAGCCCTAGATGGATGGCTTGATGCAATCCGTCTGGTT
TACACAATCTATGCACGGGGCAAAGCTGATGTTCTGGCGGGTATCATAACCGGTTGA

Peptide Sequence

PEP ID

Cs5g01550.2
PEP Infomation
Sequence

MSAAVEEPQFQNGVASTDEPKPEPAADPKVEETKETLIQPPPSTEQTEKQHPSTEQTEKQ
PPSTEQTLNPALRKDEGNRTFTMRELLTELKSEGEDSVTDASFSQGNTPHQLAEQNNAAM
ELINSVTGVDEEGRSRQRILTFAAKRYANAIERNPEDYDALYNWALVLQESADNVSLDST
SPSKDALLEEACKKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEELWKQATKNY
EKAVQLNWNSPQALNNWGLALQELSAIVPAREKQTIVRTAISKFRAAIQLQFDFHRAIYN
LGTVLYGLAEDTLRTGGTVNPREVSPNELYSQSAIYIAAAHALKPSYSVYSSALRLVRSM
LPLPYLKAGYLTAPPAGIPVAPHSDWKRSQFVLNHEGLQQASKNEQKQVTRSLSGRTGDF
SPDRRAIRIEVPDIVSVSACADLTLPPGAGLCIETIHGPVFLVADSWEALDGWLDAIRLV
YTIYARGKADVLAGIITG*

Transcript Sequence

Transcript ID

Cs5g01550.2
Transcript Infomation

gene=Cs5g01550 CDS=244-1740
Sequence

CCTCAGTCTAATTTGTACTGATGAGGCAGGCGCAGGCGCGCAGGATTTACAATTTTACGC
TCCGCTGATGACGTGTATGGCATACGATTTCCACGTGTGCAGCGAGGGAGTGAAAGTAAT
TTCGACAACGGAACGTCCCATTCCTTCATCTCCAAATTTTCATCGGAATTGCTGGTATTT
TCTCCGAGCAGCTCTCTTCCATTCTTTCAATTTCCATCTGCACTCAACTTCCGATCTTTC
CCAATGTCTGCAGCTGTGGAGGAACCTCAGTTTCAAAACGGCGTCGCATCAACTGACGAG
CCAAAACCCGAACCAGCTGCAGATCCAAAGGTAGAGGAGACTAAAGAGACCTTGATCCAG
CCTCCCCCGTCGACCGAACAAACGGAAAAGCAGCATCCTTCGACCGAACAAACAGAAAAG
CAGCCTCCGTCGACCGAACAAACGCTAAACCCAGCGCTGCGTAAAGATGAAGGCAACCGA
ACATTCACGATGAGAGAGTTGCTCACTGAATTAAAAAGCGAAGGTGAAGATAGCGTCACT
GACGCCAGTTTCAGTCAAGGAAATACGCCGCATCAGCTGGCAGAGCAGAACAATGCTGCA
ATGGAATTGATTAACAGTGTCACTGGTGTTGATGAGGAGGGTCGATCTCGCCAGCGGATT
CTCACATTTGCTGCCAAGAGGTATGCTAATGCAATAGAGAGAAACCCAGAAGATTATGAC
GCACTATACAATTGGGCACTGGTTCTTCAGGAAAGTGCAGATAATGTTAGTTTAGATTCT
ACTTCACCTTCTAAAGATGCTTTGCTTGAGGAGGCTTGTAAAAAGTATGATGAAGCTACG
CGCCTGTGTCCTACACTACATGATGCTTTCTATAATTGGGCCATAGCGATCTCTGATCGA
GCCAAAATGCGTGGTCGTACGAAGGAGGCTGAAGAATTGTGGAAGCAGGCAACAAAGAAC
TATGAGAAAGCTGTCCAACTTAACTGGAACAGTCCCCAGGCTCTTAACAATTGGGGACTC
GCTTTACAGGAACTCAGTGCAATTGTTCCTGCACGAGAAAAGCAAACAATTGTGAGAACT
GCAATTAGTAAGTTCCGTGCAGCAATACAGCTGCAGTTCGACTTTCATCGAGCAATTTAC
AACCTTGGAACAGTCTTGTATGGTTTAGCAGAGGACACGCTAAGAACTGGAGGAACAGTG
AATCCTAGAGAAGTTTCACCTAATGAGTTGTACAGCCAATCTGCAATCTACATTGCAGCT
GCTCATGCATTAAAACCGAGTTACTCAGTTTACAGCAGTGCATTGCGTCTTGTGCGTTCC
ATGTTACCTTTACCATATCTTAAAGCTGGATATTTGACGGCACCACCTGCTGGGATCCCG
GTTGCACCTCATAGTGATTGGAAAAGATCACAGTTTGTTTTGAATCACGAAGGACTTCAA
CAGGCCAGCAAAAATGAGCAAAAACAAGTAACCCGGAGCCTGTCGGGCAGAACAGGAGAT
TTTAGTCCTGACAGAAGGGCTATCAGAATTGAAGTTCCGGATATTGTGTCTGTATCAGCA
TGTGCTGATTTGACGTTGCCACCTGGAGCTGGCCTCTGCATCGAGACAATTCACGGACCA
GTTTTCTTGGTTGCTGACTCATGGGAAGCCCTAGATGGATGGCTTGATGCAATCCGTCTG
GTTTACACAATCTATGCACGGGGCAAAGCTGATGTTCTGGCGGGTATCATAACCGGTTGA
TTTTATCTCTATTACTAATTTTATCGCCATGGAGACCTTTTCTCGAGGTAACTGATGATT
TGTTTATTGAGATTCCGCGGTTCAAGTAAAACTTGGTGTATATTATAAAGTATTTAATTC
AATTTTGCACTTACGCTTATTCTGCCCCTGCCAAAGGAACGTGAATCGGGTTGCTATATG
GATTTGTTATTTCATTTTGTTCCCCGTGCCTTGTTCAGGTTACAGTGATAAAAACCCAAC
TGTTCAGCTTGAAGCCGATGATTATATGTATTATGTAGATTACTCTAGGTTTAACCAAAA
TTTCGAAATTCAAATTTCGGGTATGTTATCATACATAAATTTATTGCACAAATGACTGGA
CATCGCACTAGCCAATGAAGTTGTTGCTGAGCGTTGGGAAGTTTAAAAAGATTGTTGCAA
GTAGGAGGAGAGTTTCTGAAAATGGAACCAAAAAAAAATAATTCTAAGAGGTAATTATAT
TATAAATTTAGTTGTTTGAAGTAATTTGCAATGTGTGCGCTTGTCGGGGATGGGGGGAAA
TGAACTAGATTACATCCGGATAGAATGGGGAGTCATTGTTGATAGCTAAAATTCAAACTC
CTATAAAAGAAAAGTGGGAATCATTATTTCGTATGGTAAATCATAAGCGATGTATAATTT
TAAAAGAGGTTCCTCTCTACTTCTACGAATCCAAAAATTTCATGCAGATAGGAGGTTGTA
TTTTGGCCAAGGCAAGAATTGAAGCAGGAAGTGTCCATAGCCCTTCCCCACAAATTAACC
CAGAGGCAACTGCAGGAATCATCAACTCGGCCTTCTTGGGGTTCCGTTTGTGCCACAGAT
AGACAACCAAACTCCCAACACACATATCAATAGCAAAGTATGCTCCAACTAGAAACGGCA
GAGCCATCACCATCGGCAGCGGCATCCATTTCCCAATCTTTTCCGGTGAAAAATCTCTTA
CAAGGTTAACCGCCACTGCTGAAGCAAATAAACCATAACAAAGCTGTAAGCAGTGCTGGG
GAAGAGCTGAGAAGCCTTGAACGCCTATAACCGCCATGTTTCTGTAGATTAATGCATAAG
GAGCCTTAAACTCTCCATGAGGGTTTCCCACATCAAATGCCTTGTAGAATAGAAGGAAAC
TGATAGGAGCCACCACGCAGCCAATGGCGGTGCCAATTACTTGGTTCAGGAACATTGCTC
GCGGAGAGGTATAAGTACAATGTGCCGTTTTGAAATCTTGCATAAGAATGCAAGCAACTG
AAACTACAGATTTGACGAGGCCACAGCCAACCATTCCAGCCACCAATCCATTTTCTCTCC
CGGACAATGCAGCTAGAACAAACAAGGCTACTTTCCCATAATTATAGGCCATGTTAATGT
CTGTTAACCCAGCTCCATAAGCATTGCAAAACGACAGAGATGGAGCAAGGATGTATGCTA
TCACAACATAGTACCATTTGAGTTGAGGGAACATGATCGGAATCACAATAATGGACAGGA
TGGAGAAGACTAGGTAACCAGCAACTCCAATCCACATGGGAATATTTTCTCTAAGGAAGA
TTTCATTGTGTTTTAGATCTTCGAGTGACTTCTTTTCGTCACCGTCAGCTGCAGGTAAGA
CAAGATGCATGCGTTATTATTACGCTGGTTAAAATACAAAAAGCAAACAAAGTATGGAAT
ATAAGTGACTTCTTCTCACGAGTGGACATCTGCATTTTGTATATCTAATCAGGCGTTCGC
CTGAGAACTTTTCGATACATACATACGTAGAGAATGATTTAAGGCTGCGCAATTGACCTG
CATTGAGGTTCTTGGTCTTTATCGTTCCATAAATGTTGATGACCGTGAGGCTCAATATCT
TCAGGAAATTATAGAGTCCGTCGCCTAAGATAAGAGCAACCGACAGGAAAACCTGCCAAG
AAAATTTTAAACAAGCTAAGAATTTAAAGATATTTGAAGAAGTAAAAATACCATTATGTA
GAAATTAAGAGAGAAACCTTGTAACCATACAAACTCTTCATATCACTTTCTTTCAAACTT
TCAGAGAACCAATGTCCTTTAAGCCGATCGATAAGTGGCCACATGATTCCATAAGAAAGA
ACAGCTCCAAGTAGCAAAGATAAGTTCACTAAATGGGAACAAATCATCCCTGCTCCAACG
TAAGTCATGCTAAAATCAAAATAGAATCTGCAAATTAAAAGCCAAAGAACCATTAGATTT
TTCCGGTTGCAATCTTTGCGTAAATGAATAAAGATTCCTACGTTTGCTTCCAAGCTTGCA
ATCCAAAAGTAGGGAACTGTTTGAATCCACAGCTCTGTTTGCCGCTGTAAAACCACTGAA
AGAATCCCCACAAGAAGCTGATTGAAAAGTATT