Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g20380.3
CDS Infomation

gene=Cs4g20380
Sequence

ATGTCTCAAACCAACTGGGAAGCTGATAAAATGTTAGATGTGTACATCCATGATTATTTA
GTGAAGAGAGATCTAAAGGCTTCTGCTCAAGCTTTTCAAGCTGAAGGAAAAGTATCGTCT
GATCCTGTAGCTATCGATGCACCTGGGGGTTTTCTGTTTGAGTGGTGGTCGGTTTTTTGG
GATATATTCATTGCTAGAACGAATGAGAAGCATTCGGAGGTTGCTGCATCCTACATCGAG
ACACAATTGATTAAGGCACGAGAGCAACAACAGCAACAACAGCAACAACAGCAACAACAG
CAGCAGCAGCAGCAGCAATCCCAACAGCCGCCACATCAGCAACAACAGCAGCAGCAGCAG
CAGCAACAGCAATTGCAAATGCAACAGATCCTATTGCAGAGGCATGCTCAACAGCAGCAG
CAGCACCAACAGCAACATCAACAGCAGCAGCAACAGCAACAACAGCCGCCACAACAGCCT
CAGCAGCAGCAGCCACAGCAACAGCAGCAGCGTAGGGATGGTGCCCACCTCCTAAATGGC
AATACAAATGGGCTATTGGGAAATGACTCTCTCATGCGACAGAACCCGGGAACTGCAAAT
GCCATGGCTACAAGGATGTACGAGGAAAAATTAAAACTGCCAGTGCTGAGGGATTCTTTG
GATGATGCGGCTATGAAACAAAGATTTGGTGAGAATATGGGCCAGCTCTTGGATCCAAAT
CATGCCTCCTATATAAAGTCAGCTGCAGCAACTGGCCAGCCCTCAGGGCAAGTATTGCAT
GGTACAGCTGGTGGGATGTCTCCGCAGGTTCAAGCCCGGAGTCAACAACTGCCTGGGTCC
ACACCAGATATAAAGAGTGAGATTAATCCAGTATTGAATCCCAGAGCAGCAGGGCCCGAA
GGATCATTAATGGGAATTCCTGGGTCAAATCAAGGTGGTAACAATTTAACTTTAAAAGGA
TGGCCACTCACAGGATTAGAACCGCTGAGGTCTGGGCTACTTCAGCAACAGAAGCCTTTC
ATACAGGCTCCTCAGCCGTTTCATCAAATTCAAATGCTGACACCGCAACACCAGCAACTT
CTTCTTGCACAGCAAAATTTGACATCACCTTCTGCTAGTGATGAAAGTAGAAGATTTAGA
ATGCTTTTGAATAATCGGAGTATGAGTCTTGGAAAGGATGGCCTCTCAAATTCTGTTGGT
GATGTGGTTTCCAATGTTGGCTCACCTTTACCTGCTGGTGGCCACCTTCTGCCTCGTGGA
GATACAGATATGCTAATCAAGTTGAAAATGGCTCAGATGCATCAACAACAGCAGCAACAA
CAACAGCAGCAGCAGCAGAACAGTAACCCACAGCAGCACACACTTTCAAACCAGCAATCA
CAGAGTTCAAATCACAATCTTCACCAACAGGATAAAATGGGCCCTGCTGGCAGCGTGACA
CTTGATGGTAGCATGTCAAACTCCTTTCGAGGAAATGACCAGGTTTCAAAAAACCAGACT
GGAAGAAAGAGAAAACAGCCGGTGTCCTCTTCAGGTCCTGCCAATAGCTCAGGGACTGCA
AATACTGCAGGACCGTCCCCAAGTTCAGCTCCCTCAACACCATCAACTCACACTCCTGGA
GATGTGATTTCGATGCCGGCTTTGCCTCATAGTGGTACTACTTCCAAGCCTTTGATGATG
TTTGGCACCGATGGAGCTGGCACTCTTACATCACCATCAAATCAGTTGTGGGATGATAAA
GATCTTGAATTGCGGGCTGATATGGATCGTTTGGTGGAGGATGGGTCCCTTGATGACAAT
GTCGAGTCTTTTCTATCACATGATGATACAGACCCCAGAGATGCTGGTGGTCGTGGTATG
GATGTCAGCCAAGGGTTCTCATTTAAGGAAGCAAATTCTGTTAGAGCAAGCACAAGCAAA
GTTATCTGCTGTCACTTTTCTTCAGATGGGAAGTTGCTTGCTACTGGTGGCCATGACAAA
AAGGCTGTACTGTGGCACACGGATACGTTAAAGTCGAAAACAAACCTTGAAGAGCATTCT
TCGTTGATTACTGATGTTCGTTTCAGTCCAAGCATGCCACGGCTTGCAACATCTTCATTT
GACAAGACTGTCAGAGTTTGGGACGCTGACAACCCTGGCTATTCACTTCGTACCTTTATG
GGACATTCTGCTTCTGTTATGTCTCTGGATTTCCACCCAAATAAAGATGATCTCATCTGC
TCTTGTGATGGGGATGGTGAAATACGCTATTGGAGTATTAACAATGGTAGCTGCACAAGA
GTTTTCAAGGGTGGTACGGCTCAGATGAGATTCCAGCCCCATCTTGGAAGGTATCTTGCC
GCAGCTGCAGAGAATGTTGTCTCTATACTGGATGCGGAGACTCAAGCCTGTCGTCTTTCA
TTGCAGGGACATACTAAACCAATCGATTCTGTGTGTTGGGATCCTTCTGGTGAGTTGCTA
GCATCTGTCAGTGAGGACTCTGTAAGAGTTTGGACAGTTGGATCTGGAAGTGAAGGGGAA
TGTGTTCATGAGTTGAGCTGTAATGGGAACAAGTTCCACTCCTGTGTTTTCCATCCTACA
TATCCGTCATTGCTGGTGATTGGCTGTTATCAGGCAAGTTACCTGTATCGTTGTTTGGTA
TTTATCAATATTTGA

Peptide Sequence

PEP ID

Cs4g20380.3
PEP Infomation
Sequence

MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFW
DIFIARTNEKHSEVAASYIETQLIKAREQQQQQQQQQQQQQQQQQQSQQPPHQQQQQQQQ
QQQQLQMQQILLQRHAQQQQQHQQQHQQQQQQQQQPPQQPQQQQPQQQQQRRDGAHLLNG
NTNGLLGNDSLMRQNPGTANAMATRMYEEKLKLPVLRDSLDDAAMKQRFGENMGQLLDPN
HASYIKSAAATGQPSGQVLHGTAGGMSPQVQARSQQLPGSTPDIKSEINPVLNPRAAGPE
GSLMGIPGSNQGGNNLTLKGWPLTGLEPLRSGLLQQQKPFIQAPQPFHQIQMLTPQHQQL
LLAQQNLTSPSASDESRRFRMLLNNRSMSLGKDGLSNSVGDVVSNVGSPLPAGGHLLPRG
DTDMLIKLKMAQMHQQQQQQQQQQQQNSNPQQHTLSNQQSQSSNHNLHQQDKMGPAGSVT
LDGSMSNSFRGNDQVSKNQTGRKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPG
DVISMPALPHSGTTSKPLMMFGTDGAGTLTSPSNQLWDDKDLELRADMDRLVEDGSLDDN
VESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDK
KAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFM
GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLA
AAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGE
CVHELSCNGNKFHSCVFHPTYPSLLVIGCYQASYLYRCLVFINI*

Transcript Sequence

Transcript ID

Cs4g20380.3
Transcript Infomation

gene=Cs4g20380 CDS=432-3086
Sequence

CAGAAAAATAAAACTAAAAAATGCCAAGTTTCCAATAATTAACAAAAAAATAAAAAGAAG
GAATAAACAGCTCTCAAACAATTAAACCCCCTTTTTTTCTTTTTATGGGCTTTGTAGGTA
TCTTTATCAAGTCTTTCTCTTTCTTATTAATTTCAATTATTATATAACATTTCCATTTGC
TAAAATTAGAGACCTTAGTTTGGATTCTTCTCTCTCATTCAGTCTCTCCCTATAGCACTG
CCTCCTCGTCTATTTCTTTTTTTCCCTACCCCCCAATTTTATTAGTGCTCTGTTTCATAA
ATTGTAGTAAAAGTTTCAATTTATTTTATTTTATTTTTCTTTAGAGTTGAAAATAGCTTG
AGCAAAATTAGTACCTGAGATTCTGACATTATTGTTATTAACTGTATGTGTGAAGTGTTT
GATTCAACATCATGTCTCAAACCAACTGGGAAGCTGATAAAATGTTAGATGTGTACATCC
ATGATTATTTAGTGAAGAGAGATCTAAAGGCTTCTGCTCAAGCTTTTCAAGCTGAAGGAA
AAGTATCGTCTGATCCTGTAGCTATCGATGCACCTGGGGGTTTTCTGTTTGAGTGGTGGT
CGGTTTTTTGGGATATATTCATTGCTAGAACGAATGAGAAGCATTCGGAGGTTGCTGCAT
CCTACATCGAGACACAATTGATTAAGGCACGAGAGCAACAACAGCAACAACAGCAACAAC
AGCAACAACAGCAGCAGCAGCAGCAGCAATCCCAACAGCCGCCACATCAGCAACAACAGC
AGCAGCAGCAGCAGCAACAGCAATTGCAAATGCAACAGATCCTATTGCAGAGGCATGCTC
AACAGCAGCAGCAGCACCAACAGCAACATCAACAGCAGCAGCAACAGCAACAACAGCCGC
CACAACAGCCTCAGCAGCAGCAGCCACAGCAACAGCAGCAGCGTAGGGATGGTGCCCACC
TCCTAAATGGCAATACAAATGGGCTATTGGGAAATGACTCTCTCATGCGACAGAACCCGG
GAACTGCAAATGCCATGGCTACAAGGATGTACGAGGAAAAATTAAAACTGCCAGTGCTGA
GGGATTCTTTGGATGATGCGGCTATGAAACAAAGATTTGGTGAGAATATGGGCCAGCTCT
TGGATCCAAATCATGCCTCCTATATAAAGTCAGCTGCAGCAACTGGCCAGCCCTCAGGGC
AAGTATTGCATGGTACAGCTGGTGGGATGTCTCCGCAGGTTCAAGCCCGGAGTCAACAAC
TGCCTGGGTCCACACCAGATATAAAGAGTGAGATTAATCCAGTATTGAATCCCAGAGCAG
CAGGGCCCGAAGGATCATTAATGGGAATTCCTGGGTCAAATCAAGGTGGTAACAATTTAA
CTTTAAAAGGATGGCCACTCACAGGATTAGAACCGCTGAGGTCTGGGCTACTTCAGCAAC
AGAAGCCTTTCATACAGGCTCCTCAGCCGTTTCATCAAATTCAAATGCTGACACCGCAAC
ACCAGCAACTTCTTCTTGCACAGCAAAATTTGACATCACCTTCTGCTAGTGATGAAAGTA
GAAGATTTAGAATGCTTTTGAATAATCGGAGTATGAGTCTTGGAAAGGATGGCCTCTCAA
ATTCTGTTGGTGATGTGGTTTCCAATGTTGGCTCACCTTTACCTGCTGGTGGCCACCTTC
TGCCTCGTGGAGATACAGATATGCTAATCAAGTTGAAAATGGCTCAGATGCATCAACAAC
AGCAGCAACAACAACAGCAGCAGCAGCAGAACAGTAACCCACAGCAGCACACACTTTCAA
ACCAGCAATCACAGAGTTCAAATCACAATCTTCACCAACAGGATAAAATGGGCCCTGCTG
GCAGCGTGACACTTGATGGTAGCATGTCAAACTCCTTTCGAGGAAATGACCAGGTTTCAA
AAAACCAGACTGGAAGAAAGAGAAAACAGCCGGTGTCCTCTTCAGGTCCTGCCAATAGCT
CAGGGACTGCAAATACTGCAGGACCGTCCCCAAGTTCAGCTCCCTCAACACCATCAACTC
ACACTCCTGGAGATGTGATTTCGATGCCGGCTTTGCCTCATAGTGGTACTACTTCCAAGC
CTTTGATGATGTTTGGCACCGATGGAGCTGGCACTCTTACATCACCATCAAATCAGTTGT
GGGATGATAAAGATCTTGAATTGCGGGCTGATATGGATCGTTTGGTGGAGGATGGGTCCC
TTGATGACAATGTCGAGTCTTTTCTATCACATGATGATACAGACCCCAGAGATGCTGGTG
GTCGTGGTATGGATGTCAGCCAAGGGTTCTCATTTAAGGAAGCAAATTCTGTTAGAGCAA
GCACAAGCAAAGTTATCTGCTGTCACTTTTCTTCAGATGGGAAGTTGCTTGCTACTGGTG
GCCATGACAAAAAGGCTGTACTGTGGCACACGGATACGTTAAAGTCGAAAACAAACCTTG
AAGAGCATTCTTCGTTGATTACTGATGTTCGTTTCAGTCCAAGCATGCCACGGCTTGCAA
CATCTTCATTTGACAAGACTGTCAGAGTTTGGGACGCTGACAACCCTGGCTATTCACTTC
GTACCTTTATGGGACATTCTGCTTCTGTTATGTCTCTGGATTTCCACCCAAATAAAGATG
ATCTCATCTGCTCTTGTGATGGGGATGGTGAAATACGCTATTGGAGTATTAACAATGGTA
GCTGCACAAGAGTTTTCAAGGGTGGTACGGCTCAGATGAGATTCCAGCCCCATCTTGGAA
GGTATCTTGCCGCAGCTGCAGAGAATGTTGTCTCTATACTGGATGCGGAGACTCAAGCCT
GTCGTCTTTCATTGCAGGGACATACTAAACCAATCGATTCTGTGTGTTGGGATCCTTCTG
GTGAGTTGCTAGCATCTGTCAGTGAGGACTCTGTAAGAGTTTGGACAGTTGGATCTGGAA
GTGAAGGGGAATGTGTTCATGAGTTGAGCTGTAATGGGAACAAGTTCCACTCCTGTGTTT
TCCATCCTACATATCCGTCATTGCTGGTGATTGGCTGTTATCAGGCAAGTTACCTGTATC
GTTGTTTGGTATTTATCAATATTTGATGATCATG