Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g20000.1
CDS Infomation

gene=Cs4g20000
Sequence

ATGGTAGAAGTGGCTGAAGTTGAAAATCTAGATTTTAAGTGGGGTAAAAAGAGAGGAATT
GGTGGAAAAAAGAAAGATGTCCAGTTCTATCAATCTTTTACATATGATGGGGTGGAATAT
ACTCTTTATGACTGTGTATATCTGTACAAGGAAGGGGATGCTGAGCCTCACGTTGGTAAA
CTCATAAAAATATGGGAGAATGCTGATAAGGCAAAGAAAGTCAAACTTCTTTGGTTCTTC
CGCCCAAGTGATATTTCCAATTTTCTTGGAAATGTTCAGACACTTGAGAATGAATTAATT
TTGGCATGTGGTGAAGGCGTAGGCCTCACAAATATCAATCCTTTGGAAGCAATTGCTGGA
AAGTGCAATGTTGTTTGCACCTCAAAGGATGCTAGAAATCCACAACCCTCAGATGAAGAA
CTCCAAATCAGTGACTTTATTTTTTGCCGCACCTTTGATGTGGGGCTCCGTAAAGTCTTG
GATAAGATAGATGAAAAGATTGCTGGTATTGAAGTTAAATTTATATTTAACCGACAGGGT
TACCAAAACTCCAGCGTTGCTCTGAAACTTGATTCAAACAAGAAGGAAGTCAGTAAGAAT
GCCACAATAAGTGATGAAACAGTGATTTCAGCCCAGCAAAACATTCCTGAAAGTGTATCT
ACTAAACAGGAGGGTGGTTTTATTGATACTTCAGTTAAACAAGGTGTGGAAGCTTCATTA
ATTAGACAGAATTCTTCACTCTTGGATAATGTAGATTTAGAGTCAGGTGGAAAGGCTAAA
AGCGGTGAAGGACTGGAAGATATTTCTATCAATAGTTCCAATTTGAGGTCAAAAGTAAAA
GAAAATGAGCACACAAAAGTTCTGACAACGAAACAGAAATCTTCGTTTGCTGAGAGGCCT
GTCTCCTCTGTGGATTCAAAAGCTTGGTTGGTTGGGATGAAATCTTCTCTTGGAGAAAAG
GTTTCATCTATAGGAGGTGCTCAGCAAGGTGAAATTGTTAGAACTATTAAACCGGGGATC
ACGTTTGGTGATAAGATTGCATCTAGCTCTAAAGTTGGATTTGAAAAGAGCAAGGCTAAA
AGTAGTAAGGCTCTTGAAACTAAAGAGGAAGTAAAATCATTTAAGGATCCTAATGAATTG
TATAATGGGCCATCTAATAAAGCAAAGTTTGATAGTTCTAGGAAAGTATTTGATGATAAG
ATCAAGAATAGAGTGCAAAAGTTAGGCCTTGACTCTAATGTACATGGTCCAAAGCCTACC
TTAGCTACCATTGCTGATGAAGATAAATCTAAAACTAAGCGAGCAGTAGCAAAGGATCCT
CATGGGATAGACAAAGGCCCTTGCAAGAAGCCAAAGCTTGATGAAGAACTTTTAAAACCT
ACTAGTGGCAAGTTGGTTGAAGCATCTTCCCTCCAACCTTCAATTGTTGAGAACAAAAGT
AATAAGCAAATAGTGGAAGTTACTCGACGACCAAGTTTAGATAGAAGCAAATGGTTCAAA
GAACTTCCATGGGAAGAAAGAATTCGGGTAGCGCATGAGCATGGAACACTTGTCGTGCTT
GAGAATTTGGATCCATCTTATACTTCAACAGTGGTAGAGGATTTAGTATGGCATGCCTTT
AAGGAGAATTGCTCGGCAAAGATGATTCCGCGAGTTGCATTCGCTTCCCCCTATTTTGGC
CAATCCTTTGTAATATTCAAAACAAGAGAGGTTGCGGAGTTGGTTGTTACAAAATTAGAG
GAAGGATGCCTATTGCTATCAAATGGGAGGCCCCTTCTTGGCAGTATTGGAACTCCTTGC
TTTACGGGAAAGCAGTCAAAATTTGTTGGCCATCTTGCACTTGATAAACTTAAGTTCCAG
ATGCAACGGGAGATGAGAGAAGCTGTATCAACTTCACATTGTTCTCAACCTAACTCACTA
GAGTATGATATGGCCATAGAATGGTCTTTGCTACAAGAACGACTGGATTGTGCCTGGAAA
AAGTTGTATGAGCAACAAGAGCTGGAGCTGAAAAAACTTAAGGTGAAGCTCAAGTCCAAA
TGA

Peptide Sequence

PEP ID

Cs4g20000.1
PEP Infomation
Sequence

MVEVAEVENLDFKWGKKRGIGGKKKDVQFYQSFTYDGVEYTLYDCVYLYKEGDAEPHVGK
LIKIWENADKAKKVKLLWFFRPSDISNFLGNVQTLENELILACGEGVGLTNINPLEAIAG
KCNVVCTSKDARNPQPSDEELQISDFIFCRTFDVGLRKVLDKIDEKIAGIEVKFIFNRQG
YQNSSVALKLDSNKKEVSKNATISDETVISAQQNIPESVSTKQEGGFIDTSVKQGVEASL
IRQNSSLLDNVDLESGGKAKSGEGLEDISINSSNLRSKVKENEHTKVLTTKQKSSFAERP
VSSVDSKAWLVGMKSSLGEKVSSIGGAQQGEIVRTIKPGITFGDKIASSSKVGFEKSKAK
SSKALETKEEVKSFKDPNELYNGPSNKAKFDSSRKVFDDKIKNRVQKLGLDSNVHGPKPT
LATIADEDKSKTKRAVAKDPHGIDKGPCKKPKLDEELLKPTSGKLVEASSLQPSIVENKS
NKQIVEVTRRPSLDRSKWFKELPWEERIRVAHEHGTLVVLENLDPSYTSTVVEDLVWHAF
KENCSAKMIPRVAFASPYFGQSFVIFKTREVAELVVTKLEEGCLLLSNGRPLLGSIGTPC
FTGKQSKFVGHLALDKLKFQMQREMREAVSTSHCSQPNSLEYDMAIEWSLLQERLDCAWK
KLYEQQELELKKLKVKLKSK*

Transcript Sequence

Transcript ID

Cs4g20000.1
Transcript Infomation

gene=Cs4g20000 CDS=298-2340
Sequence

GAAGCGGACAGACGATCCGGAGGGAGGGAACATAAATAATACAAGGCGCGCTTTTCGCTA
GGGTTTTTTTTTTTTTTAATTTTTCTTTTTTCTTTTTTCTCATTCCAAAAGACAGAGGCC
AGTTTTAAAGGACAGAGGCCGCTACTCTAGCTCTTCGGATACTGTGAGATTCCCGCCGAT
TCTACTCTCTCCGGCCACTACATTACTCATTTTCTCTTTCTTATCTGTTTAGCTTTCGGG
ACAGGTTCTATTTAAAATTTATTTCTCTGATCAGAGAGAGAGGCCTGCTATGGAAAGATG
GTAGAAGTGGCTGAAGTTGAAAATCTAGATTTTAAGTGGGGTAAAAAGAGAGGAATTGGT
GGAAAAAAGAAAGATGTCCAGTTCTATCAATCTTTTACATATGATGGGGTGGAATATACT
CTTTATGACTGTGTATATCTGTACAAGGAAGGGGATGCTGAGCCTCACGTTGGTAAACTC
ATAAAAATATGGGAGAATGCTGATAAGGCAAAGAAAGTCAAACTTCTTTGGTTCTTCCGC
CCAAGTGATATTTCCAATTTTCTTGGAAATGTTCAGACACTTGAGAATGAATTAATTTTG
GCATGTGGTGAAGGCGTAGGCCTCACAAATATCAATCCTTTGGAAGCAATTGCTGGAAAG
TGCAATGTTGTTTGCACCTCAAAGGATGCTAGAAATCCACAACCCTCAGATGAAGAACTC
CAAATCAGTGACTTTATTTTTTGCCGCACCTTTGATGTGGGGCTCCGTAAAGTCTTGGAT
AAGATAGATGAAAAGATTGCTGGTATTGAAGTTAAATTTATATTTAACCGACAGGGTTAC
CAAAACTCCAGCGTTGCTCTGAAACTTGATTCAAACAAGAAGGAAGTCAGTAAGAATGCC
ACAATAAGTGATGAAACAGTGATTTCAGCCCAGCAAAACATTCCTGAAAGTGTATCTACT
AAACAGGAGGGTGGTTTTATTGATACTTCAGTTAAACAAGGTGTGGAAGCTTCATTAATT
AGACAGAATTCTTCACTCTTGGATAATGTAGATTTAGAGTCAGGTGGAAAGGCTAAAAGC
GGTGAAGGACTGGAAGATATTTCTATCAATAGTTCCAATTTGAGGTCAAAAGTAAAAGAA
AATGAGCACACAAAAGTTCTGACAACGAAACAGAAATCTTCGTTTGCTGAGAGGCCTGTC
TCCTCTGTGGATTCAAAAGCTTGGTTGGTTGGGATGAAATCTTCTCTTGGAGAAAAGGTT
TCATCTATAGGAGGTGCTCAGCAAGGTGAAATTGTTAGAACTATTAAACCGGGGATCACG
TTTGGTGATAAGATTGCATCTAGCTCTAAAGTTGGATTTGAAAAGAGCAAGGCTAAAAGT
AGTAAGGCTCTTGAAACTAAAGAGGAAGTAAAATCATTTAAGGATCCTAATGAATTGTAT
AATGGGCCATCTAATAAAGCAAAGTTTGATAGTTCTAGGAAAGTATTTGATGATAAGATC
AAGAATAGAGTGCAAAAGTTAGGCCTTGACTCTAATGTACATGGTCCAAAGCCTACCTTA
GCTACCATTGCTGATGAAGATAAATCTAAAACTAAGCGAGCAGTAGCAAAGGATCCTCAT
GGGATAGACAAAGGCCCTTGCAAGAAGCCAAAGCTTGATGAAGAACTTTTAAAACCTACT
AGTGGCAAGTTGGTTGAAGCATCTTCCCTCCAACCTTCAATTGTTGAGAACAAAAGTAAT
AAGCAAATAGTGGAAGTTACTCGACGACCAAGTTTAGATAGAAGCAAATGGTTCAAAGAA
CTTCCATGGGAAGAAAGAATTCGGGTAGCGCATGAGCATGGAACACTTGTCGTGCTTGAG
AATTTGGATCCATCTTATACTTCAACAGTGGTAGAGGATTTAGTATGGCATGCCTTTAAG
GAGAATTGCTCGGCAAAGATGATTCCGCGAGTTGCATTCGCTTCCCCCTATTTTGGCCAA
TCCTTTGTAATATTCAAAACAAGAGAGGTTGCGGAGTTGGTTGTTACAAAATTAGAGGAA
GGATGCCTATTGCTATCAAATGGGAGGCCCCTTCTTGGCAGTATTGGAACTCCTTGCTTT
ACGGGAAAGCAGTCAAAATTTGTTGGCCATCTTGCACTTGATAAACTTAAGTTCCAGATG
CAACGGGAGATGAGAGAAGCTGTATCAACTTCACATTGTTCTCAACCTAACTCACTAGAG
TATGATATGGCCATAGAATGGTCTTTGCTACAAGAACGACTGGATTGTGCCTGGAAAAAG
TTGTATGAGCAACAAGAGCTGGAGCTGAAAAAACTTAAGGTGAAGCTCAAGTCCAAATGA