Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g18260.1
CDS Infomation

gene=Cs4g18260
Sequence

ATGCAAGAAATGGAGCTACACGATTTATCAGACGACGCCGATTACGCCGCGTCTATGCAA
CAAGGATCATCAAGCATGATGAGGAGCGATAGCAGCAAGAGAAGCTCGTCGAGCGAATCG
GAAGGCGCTGAACTGGTTTATTTGAAAGATAACGTGACTATTCATCCTACTCAGTTTGCA
TCTGAACGAATTAGCGGAAGATTAAAGCTAATTAAACAAGGATCCTCTCTCTTCATGACT
TGGATTCCGTACAAAGGCCAAAACTCCAACACTAGGCTATCTGAGAAAGATAGGAATTTG
TATACCATAAGGGCAGTGCCATTTACAGAAGTGCGGTCCATTCGCCGACACACTCCGGCT
TTTGGGTGGCAGTACATAATTGTTGTTTTATCATCAGGACTTGCTTTTCCTCCTCTTTAC
TTCTACACTGGAGGAGTTAGGGAGTTCCTCGCTACCATAAAGCAACACGTCTTACTTGTG
AGGTCAGTAGAAGATGCAAATGTCTTTCTTGTTAATGATTTTGATAACCGTCTACAGAGA
ACTTTATCTTCTTTGGAGCTGCCTAGGGCAGTTTCTATTGCAAGTGGGTCATCAACACCT
GTTTCAATTGGCGACTCTCCTACAAATGTGAACCTAGAGAGGACCAATGGAGGCCTTGGC
CATGATAGTCACAGTATTTCTCAATTCCATGGGAGACAGAAGCAAAAGGCTCAAGATCCT
GCTCGGGATATTTCAATTCAAGTACTGGAAAAATTCTCTCTTGTAACGAAATTTGCCCGC
GAAACAACTTCTCAACTATTTCGTGAAAATCATAGCAATGGCTTTGGTGCTTTTGAGAAA
AAATTTGATAGCCAGTCTGCCCTAGATTTCGATCACAAGGCATCCTATGATACAGAGACA
ATTGTTAATGAAATCCCAGTAGCCCCAGATCCTGTGGAGTTCGATAAACTAACACTAGTT
TGGGGAAAACCCCGACAGCCTCCCTTGGGATCTGAAGAGTGGACAACTTTTTTGGACAAT
GAGGGGCGAGTTATGGATTCAAATGCTTTAAGGAAAAGAATATTCTATGGGGGAGTTGAT
CACAAATTACGGAGAGAGGTTTGGGCGTTCTTGTTGGGATACTATGCATATGATTCAACA
TATGCTGAGAGGGAGTATCTTAGGTGCATTAAGAAGTCAGAGTATGAGAACATAAAGAGG
CAGTGGCAGAGTATCTCACCTGAACAGGCAAGAAGGTTTACAAAATTCAGGGAGAGGAAA
GGGCTTATAGATAAAGATGTGGTGAGGACTGATAGGTCGGTCACTTTCTTCGATGGGGAT
GATAATCCAAATGTGCATCTTCTACGTGATATTCTGTTGACATACTCTTTCTATAACTTT
GATCTTGGTTATTGTCAGGGTATGAGTGATCTGCTGTCCCCAATACTGTTTGTAATGGAG
GATGAGTCGCAATCATTTTGGTGTTTTGTGGCATTGATGGAGCGCCTTGGTCCTAATTTT
AATCGTGACCAAAATGGCATGCACAGCCAACTTTTTGCACTATCTAAGTTGGTGGAGTTG
CTGGACAATCCGTTGCATAACTATTTCAAGCAGAATGATTGCTTGAATTATTTCTTCTGC
TTTCGCTGGGTTCTAATACAATTTAAAAGAGAATTTGAATATGAGAAAACAATGCGATTG
TGGGAGGTATTATGGACTCATTATCTGTCTGAGCATCTGCACCTGTATGTATGTGTTGCA
ATTTTGAAGCGGTATCGCAACAAGATAATGGGGGAGCAAATGGACTTTGACACGCTCTTG
AAATTTATTAATGAGCTGAGTGGTCGGATTGACCTTGATGCAATCCTTAGAGATGCTGAG
GCTTTGTGTATATGTGCTGGCGAAAACGGTGCTGCGAGCATTCCTCCTGGAACTCCGCCT
TCATTGCCTATTGACAATGGTTTGTTATATTCTCAACAAGAAGATGAAGTATTGTGA

Peptide Sequence

PEP ID

Cs4g18260.1
PEP Infomation
Sequence

MQEMELHDLSDDADYAASMQQGSSSMMRSDSSKRSSSSESEGAELVYLKDNVTIHPTQFA
SERISGRLKLIKQGSSLFMTWIPYKGQNSNTRLSEKDRNLYTIRAVPFTEVRSIRRHTPA
FGWQYIIVVLSSGLAFPPLYFYTGGVREFLATIKQHVLLVRSVEDANVFLVNDFDNRLQR
TLSSLELPRAVSIASGSSTPVSIGDSPTNVNLERTNGGLGHDSHSISQFHGRQKQKAQDP
ARDISIQVLEKFSLVTKFARETTSQLFRENHSNGFGAFEKKFDSQSALDFDHKASYDTET
IVNEIPVAPDPVEFDKLTLVWGKPRQPPLGSEEWTTFLDNEGRVMDSNALRKRIFYGGVD
HKLRREVWAFLLGYYAYDSTYAEREYLRCIKKSEYENIKRQWQSISPEQARRFTKFRERK
GLIDKDVVRTDRSVTFFDGDDNPNVHLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVME
DESQSFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDNPLHNYFKQNDCLNYFFC
FRWVLIQFKREFEYEKTMRLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLL
KFINELSGRIDLDAILRDAEALCICAGENGAASIPPGTPPSLPIDNGLLYSQQEDEVL*

Transcript Sequence

Transcript ID

Cs4g18260.1
Transcript Infomation

gene=Cs4g18260 CDS=235-2211
Sequence

AGTTTTGAAATAAGTGGATAGTAATTTTTCAGGAAAAAAAAGAAAAGAAGAAGAGAAGAT
ACCGAAAATGACTGTGCAGCAGGGACCCACCACACCTTCCCTCGCTATTCCTCCCTCCTC
TCGCATCGGCCAGGATCCCAATTCTTAATCACGAAGCAAAATCAAATCACTGCTCTCTGT
ACCCTCGCTCTCATTCTCATCCCTACACTATATAGTTGATTAATCAGCAAAATCATGCAA
GAAATGGAGCTACACGATTTATCAGACGACGCCGATTACGCCGCGTCTATGCAACAAGGA
TCATCAAGCATGATGAGGAGCGATAGCAGCAAGAGAAGCTCGTCGAGCGAATCGGAAGGC
GCTGAACTGGTTTATTTGAAAGATAACGTGACTATTCATCCTACTCAGTTTGCATCTGAA
CGAATTAGCGGAAGATTAAAGCTAATTAAACAAGGATCCTCTCTCTTCATGACTTGGATT
CCGTACAAAGGCCAAAACTCCAACACTAGGCTATCTGAGAAAGATAGGAATTTGTATACC
ATAAGGGCAGTGCCATTTACAGAAGTGCGGTCCATTCGCCGACACACTCCGGCTTTTGGG
TGGCAGTACATAATTGTTGTTTTATCATCAGGACTTGCTTTTCCTCCTCTTTACTTCTAC
ACTGGAGGAGTTAGGGAGTTCCTCGCTACCATAAAGCAACACGTCTTACTTGTGAGGTCA
GTAGAAGATGCAAATGTCTTTCTTGTTAATGATTTTGATAACCGTCTACAGAGAACTTTA
TCTTCTTTGGAGCTGCCTAGGGCAGTTTCTATTGCAAGTGGGTCATCAACACCTGTTTCA
ATTGGCGACTCTCCTACAAATGTGAACCTAGAGAGGACCAATGGAGGCCTTGGCCATGAT
AGTCACAGTATTTCTCAATTCCATGGGAGACAGAAGCAAAAGGCTCAAGATCCTGCTCGG
GATATTTCAATTCAAGTACTGGAAAAATTCTCTCTTGTAACGAAATTTGCCCGCGAAACA
ACTTCTCAACTATTTCGTGAAAATCATAGCAATGGCTTTGGTGCTTTTGAGAAAAAATTT
GATAGCCAGTCTGCCCTAGATTTCGATCACAAGGCATCCTATGATACAGAGACAATTGTT
AATGAAATCCCAGTAGCCCCAGATCCTGTGGAGTTCGATAAACTAACACTAGTTTGGGGA
AAACCCCGACAGCCTCCCTTGGGATCTGAAGAGTGGACAACTTTTTTGGACAATGAGGGG
CGAGTTATGGATTCAAATGCTTTAAGGAAAAGAATATTCTATGGGGGAGTTGATCACAAA
TTACGGAGAGAGGTTTGGGCGTTCTTGTTGGGATACTATGCATATGATTCAACATATGCT
GAGAGGGAGTATCTTAGGTGCATTAAGAAGTCAGAGTATGAGAACATAAAGAGGCAGTGG
CAGAGTATCTCACCTGAACAGGCAAGAAGGTTTACAAAATTCAGGGAGAGGAAAGGGCTT
ATAGATAAAGATGTGGTGAGGACTGATAGGTCGGTCACTTTCTTCGATGGGGATGATAAT
CCAAATGTGCATCTTCTACGTGATATTCTGTTGACATACTCTTTCTATAACTTTGATCTT
GGTTATTGTCAGGGTATGAGTGATCTGCTGTCCCCAATACTGTTTGTAATGGAGGATGAG
TCGCAATCATTTTGGTGTTTTGTGGCATTGATGGAGCGCCTTGGTCCTAATTTTAATCGT
GACCAAAATGGCATGCACAGCCAACTTTTTGCACTATCTAAGTTGGTGGAGTTGCTGGAC
AATCCGTTGCATAACTATTTCAAGCAGAATGATTGCTTGAATTATTTCTTCTGCTTTCGC
TGGGTTCTAATACAATTTAAAAGAGAATTTGAATATGAGAAAACAATGCGATTGTGGGAG
GTATTATGGACTCATTATCTGTCTGAGCATCTGCACCTGTATGTATGTGTTGCAATTTTG
AAGCGGTATCGCAACAAGATAATGGGGGAGCAAATGGACTTTGACACGCTCTTGAAATTT
ATTAATGAGCTGAGTGGTCGGATTGACCTTGATGCAATCCTTAGAGATGCTGAGGCTTTG
TGTATATGTGCTGGCGAAAACGGTGCTGCGAGCATTCCTCCTGGAACTCCGCCTTCATTG
CCTATTGACAATGGTTTGTTATATTCTCAACAAGAAGATGAAGTATTGTGAATAAAATTC
CTTTCGGGTCTGTGGATGTGGAAATATTAAGTGCATCATGTAATTAGCTAATTTTTCTCG
ACAGTTTTAGCATTATAAAATACAGATATCAGATAAAATAACCATGTTTTGCCATTAAAT
CCTGGGCCCTAATTAACTTCCGTTAGCTTAAATTCCTTGATGTATCCAACAGTTTGTTCC
TTACTGCATTTTATTTTGGCTCGTGTGCCGAAAGCGCTATATTTTGAATTGGAAATGGTC
AAAAGGCGCCAGATTCTAACGGGTTTTTCCGAGTTCTGAAAATTGGCTCTTAAATTTATT
CGTGTTAGCCGAGTTGTTCATTTGTAAACTGCAGCGCGCGTGGAGTGCAATCAAATAAAA
GGGTTTCATTAAGTTTCACCTTCCCGGTGGGGTAAAAGGACATGCATTATTTT