Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g18040.1
CDS Infomation

gene=Cs4g18040
Sequence

ATGGGAACGAACAACGAAACGACGTCGTTATCATTAGCGCAAAACGCAGCGCACCGAGGC
GCCGGTGGAAAGTTAATGAAACAGTCATCAAGGAAACCACCGGCGACGCCCTACGCGCGG
CCGCAGCAACAAAGTCGGTGGCTCTCGAAGCTTGTCGATCCGGCTTACCGGCTCATAACA
GGCGGCGCCACACGAATCTTGCCCTCTTTCTTTTCAAATTATAAATCTCATCAACACTCC
CTTCCTGCTCCTACCGATCAACAACTAGAAGATCATCACGAAATATTGGATGCAGAGGAG
GAGGAATGTGCTGAAGACGGTGCTGGTGTAAATCATGGAGAATCCAGATCAACTGATGTT
GCTGGTCCTAGCAGCACTGCTGATAGATCAAAGAATGGTTTTGACTTTGATGGGTCCAAA
CAAGACAAGAGAGAGAATGCAGCTGATAATGACAGGCTTTCTGAAATTGAGCAGCTATTA
GAGGGCAAAAGCTTTTCTAGGGATGAAATTCATAGATTGATAGAGATAATACATTCAAGG
GCTGTTGATCTTCCTGAACAAGAAAAGAAATTACTAAGCACGAATGCAAAAGGAGATGCT
GAGAGGCCCATGGTTGCACTTGAAAATCCAAGAAAGTCAATTGAAGAAAAGCAGGAAGAT
TTGAGTAAAACTCCCTGGGGAACCTCAACTACACCTCTGCAGTCATCTATGCAAGATAAA
GTTGGTGCTTCACCAATTGATATTGCAAAAGCATATATGGGAACCCGAACATCTGAATTA
GGCCTTGGTTCTAAGAGTTTATTATCGAAAGATGAAAGAATATCACCAAATGGTAATGAA
TTTGCACTAAAACCATATTTTCCATCACCATCACATAAGCCATCAACATGCTGGCCAGGT
GCCATGTTACAGGATCAACGTGATTATCTGACCCCACATAGTGAAAGAGGTAGATATGGG
CTTCATAATTTTCCCCGAACTCCTTATTCTAGAACCATCTTTTCCAAGTCCAAGTCCGGG
CTGACTCAATTACAAGGTGATAGTAATAAAGGCCTGAACACATCAACTCCTTTGCAGCAG
TCGCAAACTCCTATATACGGGCAGTTGAAGTCAAGTAGAAATGCATTAGATAATGGCCAA
GGATCAGCTGGACCCATTCGTAGGACACGGCACAAAGCTGCTGTAGAATCTCTGGCCAGA
GGGTCTGTGAAGTTTCATTCCTCTGTAGATGGCCTTTCTCCAGTGGGACATTCCCATTTT
TCAGAATTTCCTGCTGTGAAGAAGAATTTAGAACTTGGAGGAACAAGTGGCTCTTCAATA
TTCCAGTTAGCAGACAGGAAGCCACTAAGCTCGGAAGTAGGCGTCCCACCTGTTCATCCA
CATTCTAGTCAGATGGCTAGGACAATACTGGAGCATCTTGAGAGAAACCTGCCCACTCCT
AAAGATAAGTCTGCTGAGTTGGGGCTAGCCACTTCTCGGAAAAAAATCCAGTCTTCCGTT
AGTGCTTCTGTGGTGAGCGAGCAGAATATTTTTCTGAATTTCGGAGGTTGTGACTCTAGG
AAGAAGGGAGATGAGGGCGACAACAAAAATTCCGCACAAGTGAATGAAGCTAGAGTGAAC
TCCTTTAAGGTTACTTCTCCGGAGAATACTAAAGTATCTAAAGATGGCATAAATGAAACC
TCTTTAGCTTCAAAAACAAAAATTGATGGCGTACTTCCCATACAAGGTGGCCGTGCGGGA
TCTTCTCACGATTTCAGGAAAAATCAAGATTTTGATATCGAGAGTAAAAATGAGAATAAC
TCAAAGACTGTTCCAAATGCTGCCGATAGTGGGGTGCTAAATTTACAGAGGAAGCCTCCA
TCTCACTCTGTAGGGGACACTAAATCAGTTTTGCCTTCTATTTCTGTTGGCAAGCCGAAC
TGGAAGTGGACATTTTCTTCTGATAGTAGCACTGGCTTCAGTTTTCCTGTTTCTGCATCC
AGTGGGGTTTTCTCTGAGCCTCCAACACCATCCATTTTGCCATCATTCCTTGCTAATGAC
GTGCAGCAGCCAAAAGAAGGACCTGCAGTTCCTAAGTATAGCTTTGGGTTGAATACATCT
ACTTCTCGACTTGTTTTTGCTTTCCCTTCTACAAGCAGTGCCCCCACAAATGATGATGCT
TCAGATCTTAAGTTCAACTTCAGATCAGACAAGACGACAAGGATATCTTTCAGTTCAATT
GGGAAAGATGCCATTTGCTATTAG

Peptide Sequence

PEP ID

Cs4g18040.1
PEP Infomation
Sequence

MGTNNETTSLSLAQNAAHRGAGGKLMKQSSRKPPATPYARPQQQSRWLSKLVDPAYRLIT
GGATRILPSFFSNYKSHQHSLPAPTDQQLEDHHEILDAEEEECAEDGAGVNHGESRSTDV
AGPSSTADRSKNGFDFDGSKQDKRENAADNDRLSEIEQLLEGKSFSRDEIHRLIEIIHSR
AVDLPEQEKKLLSTNAKGDAERPMVALENPRKSIEEKQEDLSKTPWGTSTTPLQSSMQDK
VGASPIDIAKAYMGTRTSELGLGSKSLLSKDERISPNGNEFALKPYFPSPSHKPSTCWPG
AMLQDQRDYLTPHSERGRYGLHNFPRTPYSRTIFSKSKSGLTQLQGDSNKGLNTSTPLQQ
SQTPIYGQLKSSRNALDNGQGSAGPIRRTRHKAAVESLARGSVKFHSSVDGLSPVGHSHF
SEFPAVKKNLELGGTSGSSIFQLADRKPLSSEVGVPPVHPHSSQMARTILEHLERNLPTP
KDKSAELGLATSRKKIQSSVSASVVSEQNIFLNFGGCDSRKKGDEGDNKNSAQVNEARVN
SFKVTSPENTKVSKDGINETSLASKTKIDGVLPIQGGRAGSSHDFRKNQDFDIESKNENN
SKTVPNAADSGVLNLQRKPPSHSVGDTKSVLPSISVGKPNWKWTFSSDSSTGFSFPVSAS
SGVFSEPPTPSILPSFLANDVQQPKEGPAVPKYSFGLNTSTSRLVFAFPSTSSAPTNDDA
SDLKFNFRSDKTTRISFSSIGKDAICY*

Transcript Sequence

Transcript ID

Cs4g18040.1
Transcript Infomation

gene=Cs4g18040 CDS=127-2370
Sequence

GAGACTTCAGACTAGTGAGTTGCGACAAAGGGACAAAGTTGGAAAAAGCCAAAAAGAAGA
GTCGAAAAGCGCGCTTCCACAGTAAGCACAAAGCGAGAGCTTTCTTGTGAGAAACTAAAA
GGAGGGATGGGAACGAACAACGAAACGACGTCGTTATCATTAGCGCAAAACGCAGCGCAC
CGAGGCGCCGGTGGAAAGTTAATGAAACAGTCATCAAGGAAACCACCGGCGACGCCCTAC
GCGCGGCCGCAGCAACAAAGTCGGTGGCTCTCGAAGCTTGTCGATCCGGCTTACCGGCTC
ATAACAGGCGGCGCCACACGAATCTTGCCCTCTTTCTTTTCAAATTATAAATCTCATCAA
CACTCCCTTCCTGCTCCTACCGATCAACAACTAGAAGATCATCACGAAATATTGGATGCA
GAGGAGGAGGAATGTGCTGAAGACGGTGCTGGTGTAAATCATGGAGAATCCAGATCAACT
GATGTTGCTGGTCCTAGCAGCACTGCTGATAGATCAAAGAATGGTTTTGACTTTGATGGG
TCCAAACAAGACAAGAGAGAGAATGCAGCTGATAATGACAGGCTTTCTGAAATTGAGCAG
CTATTAGAGGGCAAAAGCTTTTCTAGGGATGAAATTCATAGATTGATAGAGATAATACAT
TCAAGGGCTGTTGATCTTCCTGAACAAGAAAAGAAATTACTAAGCACGAATGCAAAAGGA
GATGCTGAGAGGCCCATGGTTGCACTTGAAAATCCAAGAAAGTCAATTGAAGAAAAGCAG
GAAGATTTGAGTAAAACTCCCTGGGGAACCTCAACTACACCTCTGCAGTCATCTATGCAA
GATAAAGTTGGTGCTTCACCAATTGATATTGCAAAAGCATATATGGGAACCCGAACATCT
GAATTAGGCCTTGGTTCTAAGAGTTTATTATCGAAAGATGAAAGAATATCACCAAATGGT
AATGAATTTGCACTAAAACCATATTTTCCATCACCATCACATAAGCCATCAACATGCTGG
CCAGGTGCCATGTTACAGGATCAACGTGATTATCTGACCCCACATAGTGAAAGAGGTAGA
TATGGGCTTCATAATTTTCCCCGAACTCCTTATTCTAGAACCATCTTTTCCAAGTCCAAG
TCCGGGCTGACTCAATTACAAGGTGATAGTAATAAAGGCCTGAACACATCAACTCCTTTG
CAGCAGTCGCAAACTCCTATATACGGGCAGTTGAAGTCAAGTAGAAATGCATTAGATAAT
GGCCAAGGATCAGCTGGACCCATTCGTAGGACACGGCACAAAGCTGCTGTAGAATCTCTG
GCCAGAGGGTCTGTGAAGTTTCATTCCTCTGTAGATGGCCTTTCTCCAGTGGGACATTCC
CATTTTTCAGAATTTCCTGCTGTGAAGAAGAATTTAGAACTTGGAGGAACAAGTGGCTCT
TCAATATTCCAGTTAGCAGACAGGAAGCCACTAAGCTCGGAAGTAGGCGTCCCACCTGTT
CATCCACATTCTAGTCAGATGGCTAGGACAATACTGGAGCATCTTGAGAGAAACCTGCCC
ACTCCTAAAGATAAGTCTGCTGAGTTGGGGCTAGCCACTTCTCGGAAAAAAATCCAGTCT
TCCGTTAGTGCTTCTGTGGTGAGCGAGCAGAATATTTTTCTGAATTTCGGAGGTTGTGAC
TCTAGGAAGAAGGGAGATGAGGGCGACAACAAAAATTCCGCACAAGTGAATGAAGCTAGA
GTGAACTCCTTTAAGGTTACTTCTCCGGAGAATACTAAAGTATCTAAAGATGGCATAAAT
GAAACCTCTTTAGCTTCAAAAACAAAAATTGATGGCGTACTTCCCATACAAGGTGGCCGT
GCGGGATCTTCTCACGATTTCAGGAAAAATCAAGATTTTGATATCGAGAGTAAAAATGAG
AATAACTCAAAGACTGTTCCAAATGCTGCCGATAGTGGGGTGCTAAATTTACAGAGGAAG
CCTCCATCTCACTCTGTAGGGGACACTAAATCAGTTTTGCCTTCTATTTCTGTTGGCAAG
CCGAACTGGAAGTGGACATTTTCTTCTGATAGTAGCACTGGCTTCAGTTTTCCTGTTTCT
GCATCCAGTGGGGTTTTCTCTGAGCCTCCAACACCATCCATTTTGCCATCATTCCTTGCT
AATGACGTGCAGCAGCCAAAAGAAGGACCTGCAGTTCCTAAGTATAGCTTTGGGTTGAAT
ACATCTACTTCTCGACTTGTTTTTGCTTTCCCTTCTACAAGCAGTGCCCCCACAAATGAT
GATGCTTCAGATCTTAAGTTCAACTTCAGATCAGACAAGACGACAAGGATATCTTTCAGT
TCAATTGGGAAAGATGCCATTTGCTATTAGTGAAATGACTGTCATTTTTCAATTTTTCTT
TTTCTTTTGCATTTGGTTTCTATACCCAGATTTTTGTTTAAGCTTTGTTTCTAGTAGAAG
AGTATTGTTATTGTGCTTTCACCTTCATTTAGATCAAAGAAGCAAGCAGTAAAGGAATTG
CCTAAATTTAAAAATCTGTCCATAACTGCTGCTGCAATTCTTGGTTTACAACTATTAGCT
TAGTGAGAAGTAAAGAGCTGCTCAAATTTCTTTTTCTTTTCCTAGCACATTGGGAATCAG
ATCATCACAATCGCATGTTATTCTCTTAT