Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g17990.1
CDS Infomation

gene=Cs4g17990
Sequence

ATGAAGAAGCAAACTAGGAGGGTTGCGAAGTATGAAGTTGGGCGAACAATTGGCGAAGGA
ACCTTCGCCAAGGTTAGGTTTGCACAAAATAGGGAGACTGGAGAGAGTGTGGCCATGAAA
GTTTTGGCTAAAAGTACCATTCTTAAGCACAGAATGGTTGATCAGATTAAAAGAGAGATA
TCCATCATGAAGATTGTCAGACATCCCAACATAGTTCGGTTGCATGAGGTTTTGGCAAGC
CGAACAAAGGTATATATCATTCTGGAGTTCGTAACTGGAGGAGAGCTCTTTGATAAAATT
GTTCACCAAGGTAGACTTTTGGAAAATGATTGTAGGCGATACTTTCAACAGCTTATAGAT
GCGGTTGCTCATTGTCACAGTAAGGGTGTATACCACAGAGACCTAAAGCCTGAAAATCTT
CTTCTAGATTCTTATGGAAATTTGAAGGTTTCTGACTTTGGACTGAGTGCATTGCCCCAG
CAAGGTGTCGAACTTCTTCACACCACTTGTGGAACTCCAAATTATGTTGCACCTGAGGTC
CTCAGCAACCGCGGCTATGATGGTTCTGCTGCTGATGTGTGGTCATGCGGCGTCATCTTG
TTTGTTCTTATGGCTGGATATCTTCCTTTTGGGGAGACAGACCTTCCAACCTTATACAAA
AAGATAAATGCTGCTGAATTTTCCTGTCCGTTTTGGTTTTCAACTGGGGCTACGTCATTG
ATCCATAAGATACTTGACCCAAATCCAAAAACTCGTATTCGGATTGAAGGAATAAGAAAA
CATCCATGGTTTCGGAAAAACTATAATCCTGTCAAATGTAGCGAGGAAGAGGAAGTGAAT
TTGGATGATGTCCATGCCGTTTTTGATGACATCGAGGACCAGTATGTAGCTGAGCAGTCA
GAAAATAAAGTCGGAGGTCCTCTCCTAATGAATGCATTTGAGATGATTACTCTATCCCAG
GGTTTGAATCTGGCAGCATTGTTTGACAGGCGACAGGATTATGTTAAAAGGCAAACTCGT
TTTGTATCCCGCCAACCAGCACAAGTTATACTTTCAAATATTGAAGCTGTTGCAGAATCT
TTGTCTCTTAAAGTGCATACCCGCAATTATAAGACAAGACTGGAAGGAGTATCTGCAAAT
AAGACTGGACAATTTGCTGTTGTTCTGGAAGTTTTTGAAGTTGCACCATCCCTTTTCATG
GTTGATGTTCGGAAGGCTGCTGGAGATACTCTTGAATATCACAAGTTTTACAAGAATTTC
TGCGCTAAATTAGAAAATATCATCTGGAAACCGACAGAGGGCTCCAGTCTGCTTAGGACA
ATGAGTTGCTGA

Peptide Sequence

PEP ID

Cs4g17990.1
PEP Infomation
Sequence

MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI
SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID
AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV
LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL
IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS
ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES
LSLKVHTRNYKTRLEGVSANKTGQFAVVLEVFEVAPSLFMVDVRKAAGDTLEYHKFYKNF
CAKLENIIWKPTEGSSLLRTMSC*

Transcript Sequence

Transcript ID

Cs4g17990.1
Transcript Infomation

gene=Cs4g17990 CDS=301-1632
Sequence

CAAAATTGGTACCTAGATGTTATTACCTTTCGTTATATTTTAACAAAATTATTTTAAAAA
GCGTTAATTTTATAAAAATATATATTTAAAAAAATTATTTTTAAAAAATTAATAAAAAAT
GCGGTTTACTGTATAATTCGTGTCGTGTGTTTTGATCGCTGTAAGCAAGTACCTCAACGG
AGAAGTACCCCGGCAAGTTCAATTCATCGTGTACGGTGCTTCTTTTATATCAGCTCGGCG
GCTTTGGAGGAAAAACGGAGGCGTTTTGAAGGTGAAATGCGAGTATTGAATTGAGGAATC
ATGAAGAAGCAAACTAGGAGGGTTGCGAAGTATGAAGTTGGGCGAACAATTGGCGAAGGA
ACCTTCGCCAAGGTTAGGTTTGCACAAAATAGGGAGACTGGAGAGAGTGTGGCCATGAAA
GTTTTGGCTAAAAGTACCATTCTTAAGCACAGAATGGTTGATCAGATTAAAAGAGAGATA
TCCATCATGAAGATTGTCAGACATCCCAACATAGTTCGGTTGCATGAGGTTTTGGCAAGC
CGAACAAAGGTATATATCATTCTGGAGTTCGTAACTGGAGGAGAGCTCTTTGATAAAATT
GTTCACCAAGGTAGACTTTTGGAAAATGATTGTAGGCGATACTTTCAACAGCTTATAGAT
GCGGTTGCTCATTGTCACAGTAAGGGTGTATACCACAGAGACCTAAAGCCTGAAAATCTT
CTTCTAGATTCTTATGGAAATTTGAAGGTTTCTGACTTTGGACTGAGTGCATTGCCCCAG
CAAGGTGTCGAACTTCTTCACACCACTTGTGGAACTCCAAATTATGTTGCACCTGAGGTC
CTCAGCAACCGCGGCTATGATGGTTCTGCTGCTGATGTGTGGTCATGCGGCGTCATCTTG
TTTGTTCTTATGGCTGGATATCTTCCTTTTGGGGAGACAGACCTTCCAACCTTATACAAA
AAGATAAATGCTGCTGAATTTTCCTGTCCGTTTTGGTTTTCAACTGGGGCTACGTCATTG
ATCCATAAGATACTTGACCCAAATCCAAAAACTCGTATTCGGATTGAAGGAATAAGAAAA
CATCCATGGTTTCGGAAAAACTATAATCCTGTCAAATGTAGCGAGGAAGAGGAAGTGAAT
TTGGATGATGTCCATGCCGTTTTTGATGACATCGAGGACCAGTATGTAGCTGAGCAGTCA
GAAAATAAAGTCGGAGGTCCTCTCCTAATGAATGCATTTGAGATGATTACTCTATCCCAG
GGTTTGAATCTGGCAGCATTGTTTGACAGGCGACAGGATTATGTTAAAAGGCAAACTCGT
TTTGTATCCCGCCAACCAGCACAAGTTATACTTTCAAATATTGAAGCTGTTGCAGAATCT
TTGTCTCTTAAAGTGCATACCCGCAATTATAAGACAAGACTGGAAGGAGTATCTGCAAAT
AAGACTGGACAATTTGCTGTTGTTCTGGAAGTTTTTGAAGTTGCACCATCCCTTTTCATG
GTTGATGTTCGGAAGGCTGCTGGAGATACTCTTGAATATCACAAGTTTTACAAGAATTTC
TGCGCTAAATTAGAAAATATCATCTGGAAACCGACAGAGGGCTCCAGTCTGCTTAGGACA
ATGAGTTGCTGATCCTGTAAGTGTAGGTGTGAAGCAAATCAGTCAGCAGACAGGCCAAAC
AAAATGCTCTCTCCTTAAATGAATGAGGCCATAAAATAAGCTGTTGGATAATATTATTGT
GTCTGCCTCATGCTTGCATTCATATGTAAATTGTGATATCCCCATCAGGCATGAAAAATT
GTATTTCTTTGTATAATGTAAATGGTCAAGGCCTCAGTGGAGACGTTCTTGTATTCATAG
GCTTTTTACGCTAAAAAATCACCGTCCATGTCTGAAATAGTGTTAAGAGTGTTACAGGAA
ATCCGGAATGTAGATGGTGTCATGCTTATATAGCAAAATGAAAATCTCTTAATAAAGTAA
CTGTTTGTCTCTTGTGTTATCC