Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g17460.1
CDS Infomation

gene=Cs4g17460
Sequence

ATGAGTTGGGCCGTCGCAGATGCCGTTGACTACAAGGGTTCACCTGCTGACCCGTCTAAA
ACTGGTGGGTGGGTTCCTGCTGCTCTTGTCCTAGGGATTGAATTATGCGAGAGGCTTTCA
ACAATGGGTATTGCAGTCAATCTTGTGACATACTTGGTGGGGACGATGCATCTACCAAGT
GCAACTTCGGCCAATATTGTGACTGATTTCATGGGCACATCTTTTCTTTTGTGTTTGCTT
GGAGGCTTTCTTGCTGATACATTCCTTGGCAGATACAAAACCATCGCCATATTTGCCGCA
GTACAGACACTCGGTACTGGCATGTTAGCGATGGTGACGAAGCTACGACAGCTACGTCCA
CGTCCATGCAAGGAAACTGCTACACATACGTGCGAGCAAGCCAGTGGATTTCAAATGGGA
GTTTTATACATAGCTTTATATCTAATTGCATTAGGAACTGGGGGCCTAAAGTCAAGCGTT
TCAGGATTCGGAACTGATCAATTTGATGAAAAAGATGAGAAGGAGAAAACCCAAATGGCG
TATTTTTTCAGCAGGTTCTTTTTCTTTATAAGCCTTGGGACTCTAATGGCGGTTACTGTG
CTTGTCTACATACAAGATGAAATTAGTCGAAGCGTGGGTTATGGAATTTGTTCAGTCGCC
ATGTTTATGGCCATCATAATATTCTTAGCTGGGACTAAAAGATATAGGTACAAGAAAAGC
TCCGGAAGCCCCATTGTTCACATTTTCCAAGTGATTGTAGCGGCAATAAAGAAGAGGAAG
ATGGATCTTCCTTGCAATGTTGGCATGTTGTATGAGGATACTCCTGAGGCCTCAAGGATT
CATCACACAGAACAATTTCATTTCTTGGACAAGGCTGCCATAGTTGCTGAAGGAGATTTT
GAGGCTGGTTCCACCCCAAACCCTTGGAAGCTATGCTCGGTGACAAGTGTGGAAGAAGTG
AAAATGGTGGCTAGACTCTTGCCAATTTGGGCCACTACCATTATCTTTTGGACCACTTAC
GCTCAGATGATCACCTTTTCAGTTGAGCAAGCAACCACCATGGAAAGATCAATTGGGAGA
TTCCAAATCCCAGCTGGCTCTCTCACTGTCTTCTTTGTTTCAGCTATATTGATCACCCTC
GCAGTATATGACCGTCTCATTATGCCACTTTGGAAGAAATGGAAAGGCAAACCAGGTTTT
ACGAACTTGCAGAGAATGGCCATAGGCCTAGTACTATCAATAGTGGGAATGGCAGCGGCA
GCACTAGTTGAGAGGAAACGGCTTTCAGTTGCAAGAGCTGTGGGACTCACCACAGCAACA
CTGCCCGTAAGTGTGTTCTTATTGATCCCACAATTCTTCTTGGTGGGTGCTGGTGAGGCT
TTTATATACACCGGTCAGCTCGATTTCTTCATAACTAAATCACCCAAAGGAATGAAGACT
ATGAGCACCGGTCTGTTCCTCACGACTCTGTCACTTGGGTTCTTCGTCAGCAGCTTCTTG
GTAGCAGTTGTGAAGAAGGTGACAGGAAGCAAGGGAGGTGGCGGATGGCTAGCTGACAAT
ATTAACCGTGGAAGGCTTGATCTTTTCTATGGTCTTTTGGCTATACTAAGTATCATCAAT
CTTGTAATATATCTTATTTGTGCCGTGTGGTACAAACCAAAGAAACCCAAAGCTGGTATA
CAGATGGAGACTTATGTTAAAGGGTCCTCTGCCGAGGAGAAGTGCTAG

Peptide Sequence

PEP ID

Cs4g17460.1
PEP Infomation
Sequence

MSWAVADAVDYKGSPADPSKTGGWVPAALVLGIELCERLSTMGIAVNLVTYLVGTMHLPS
ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRP
RPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA
YFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKS
SGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDF
EAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGR
FQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAA
ALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKT
MSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIIN
LVIYLICAVWYKPKKPKAGIQMETYVKGSSAEEKC*

Transcript Sequence

Transcript ID

Cs4g17460.1
Transcript Infomation

gene=Cs4g17460 CDS=88-1815
Sequence

ATCGTCCTTAGTTTGTTTAGTTTAGCTTTCATTTTCAGCATCTTCTGCTCTTTCCGCTTT
TGAAACTTTGAAAATTATGGAGGCAAGATGAGTTGGGCCGTCGCAGATGCCGTTGACTAC
AAGGGTTCACCTGCTGACCCGTCTAAAACTGGTGGGTGGGTTCCTGCTGCTCTTGTCCTA
GGGATTGAATTATGCGAGAGGCTTTCAACAATGGGTATTGCAGTCAATCTTGTGACATAC
TTGGTGGGGACGATGCATCTACCAAGTGCAACTTCGGCCAATATTGTGACTGATTTCATG
GGCACATCTTTTCTTTTGTGTTTGCTTGGAGGCTTTCTTGCTGATACATTCCTTGGCAGA
TACAAAACCATCGCCATATTTGCCGCAGTACAGACACTCGGTACTGGCATGTTAGCGATG
GTGACGAAGCTACGACAGCTACGTCCACGTCCATGCAAGGAAACTGCTACACATACGTGC
GAGCAAGCCAGTGGATTTCAAATGGGAGTTTTATACATAGCTTTATATCTAATTGCATTA
GGAACTGGGGGCCTAAAGTCAAGCGTTTCAGGATTCGGAACTGATCAATTTGATGAAAAA
GATGAGAAGGAGAAAACCCAAATGGCGTATTTTTTCAGCAGGTTCTTTTTCTTTATAAGC
CTTGGGACTCTAATGGCGGTTACTGTGCTTGTCTACATACAAGATGAAATTAGTCGAAGC
GTGGGTTATGGAATTTGTTCAGTCGCCATGTTTATGGCCATCATAATATTCTTAGCTGGG
ACTAAAAGATATAGGTACAAGAAAAGCTCCGGAAGCCCCATTGTTCACATTTTCCAAGTG
ATTGTAGCGGCAATAAAGAAGAGGAAGATGGATCTTCCTTGCAATGTTGGCATGTTGTAT
GAGGATACTCCTGAGGCCTCAAGGATTCATCACACAGAACAATTTCATTTCTTGGACAAG
GCTGCCATAGTTGCTGAAGGAGATTTTGAGGCTGGTTCCACCCCAAACCCTTGGAAGCTA
TGCTCGGTGACAAGTGTGGAAGAAGTGAAAATGGTGGCTAGACTCTTGCCAATTTGGGCC
ACTACCATTATCTTTTGGACCACTTACGCTCAGATGATCACCTTTTCAGTTGAGCAAGCA
ACCACCATGGAAAGATCAATTGGGAGATTCCAAATCCCAGCTGGCTCTCTCACTGTCTTC
TTTGTTTCAGCTATATTGATCACCCTCGCAGTATATGACCGTCTCATTATGCCACTTTGG
AAGAAATGGAAAGGCAAACCAGGTTTTACGAACTTGCAGAGAATGGCCATAGGCCTAGTA
CTATCAATAGTGGGAATGGCAGCGGCAGCACTAGTTGAGAGGAAACGGCTTTCAGTTGCA
AGAGCTGTGGGACTCACCACAGCAACACTGCCCGTAAGTGTGTTCTTATTGATCCCACAA
TTCTTCTTGGTGGGTGCTGGTGAGGCTTTTATATACACCGGTCAGCTCGATTTCTTCATA
ACTAAATCACCCAAAGGAATGAAGACTATGAGCACCGGTCTGTTCCTCACGACTCTGTCA
CTTGGGTTCTTCGTCAGCAGCTTCTTGGTAGCAGTTGTGAAGAAGGTGACAGGAAGCAAG
GGAGGTGGCGGATGGCTAGCTGACAATATTAACCGTGGAAGGCTTGATCTTTTCTATGGT
CTTTTGGCTATACTAAGTATCATCAATCTTGTAATATATCTTATTTGTGCCGTGTGGTAC
AAACCAAAGAAACCCAAAGCTGGTATACAGATGGAGACTTATGTTAAAGGGTCCTCTGCC
GAGGAGAAGTGCTAGCTAGTTTTTAAATTAAGTTATGGTTTTGATTTCTTTAATTAATGC
TGTTGCCTTTGTGAAATATGGGATGATTTGGATGTTTGATTGCTTATTTCCTGAATCTTA
ATCATCATTTAATCAAGTGACTTGTTGAGAATTCGATCGAG