Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g17400.1
CDS Infomation

gene=Cs4g17400
Sequence

ATGGAGGACAAGAAAGCTAATATAATTGCTGCTTCTCTAGTTCTTGCCCTCATCATCTTT
ATAATTATTGCTCGCGTCACACTCAAACTTTCCAAGGCCTTTTTCCTTATTGTAGGTGCT
GATATTGCAGTTGTCCTTGCTGTTTTCGCTTGTGTAATCATAAGAAGGCGTTACCATAAA
AGAAGATTGTTGTTAGAATCAAAGTTTGTAACAGAAGGCAGAGAGCTTCGGATTGAGTAT
AGTTTCCTAAGAAAAGTTGCTGGGGTACCGATAAAGTTTAGATCCAAAGAACTTGAAGAA
GCAACAGACAATTTTCAAGCACTGCTAGGCCATGGATCATCAGCTTCAGTTTTCAAAGGG
ATCCTAAGTGATGGAACTTCGGTTGCTGTCAAGCGGATTAACGGTGAGGAAAACGGGGAG
AAAGAATTCAGATCAGAAGTTGCAGCCATTGCTAGTGCGCAACATGTGAATCTTGTAAGG
TTGCTTGGATATTGTGTTGTCCCTGGAGGGCCTCGATACTTAGTCTATGAGTTCATTCAA
AATGGTTCATTGGATCATTGGATTTTTCCTACAAGCAGGAGAAGTGAAGGCCATTATTCT
GGTGGGTGTTTGTCATGGGATTTGAGGTATAGAGTTGCCATTGATGTGGCAAAGGCACTT
TCTTATCTTCATAATGATTGCCGGTCAAGGGTATTACACCTCGATGTCAAGCCTGAAAAT
ATACTTCTTGATGAGAATTATAGAGCAGTAGTATCGGATTTTGGTTTGTCGAAGTTAATG
AGTAGAGATCAAAGCAGATGTATCACAACAATCCGTGGGACTAGAGGTTACTTGGCTCCC
GAGTGGATACTGGAACAAGGGGTCTCTGAGAAATGTGATATCTATAGTTATGGTATGGTT
CTTTTGGAGCTGACTGGGGGAAGAAGAAATGTAAGCTTGATTGAACACGGGAATGATAAG
TCTAAAAATAAGTGGCAGTACTTTCCGAAAATTGTGAATGAGAAAATGAAAGAAGGGAAG
CTAATGGAAATTGTGGATCAAAGACTAACTGATGAGGGAGGAATTGATGAAACTCAGGTA
AGGAGATTAGTTGATGTAGCATTTTGGTGCATACAAGAGAGGGCTAGGCTTAGGCCTAGC
ATGGCCCGAGTGGTTGAAATGCTTGAAGGCCGCGTGGCAGTGGATGATCCGCCAGATACC
CAAATGGTCATTGTTGATTGGTTGTCGATTGATCAAGATGATGATGCAGGTGGTGACATT
GGAAGGAGGAGACTTGCAGCATTGGCATCAGACTTAGGTAGAAATCTTGCCACTGATTCA
GCAGCGTGCTCACTTACCATGTCAGTTCTCTCCGGAAGGTAG

Peptide Sequence

PEP ID

Cs4g17400.1
PEP Infomation
Sequence

MEDKKANIIAASLVLALIIFIIIARVTLKLSKAFFLIVGADIAVVLAVFACVIIRRRYHK
RRLLLESKFVTEGRELRIEYSFLRKVAGVPIKFRSKELEEATDNFQALLGHGSSASVFKG
ILSDGTSVAVKRINGEENGEKEFRSEVAAIASAQHVNLVRLLGYCVVPGGPRYLVYEFIQ
NGSLDHWIFPTSRRSEGHYSGGCLSWDLRYRVAIDVAKALSYLHNDCRSRVLHLDVKPEN
ILLDENYRAVVSDFGLSKLMSRDQSRCITTIRGTRGYLAPEWILEQGVSEKCDIYSYGMV
LLELTGGRRNVSLIEHGNDKSKNKWQYFPKIVNEKMKEGKLMEIVDQRLTDEGGIDETQV
RRLVDVAFWCIQERARLRPSMARVVEMLEGRVAVDDPPDTQMVIVDWLSIDQDDDAGGDI
GRRRLAALASDLGRNLATDSAACSLTMSVLSGR*

Transcript Sequence

Transcript ID

Cs4g17400.1
Transcript Infomation

gene=Cs4g17400 CDS=273-1634
Sequence

GAGAACTTCTTGGTTGTTTCTTTTTATCCCACATGCATAATTTAAAAATTCAAAGAGTAA
CCCAATTCTATTCAACATTTGGCTCCTCTACCAATGATATCAAATATGATCTTCCAAGTT
CAATATTCTCATACTCTATCTTTCTAGGAAACTATTCACAGTCAAACATTGGTTGCTCTT
TTCACAGTACATAGAATATGAAAACCTCAAAAGCTTCAAAAACTAAACTCTTTAGCCTCA
CAATTTAGATTGGTACAAGAATGAAGCTCTAGATGGAGGACAAGAAAGCTAATATAATTG
CTGCTTCTCTAGTTCTTGCCCTCATCATCTTTATAATTATTGCTCGCGTCACACTCAAAC
TTTCCAAGGCCTTTTTCCTTATTGTAGGTGCTGATATTGCAGTTGTCCTTGCTGTTTTCG
CTTGTGTAATCATAAGAAGGCGTTACCATAAAAGAAGATTGTTGTTAGAATCAAAGTTTG
TAACAGAAGGCAGAGAGCTTCGGATTGAGTATAGTTTCCTAAGAAAAGTTGCTGGGGTAC
CGATAAAGTTTAGATCCAAAGAACTTGAAGAAGCAACAGACAATTTTCAAGCACTGCTAG
GCCATGGATCATCAGCTTCAGTTTTCAAAGGGATCCTAAGTGATGGAACTTCGGTTGCTG
TCAAGCGGATTAACGGTGAGGAAAACGGGGAGAAAGAATTCAGATCAGAAGTTGCAGCCA
TTGCTAGTGCGCAACATGTGAATCTTGTAAGGTTGCTTGGATATTGTGTTGTCCCTGGAG
GGCCTCGATACTTAGTCTATGAGTTCATTCAAAATGGTTCATTGGATCATTGGATTTTTC
CTACAAGCAGGAGAAGTGAAGGCCATTATTCTGGTGGGTGTTTGTCATGGGATTTGAGGT
ATAGAGTTGCCATTGATGTGGCAAAGGCACTTTCTTATCTTCATAATGATTGCCGGTCAA
GGGTATTACACCTCGATGTCAAGCCTGAAAATATACTTCTTGATGAGAATTATAGAGCAG
TAGTATCGGATTTTGGTTTGTCGAAGTTAATGAGTAGAGATCAAAGCAGATGTATCACAA
CAATCCGTGGGACTAGAGGTTACTTGGCTCCCGAGTGGATACTGGAACAAGGGGTCTCTG
AGAAATGTGATATCTATAGTTATGGTATGGTTCTTTTGGAGCTGACTGGGGGAAGAAGAA
ATGTAAGCTTGATTGAACACGGGAATGATAAGTCTAAAAATAAGTGGCAGTACTTTCCGA
AAATTGTGAATGAGAAAATGAAAGAAGGGAAGCTAATGGAAATTGTGGATCAAAGACTAA
CTGATGAGGGAGGAATTGATGAAACTCAGGTAAGGAGATTAGTTGATGTAGCATTTTGGT
GCATACAAGAGAGGGCTAGGCTTAGGCCTAGCATGGCCCGAGTGGTTGAAATGCTTGAAG
GCCGCGTGGCAGTGGATGATCCGCCAGATACCCAAATGGTCATTGTTGATTGGTTGTCGA
TTGATCAAGATGATGATGCAGGTGGTGACATTGGAAGGAGGAGACTTGCAGCATTGGCAT
CAGACTTAGGTAGAAATCTTGCCACTGATTCAGCAGCGTGCTCACTTACCATGTCAGTTC
TCTCCGGAAGGTAGTCTTTAAGAAAGTATAAACTTGACAGTCTTTTTTGTGCAAGTTTAA
GCACATATAGGAAAAAGAACTGTAATGATAATCCTTCATGTTATTAAAAAGCTAACCAGC
TTTCTTGCTTTTTAATGGATACATACTCTGTACCAAATTGGTAAGGGTTCCCAGTT