Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g17290.1
CDS Infomation

gene=Cs4g17290
Sequence

ATGGCCGCTGTAGGAATCGAAACGAAGCAGCCGGAATCGGCGGCGCCAGAGGAGGTGTGT
GCGGCGAAAGGAGCATCGAAACAAGGAGAGGGATTGAGGCAATACTACCTCCAACACATT
CACGAACTCCAGCTCCAAGTCCGTCAAAAAACCCACAATCTCAATCGCCTCGAAGCCCAG
CGTAACGAACTCAATTCTAGAGTGCGGATGCTTAAAGAAGAATTACAGCTTCTTCAAGAG
CCTGGATCCTATGTCGGTGAAGTTGTTAAAGTTATGGGAAAAAATAAGGTTCTTGTTAAG
GTTCATCCTGAGGGGAAATATGTTGTTGATATTGATAAAAGTATTGATATAACCAAGATC
ACTCCGTCAACAAGAGTTGCACTTCGTAATGACAGCTATGTTCTTCATTTGATCCTGCCA
AGCAAAGTAGATCCCCTGGTCAACCTTATGAAGGTTGAAAAGGTCCCTGATTCTACATAT
GACATGATTGGTGGCCTTGATCAGCAAATTAAGGAGATCAAGGAGGTCATTGAGCTTCCT
ATCAAACATCCCGAATTGTTCGAGTCTCTTGGAATAGCTCAACCCAAGGGTGTATTGCTA
TATGGACCACCTGGTACTGGCAAAACACTGTTGGCTAGAGCTGTGGCTCATCATACTGAT
TGTACTTTCATCAGGGTTTCTGGTTCTGAATTAGTCCAGAAATACATTGGAGAAGGCTCC
AGAATGGTTAGAGAACTTTTTGTTATGGCAAGGGAACATGCTCCGTCTATCATTTTTATG
GATGAAATTGACAGTATCGGATCTGCCCGAATGGAATCTGGCAGCGGAAATGGTGACAGT
GAGGTGCAGAGGACTATGCTGGAGCTGCTCAACCAGCTTGATGGATTTGAAGCATCAAAC
AAAATTAAGGTTCTCATGGCGACAAATCGAATTGATATTCTCGATCAAGCTCTTCTCAGG
CCAGGACGAATTGACAGAAAGATTGAATTTCCAAATCCTAATGAAGAGTCTCGTCTTGAT
ATCCTAAAAATTCATTCAAGAAGAATGAATTTAATGCGTGGCATTGATTTGAAGAAGATT
GCCGAGAAGATGAATGGTGCATCTGGTGCGGAGCTTAAGGCTGTGTGCACAGAAGCCGGT
ATGTTTGCTCTAAGAGAGAGAAGGATCCATGTAACACAGGAAGATTTTGAGATGGCAGTG
GCCAAGGTCATGAAGAAAGAAACAGAGAAGAACATGTCCTTGCGGAAGTTGTGGAAGTAA

Peptide Sequence

PEP ID

Cs4g17290.1
PEP Infomation
Sequence

MAAVGIETKQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ
RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI
TPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS
RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN
KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI
AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK*

Transcript Sequence

Transcript ID

Cs4g17290.1
Transcript Infomation

gene=Cs4g17290 CDS=208-1467
Sequence

AAAATATTTGTTTTTTGGGGAAAAGAAATAAAAATTTCTCAAAAGCTAAACTAAAATAAA
ATCTGACTTGAACTGAAAGAAACTATAATGTATATATATAACGCGCTGCGGTCACATTAC
AGCGACTAAAAACAAACCAAACCCGAACGAGACTTGATCCGAAAGACAATTAGATTCGAA
CAAATCGAACTCGTTCACTCGGAAAGAATGGCCGCTGTAGGAATCGAAACGAAGCAGCCG
GAATCGGCGGCGCCAGAGGAGGTGTGTGCGGCGAAAGGAGCATCGAAACAAGGAGAGGGA
TTGAGGCAATACTACCTCCAACACATTCACGAACTCCAGCTCCAAGTCCGTCAAAAAACC
CACAATCTCAATCGCCTCGAAGCCCAGCGTAACGAACTCAATTCTAGAGTGCGGATGCTT
AAAGAAGAATTACAGCTTCTTCAAGAGCCTGGATCCTATGTCGGTGAAGTTGTTAAAGTT
ATGGGAAAAAATAAGGTTCTTGTTAAGGTTCATCCTGAGGGGAAATATGTTGTTGATATT
GATAAAAGTATTGATATAACCAAGATCACTCCGTCAACAAGAGTTGCACTTCGTAATGAC
AGCTATGTTCTTCATTTGATCCTGCCAAGCAAAGTAGATCCCCTGGTCAACCTTATGAAG
GTTGAAAAGGTCCCTGATTCTACATATGACATGATTGGTGGCCTTGATCAGCAAATTAAG
GAGATCAAGGAGGTCATTGAGCTTCCTATCAAACATCCCGAATTGTTCGAGTCTCTTGGA
ATAGCTCAACCCAAGGGTGTATTGCTATATGGACCACCTGGTACTGGCAAAACACTGTTG
GCTAGAGCTGTGGCTCATCATACTGATTGTACTTTCATCAGGGTTTCTGGTTCTGAATTA
GTCCAGAAATACATTGGAGAAGGCTCCAGAATGGTTAGAGAACTTTTTGTTATGGCAAGG
GAACATGCTCCGTCTATCATTTTTATGGATGAAATTGACAGTATCGGATCTGCCCGAATG
GAATCTGGCAGCGGAAATGGTGACAGTGAGGTGCAGAGGACTATGCTGGAGCTGCTCAAC
CAGCTTGATGGATTTGAAGCATCAAACAAAATTAAGGTTCTCATGGCGACAAATCGAATT
GATATTCTCGATCAAGCTCTTCTCAGGCCAGGACGAATTGACAGAAAGATTGAATTTCCA
AATCCTAATGAAGAGTCTCGTCTTGATATCCTAAAAATTCATTCAAGAAGAATGAATTTA
ATGCGTGGCATTGATTTGAAGAAGATTGCCGAGAAGATGAATGGTGCATCTGGTGCGGAG
CTTAAGGCTGTGTGCACAGAAGCCGGTATGTTTGCTCTAAGAGAGAGAAGGATCCATGTA
ACACAGGAAGATTTTGAGATGGCAGTGGCCAAGGTCATGAAGAAAGAAACAGAGAAGAAC
ATGTCCTTGCGGAAGTTGTGGAAGTAATCATTTCCATGTGCTGTGCTGTGTATTTGCTTA
TTTTCTGAGCAAGATTCAAGTAGTCCTTAACGGCACTCACTCGTGTTCTGGGACATTTGC
ACGATAGGCCCTTTTAGCCTGACTGTTGTCTTTTCTTGCGCTCTAGCCTCTTATGATAAA
CAAATTTGCAATCTATTTTATCTAAATTTAAATTCGCATGCAATTCTGGAAACCTCAGTA
CCTCACTAATAATGGAAAAGCCCGTCTGTGTCTTGTAAGCAGCGGTACTATCATCGGTTT
CCTAAGATTGTGTCCTTCAAAGAAAGAAAGGCTAAGCCTGCTACGCGGTTGGGTAGAATT
GTACTGATGATTATAAGTAGAATCAATCTAGAATATTATTGCCTTGCAACAAACGCTGAT
CCATAATTTCATATTTTGGATGTTTGTCAACAATGAAACTTCTGCATCGTGGCTCACGTC
ACAGCTCGCATGTGTCAATGCGTCTGTCCGCTCCTTGCGTATGATAAAGTTTAGGTGATG
TTGTTAGT