Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g17260.1
CDS Infomation

gene=Cs4g17260
Sequence

ATGACTGAGCCAAAACCAAATACGCCCTTGATCCCACCAACATCACCATCACGAAATCTC
CCTGATTTCAAGAAGTCAGTTAAGCTAAAATATGTGAAACTTGGATATCATTACCTAATC
ACTCATGGAATGTTCCTCTTCCTTTCACCTCTTGTAGTCATAGTTGCCGCGCAGCTTTCA
ACGTTTTCTTTTCAGGACCTTTATGATCTTTGGGAGCATCTCCAGTACAATCTTATTTCT
GTTATCATATGCTCAACTTTGCTTGTTTTCCTCTTGACACTTTACTTTCTCACTCGCCCC
CGGCCTGTTTACCTCGTAGACTTTTCCTGCTACAAGCCTGAAGAATCTCGGAAATGTACT
AAAAGGATTTTTATGGATCAGTCCCGGATGACTGGTACATTTACAGAGGAAAATCTTCAG
TTTCAGAAGAAGATCCTAGAGCGATCTGGACTTGGTGATTCAACTTACCTTCCAGAGGCT
GTGCTCAACATTCCTCCAAACCCATCAATGAAAGAAGCTAGAAAAGAAGCTGAGGCTGTG
ATGTTTGGTGCCATTGATGAGCTTTTTGCAAAAACCTCTGTGAAACCCAAGGACATTGGT
ATCTTGATTGTGAATTGTAGCTTGTTCAATCCAACGCCATCTCTGTCTGCCATGGTCATC
AACCATTACAAGCTTCGAGGGAATATAATTAGCTACAATTTGGGAGGGATGGGCTGCAGT
GCAGGTTTGATTTCAATTGATCTTGCAAACAATCTTCTTCAGGTTCATCCCAACTCTTAT
GCATTGGTTATTAGCATGGAGAACATCACATTGAATTGGTACTTTGGAAATGATCGGTCA
AAGCTTGTTTCAAATTGCTTATTCCGGATGGGAGGGGCTGCAATATTGCTTTCAAACAGA
TTCTCTGACAGAAGAAGATCGAAATACAGATTGGTGCACACTGTCCGTACGCACAAGGGT
GCTGATGATAACTGCTTTGCCTGTGTTACTCAAGAAGAAGACTCTGAAGGGAAAGTTGGT
GTTACTTTGTCAAAAAATCTGATGGCTGTCGCAGGGGATGCCTTAAAGACCAATATCACC
ACACTGGGGCCTCTTGTTCTGCCAATGTCTGAGCAGCTGCTCTTCTTTGCTACATTAGTT
GGGAAGAAACTATTCAAGATGAAGATCAAGCCTTACATCCCAGATTTCAAACTGGCTTTT
GAGCATTTCTGCATTCATGCTGGAGGGAGAGCTGTTTTGGATGAATTGGAGAAGAACTTG
CAGCTGTCTGATTGGCACATGGAACCATCAAGGATGACACTTTATCGTTTTGGCAACACA
TCAAGCAGTTCACTTTGGTATGAATTGGCTTATTCAGAAGCCAAGGGCAGGATAAAGAAA
GGTGATAGAACATGGCAAATAGCATTTGGTTCTGGGTTCAAGTGTAACAGTGCAGTGTGG
AAGGCTTTAAGGTCAATAAACTCGGCAAAGGAGAAGAACCCATGGATGGACGAGATCCAC
CATTTCCCTGTAGATGTTCCTAAGGTTTCAACCATATAA

Peptide Sequence

PEP ID

Cs4g17260.1
PEP Infomation
Sequence

MTEPKPNTPLIPPTSPSRNLPDFKKSVKLKYVKLGYHYLITHGMFLFLSPLVVIVAAQLS
TFSFQDLYDLWEHLQYNLISVIICSTLLVFLLTLYFLTRPRPVYLVDFSCYKPEESRKCT
KRIFMDQSRMTGTFTEENLQFQKKILERSGLGDSTYLPEAVLNIPPNPSMKEARKEAEAV
MFGAIDELFAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIISYNLGGMGCS
AGLISIDLANNLLQVHPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILLSNR
FSDRRRSKYRLVHTVRTHKGADDNCFACVTQEEDSEGKVGVTLSKNLMAVAGDALKTNIT
TLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL
QLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVW
KALRSINSAKEKNPWMDEIHHFPVDVPKVSTI*

Transcript Sequence

Transcript ID

Cs4g17260.1
Transcript Infomation

gene=Cs4g17260 CDS=508-2046
Sequence

TGCAACGCAGGGACTTGAATGGATGCATTCTAAACTTTCCGAGTGTATGCATGTGCCACT
GAGGTCTTAAAGTTGTTTTCTAACTGGCAAGCGGCAGCCGGAATGAAAGTGGCAAGTGTT
GAAGCCCCAAGTCAGGAGAGCCGTTGGATGATAATCAGACAAAAAGACTTGACAAGGCTC
GTTAACCTCAAAGTCAAAACATTCAATTCAAAACAATCCAGCGCCTGCGCCGCCCATTTT
AACTTAATTAATGTGTTGTATGTGTTATGCTTTATAAGCTTCCTTAACGCGTATTTGTAG
CCAGTTTCCTCGATGGTTTCCATTATCTTCTCTCTTTAGTATAAATTTTATTCCCGTTTC
TCCTCACGTTCAAATTTTTCATTCTAACTATAGCTTTTGCCATTTTTTGTTTGTCCTAAG
CAGCGAATTCTTTTTTTTTTTTTTTCTCGTTGGTTTCTCTGTCGAGATTCAAGCGATCCG
CCGGTGGGTTTTGACAATCAAGGGAAAATGACTGAGCCAAAACCAAATACGCCCTTGATC
CCACCAACATCACCATCACGAAATCTCCCTGATTTCAAGAAGTCAGTTAAGCTAAAATAT
GTGAAACTTGGATATCATTACCTAATCACTCATGGAATGTTCCTCTTCCTTTCACCTCTT
GTAGTCATAGTTGCCGCGCAGCTTTCAACGTTTTCTTTTCAGGACCTTTATGATCTTTGG
GAGCATCTCCAGTACAATCTTATTTCTGTTATCATATGCTCAACTTTGCTTGTTTTCCTC
TTGACACTTTACTTTCTCACTCGCCCCCGGCCTGTTTACCTCGTAGACTTTTCCTGCTAC
AAGCCTGAAGAATCTCGGAAATGTACTAAAAGGATTTTTATGGATCAGTCCCGGATGACT
GGTACATTTACAGAGGAAAATCTTCAGTTTCAGAAGAAGATCCTAGAGCGATCTGGACTT
GGTGATTCAACTTACCTTCCAGAGGCTGTGCTCAACATTCCTCCAAACCCATCAATGAAA
GAAGCTAGAAAAGAAGCTGAGGCTGTGATGTTTGGTGCCATTGATGAGCTTTTTGCAAAA
ACCTCTGTGAAACCCAAGGACATTGGTATCTTGATTGTGAATTGTAGCTTGTTCAATCCA
ACGCCATCTCTGTCTGCCATGGTCATCAACCATTACAAGCTTCGAGGGAATATAATTAGC
TACAATTTGGGAGGGATGGGCTGCAGTGCAGGTTTGATTTCAATTGATCTTGCAAACAAT
CTTCTTCAGGTTCATCCCAACTCTTATGCATTGGTTATTAGCATGGAGAACATCACATTG
AATTGGTACTTTGGAAATGATCGGTCAAAGCTTGTTTCAAATTGCTTATTCCGGATGGGA
GGGGCTGCAATATTGCTTTCAAACAGATTCTCTGACAGAAGAAGATCGAAATACAGATTG
GTGCACACTGTCCGTACGCACAAGGGTGCTGATGATAACTGCTTTGCCTGTGTTACTCAA
GAAGAAGACTCTGAAGGGAAAGTTGGTGTTACTTTGTCAAAAAATCTGATGGCTGTCGCA
GGGGATGCCTTAAAGACCAATATCACCACACTGGGGCCTCTTGTTCTGCCAATGTCTGAG
CAGCTGCTCTTCTTTGCTACATTAGTTGGGAAGAAACTATTCAAGATGAAGATCAAGCCT
TACATCCCAGATTTCAAACTGGCTTTTGAGCATTTCTGCATTCATGCTGGAGGGAGAGCT
GTTTTGGATGAATTGGAGAAGAACTTGCAGCTGTCTGATTGGCACATGGAACCATCAAGG
ATGACACTTTATCGTTTTGGCAACACATCAAGCAGTTCACTTTGGTATGAATTGGCTTAT
TCAGAAGCCAAGGGCAGGATAAAGAAAGGTGATAGAACATGGCAAATAGCATTTGGTTCT
GGGTTCAAGTGTAACAGTGCAGTGTGGAAGGCTTTAAGGTCAATAAACTCGGCAAAGGAG
AAGAACCCATGGATGGACGAGATCCACCATTTCCCTGTAGATGTTCCTAAGGTTTCAACC
ATATAATTCCCGGACTGGGTTGCTGGTTGTTTGATTGGATATATTTTGCACTTCTTTCTA
ATTAGGCTGTTGAAATTCATTGGTGCTTACATGTCAGGACAAGAGTAGTTTCTTGATTGA
TTGCTGGCTGTTTTGCATGTAATTGTTGTAGGGTTAAGTTTTGTGATATTGGTGGAGTCG
TGATTCAATTCATTTTGACTAATTTGATTCACGGTATATTTCTGGTGGGAAAGAAGATAT
TGGAGCATTTCCAATTGCGATCTGTTTTATAAGAGATTAATCTATTG