Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g17120.1
CDS Infomation

gene=Cs4g17120
Sequence

ATGTCGCAAAACAACTGGGAAGCTGATAAAATGTTGGATGTGTATATATATGATTACCTT
TTGAAGAGAAAATTGCATGCTTCTGCCAAGGCGTTTCAAACTGAAGGGAAAGTATCTACT
GATCCAGTAGCTATAGATGCGCCCGGTGGTTTTTTATTCGAATGGTGGTCTGTGTTCTGG
GATATATTTATCGCAAGGACAAATGAGAAGCACTCTGAGTCTGCAGCATCCTACATTGAG
AGTCAGGTGATTAAGGCTCGGGAACAGCAGCAACAACAGCAGCAACAGCATCAAAAGCCT
CAGCAGCATCAGCAGATGCAGGTTCAGCAGCTCTTACTGCAGAGGCATGCTCAGCAGCAG
CAACAGCAGCAGAGAAGAGACAGTACTCAGCATCTAAATGACACTGGTGATGATCTGAGA
CCTGGCTTTGCAAAAGCCTTCACAACAAAAATGTATGAGGATCGATTAAAAAAGCTTCCG
TTTCAGAGGGATTCCTTGGATGATGCTACCATTAAGCCAAGATTAAGTGACAATATGACC
CAGCTTTTGGATCCCAATCATGCCACTTTGTTGAAAGCAGCTGCAATAGGCAGCCAGCCT
TCAGGGCAAACGCTGCATGGTACACATGGAGTTAGTCAGCAAGTTCAAAGTCGGAGTCAG
CAACCTCCACTGTCAACACAAGAAGTGAAAACTGAGATGAACCCTACGATGAATCCTAGA
GCAGCAGGTTCAGAGGGATCATTGATTGGAGTTCATGGGTCAAATCAAGGTGCTGGCAAT
GTGACTCTGAAAGGCTGGCCTTTGACTGGACTGGATCAGTTTCGATCTGGGCTTTTGCAA
CAACAGAAATCTTTGACTCAGCCCTACAATCAACTTCAGTTGCAACAACTTATGCTTCAG
GCACAGCAGAATTTGGCGTCTCCGTCCGCCAATGATTTGGAATCCAGAAAACTGAGGATG
CTTCATAACAGTCGTAATATGGGTCTTGCAAGGGATGGCTCATCAAATTCTGTTGGTGAT
CTTGTGTCTACTGTTGGATCAGCTATGCAAATTATTTCCCCTGGTTTGCCTCGTGGAGAT
AATGATCTGCTAATAAAGATACAGCAGCAGCAGCAGCAGCTGCAGCACTATTCCCACCAT
CCACTTTCAAGCCAGCAGTCTCAAAATTCAAATCCTCTCCTCCAGCAGCAAGATAAAATT
CTTGCCGGTGGCAGCATGACCATGGATGGTAGCATGTCTAACACTTTTCAAGGAAATGAT
CAGGCATCAAAAAATCAAATTGGGCGAAAGAGAAAGCAGGCAGTGTCATCTTCTGGTCCT
GCTAATAGCTCAGGAACTGCAAACACTCCTGGACCAACCCCAAGTTCTCCCTCATCACCT
TCTACTCACACACCAGGAGACGTAATCTCAAGGCCAACTTTGCAGCATAATGGTGCCTCC
TCTAAATCTCTGCTGATGTTTGGTTCTGATGGTATGGGATCACTTACGTCAGCACCAAAT
CAGTTGACTGACATGGACCGCTTTGTTGATGATGGATCCCTGGATGATAATGTAGAATCA
TTCTTATCACCTGATGATGCAGATCCTAGAGATCGGGTTGGTAGGAGCGCAGAAGTCGGC
AAAGGCTTCACATTTACGGAATTTCAGCTTATTCCTGCAAGTACAAGTAAAGTTGAAAGT
TGTCACTTCTCGCCAGATGGAAAACTTCTTGCCACTGGTGGACATGATAAAAAGGCTGTG
TTATGGTGCACGGAGTCTTTTACGGTAAAGTCTACACTTGAGGAACATACTCAATGGATA
ACTGATGTCCGTTTCAGTCCAAGCCTATCAAGGCTGGCTACATCTTCAGCTGATAGAACT
GTCAGGGTTTGGGATACTGAAAATCCTGACTATTCACTTCGTACTTTTACGGGTCATTCT
ACAACTGTTATGTCTTTGGATTTCCATCCTAGTAAAGAAGACCTTCTCTGTTCTTGTGAT
AATAATAGTGAGATACGATACTGGAGTATCAACAATGGTAGCTGTGCTGGAGTTTTCAAG
TGTCAGAGTGGTGCAACCCAGATGAGATTTCAACCTCGTCTTGGAAGGATTCTTGCTGCA
GCCATAGAGAACTATATCTCTATACTTGATGTAGAGACCCAAGTTTGCAGACTTAAATTA
CAGGGTCATAAAAATCAAGTTCATTCTGTGTGCTGGAACACTTCGGGTGAGTATCTGGCA
TCAGTGAGTGACGAATTAGTCAGGGTGTGGAGCATTGGTTCTGGCAGCAAAGGGGAATGC
ATTCATGAGTTAAGCTGTACTGGCAACAAATTCCATAGCTGTGTTTTCCATCCCACATTC
CCCTCACTATTGGTTATCGGCTGTTATGAGACTTTGGAGCTCTGGAACATGACTGAAAAC
AAGACACTGACTCTGAGTGCACACGACAAGCTTGTATCATCTTTGGCAGCATCAACTGTT
AACGGTATGGTAGCTTCAGCTAGTCATGACAAGTGCGTCAAGATCTGGAAGTGA

Peptide Sequence

PEP ID

Cs4g17120.1
PEP Infomation
Sequence

MSQNNWEADKMLDVYIYDYLLKRKLHASAKAFQTEGKVSTDPVAIDAPGGFLFEWWSVFW
DIFIARTNEKHSESAASYIESQVIKAREQQQQQQQQHQKPQQHQQMQVQQLLLQRHAQQQ
QQQQRRDSTQHLNDTGDDLRPGFAKAFTTKMYEDRLKKLPFQRDSLDDATIKPRLSDNMT
QLLDPNHATLLKAAAIGSQPSGQTLHGTHGVSQQVQSRSQQPPLSTQEVKTEMNPTMNPR
AAGSEGSLIGVHGSNQGAGNVTLKGWPLTGLDQFRSGLLQQQKSLTQPYNQLQLQQLMLQ
AQQNLASPSANDLESRKLRMLHNSRNMGLARDGSSNSVGDLVSTVGSAMQIISPGLPRGD
NDLLIKIQQQQQQLQHYSHHPLSSQQSQNSNPLLQQQDKILAGGSMTMDGSMSNTFQGND
QASKNQIGRKRKQAVSSSGPANSSGTANTPGPTPSSPSSPSTHTPGDVISRPTLQHNGAS
SKSLLMFGSDGMGSLTSAPNQLTDMDRFVDDGSLDDNVESFLSPDDADPRDRVGRSAEVG
KGFTFTEFQLIPASTSKVESCHFSPDGKLLATGGHDKKAVLWCTESFTVKSTLEEHTQWI
TDVRFSPSLSRLATSSADRTVRVWDTENPDYSLRTFTGHSTTVMSLDFHPSKEDLLCSCD
NNSEIRYWSINNGSCAGVFKCQSGATQMRFQPRLGRILAAAIENYISILDVETQVCRLKL
QGHKNQVHSVCWNTSGEYLASVSDELVRVWSIGSGSKGECIHELSCTGNKFHSCVFHPTF
PSLLVIGCYETLELWNMTENKTLTLSAHDKLVSSLAASTVNGMVASASHDKCVKIWK*

Transcript Sequence

Transcript ID

Cs4g17120.1
Transcript Infomation

gene=Cs4g17120 CDS=337-2850
Sequence

AAGCTGACAAAAAAGCAGAGCTCAAAGCAAAACAAATTTGCAGCTCTGGGCCTCTGGTTG
CGTGAGCTCTTGCACTACGGAGAAGAAAATTGAAAAAACTATTTTTTATAAAAGGAAGAG
AAGCCACTGGAAAAATTAATATTAAACACATGCCATTGTTTCAAGCGGAAGTTCTTTAAA
AAAAAAAAAAAAAAGAGCAAGAATGTTTTATTCTTATTGTTAAAGCCGTAGAGCATGTTT
TAAGATTCTAACTGAAGAAGAATTTTCAGCCGACATTCTCAACACTCACAGCTTTAAACA
TTTTCTCTCTGTCTTTCTTAAGCTCGTACAAGAATCATGTCGCAAAACAACTGGGAAGCT
GATAAAATGTTGGATGTGTATATATATGATTACCTTTTGAAGAGAAAATTGCATGCTTCT
GCCAAGGCGTTTCAAACTGAAGGGAAAGTATCTACTGATCCAGTAGCTATAGATGCGCCC
GGTGGTTTTTTATTCGAATGGTGGTCTGTGTTCTGGGATATATTTATCGCAAGGACAAAT
GAGAAGCACTCTGAGTCTGCAGCATCCTACATTGAGAGTCAGGTGATTAAGGCTCGGGAA
CAGCAGCAACAACAGCAGCAACAGCATCAAAAGCCTCAGCAGCATCAGCAGATGCAGGTT
CAGCAGCTCTTACTGCAGAGGCATGCTCAGCAGCAGCAACAGCAGCAGAGAAGAGACAGT
ACTCAGCATCTAAATGACACTGGTGATGATCTGAGACCTGGCTTTGCAAAAGCCTTCACA
ACAAAAATGTATGAGGATCGATTAAAAAAGCTTCCGTTTCAGAGGGATTCCTTGGATGAT
GCTACCATTAAGCCAAGATTAAGTGACAATATGACCCAGCTTTTGGATCCCAATCATGCC
ACTTTGTTGAAAGCAGCTGCAATAGGCAGCCAGCCTTCAGGGCAAACGCTGCATGGTACA
CATGGAGTTAGTCAGCAAGTTCAAAGTCGGAGTCAGCAACCTCCACTGTCAACACAAGAA
GTGAAAACTGAGATGAACCCTACGATGAATCCTAGAGCAGCAGGTTCAGAGGGATCATTG
ATTGGAGTTCATGGGTCAAATCAAGGTGCTGGCAATGTGACTCTGAAAGGCTGGCCTTTG
ACTGGACTGGATCAGTTTCGATCTGGGCTTTTGCAACAACAGAAATCTTTGACTCAGCCC
TACAATCAACTTCAGTTGCAACAACTTATGCTTCAGGCACAGCAGAATTTGGCGTCTCCG
TCCGCCAATGATTTGGAATCCAGAAAACTGAGGATGCTTCATAACAGTCGTAATATGGGT
CTTGCAAGGGATGGCTCATCAAATTCTGTTGGTGATCTTGTGTCTACTGTTGGATCAGCT
ATGCAAATTATTTCCCCTGGTTTGCCTCGTGGAGATAATGATCTGCTAATAAAGATACAG
CAGCAGCAGCAGCAGCTGCAGCACTATTCCCACCATCCACTTTCAAGCCAGCAGTCTCAA
AATTCAAATCCTCTCCTCCAGCAGCAAGATAAAATTCTTGCCGGTGGCAGCATGACCATG
GATGGTAGCATGTCTAACACTTTTCAAGGAAATGATCAGGCATCAAAAAATCAAATTGGG
CGAAAGAGAAAGCAGGCAGTGTCATCTTCTGGTCCTGCTAATAGCTCAGGAACTGCAAAC
ACTCCTGGACCAACCCCAAGTTCTCCCTCATCACCTTCTACTCACACACCAGGAGACGTA
ATCTCAAGGCCAACTTTGCAGCATAATGGTGCCTCCTCTAAATCTCTGCTGATGTTTGGT
TCTGATGGTATGGGATCACTTACGTCAGCACCAAATCAGTTGACTGACATGGACCGCTTT
GTTGATGATGGATCCCTGGATGATAATGTAGAATCATTCTTATCACCTGATGATGCAGAT
CCTAGAGATCGGGTTGGTAGGAGCGCAGAAGTCGGCAAAGGCTTCACATTTACGGAATTT
CAGCTTATTCCTGCAAGTACAAGTAAAGTTGAAAGTTGTCACTTCTCGCCAGATGGAAAA
CTTCTTGCCACTGGTGGACATGATAAAAAGGCTGTGTTATGGTGCACGGAGTCTTTTACG
GTAAAGTCTACACTTGAGGAACATACTCAATGGATAACTGATGTCCGTTTCAGTCCAAGC
CTATCAAGGCTGGCTACATCTTCAGCTGATAGAACTGTCAGGGTTTGGGATACTGAAAAT
CCTGACTATTCACTTCGTACTTTTACGGGTCATTCTACAACTGTTATGTCTTTGGATTTC
CATCCTAGTAAAGAAGACCTTCTCTGTTCTTGTGATAATAATAGTGAGATACGATACTGG
AGTATCAACAATGGTAGCTGTGCTGGAGTTTTCAAGTGTCAGAGTGGTGCAACCCAGATG
AGATTTCAACCTCGTCTTGGAAGGATTCTTGCTGCAGCCATAGAGAACTATATCTCTATA
CTTGATGTAGAGACCCAAGTTTGCAGACTTAAATTACAGGGTCATAAAAATCAAGTTCAT
TCTGTGTGCTGGAACACTTCGGGTGAGTATCTGGCATCAGTGAGTGACGAATTAGTCAGG
GTGTGGAGCATTGGTTCTGGCAGCAAAGGGGAATGCATTCATGAGTTAAGCTGTACTGGC
AACAAATTCCATAGCTGTGTTTTCCATCCCACATTCCCCTCACTATTGGTTATCGGCTGT
TATGAGACTTTGGAGCTCTGGAACATGACTGAAAACAAGACACTGACTCTGAGTGCACAC
GACAAGCTTGTATCATCTTTGGCAGCATCAACTGTTAACGGTATGGTAGCTTCAGCTAGT
CATGACAAGTGCGTCAAGATCTGGAAGTGACTTTGCTCCTTTTTTTTCTTTTTTTGATTT
AATGACATCACAGCCAACCTTATCGTCTACGTGTATGTATCCAATGTCAGATTTCTCAGC
TTCTAATAGTTACTTTTGTGGTTGTCCATATTAGTTTAATGTAGATGTTAGAAAATGGGG
GCTTTTTGATTGTATTAACATACCCTGACAGCGAAAAAGGTTTTTGTTTCAAAGCCGCCT
GTGTTCTGGCAGAACAAAACTTGATTCGAATGTTTGGGGTGATGGATGGTAGTGATACCA
GTGCCGCAGATATTGCTGAGTCTGAATACATGTATGTAACAACTTTTGTACAAATTTTTG
TTGATCAGGAAAATACAATATATATATATATATATATATATCCTGTTATTGTGACGGTGA
TCTCACTGCAGTAAAGTGTTGAGTACATGAGTCTTATTATGGCTCTGTGATAATGATTGT
GG