Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g17040.1
CDS Infomation

gene=Cs4g17040
Sequence

ATGGTTGCTACTGCCGCAGCTTCTGCGTTCTTCCCAGTTTCCTCACCATCTGGGGATTCT
GTTGCAAAGACCAAAAATCTCGGATCTGCTAATCTGGGAGGTATTAAGTCAAAATCCTCT
TCTGGGAGTTTGCAGGTTAAGGCTAATGCGCAAGCACCTTCCAAGATAAATGGTACTTCA
GTTGGTTTGACAACACCAGCAGAAAGTTTGAAGAATGGTGATATCTCCACGTCATCACCT
CCTCCTAGGACTTTTATTAACCAGTTACCTGACTGGAGTATGCTTCTTGCTGCTATAACA
ACAATCTTCTTGGCAGCAGAGAAGCAGTGGATGATGCTTGATTGGAAACCAAGGCGATCT
GACATGCTTGTGGACCCATTTGGGATTGGGAAAATAGTTCAGGATGGTTTCATTTTCCGG
CAAAATTTCTCAATTAGATCATATGAGATAGGTGCTGATGGTACTGCATCTATAGAGACA
TTAATGAATCATTTACAGGAAACAGCGCTTAATCATGTTATGACTGCTGGTCTTCTAGAT
GCTGGCTTTGGTGCAACCCCAGCGATGGCTAAAAAGAACCTGATATGGGTGGTTACTCGG
ATGCAGGTTGTTGTAGACCGCTATCCCACTTGGAATGATGTTGTAAATGTAGAAACTTGG
GTTAGTGCATCTGGAAAAAATGGTATGCGGCGTGATTGGCTCATTCGCAATGCTAAGACA
GGTGAAACATTAACAAGAGCAACCAGTCTGTGGGTAATGATGAATAAACTGACTAGGAGG
TTGTCCAAAATGCCCGATGAAGTTCGTCAGGAAATTGAACCGTATTTTCTGAATTCTGAC
CCTGTTGTCGATGAGGATAGCAGGAAATTACCAAAACTTGGCGACAGTACTGCAGATTAT
GTTCGTAGAGGTTTAACTCCTAGGTGGAGTGATTTAGATGTCAACCAGCATGTCAATAAT
GTGAAGTACATTGGCTGGATCCTAGAGAGTGCTCCTCAGCAGATCTTGGAGAGTCATCAG
CTGGCATCTGTGACCCTGGAGTATAGGAGGGAGTGCGGAAGGGACAGTGTGTTGCAGTCC
CTGACTGCTGTCTCAGACAAGGACATTGGCAATTTGGTGAACTTGGGCAGTGTGGAATGC
CAGCACTTGCTCCGACTAGAGGAAGGTGCTGAAGTTTTGAGAGCAAGGACTGAATGGAGG
CCAAAGGATGCCCACAACTTTGGGAATGTTGGTCCAATCCCTGCAGAAAGCACTTAA

Peptide Sequence

PEP ID

Cs4g17040.1
PEP Infomation
Sequence

MVATAAASAFFPVSSPSGDSVAKTKNLGSANLGGIKSKSSSGSLQVKANAQAPSKINGTS
VGLTTPAESLKNGDISTSSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRS
DMLVDPFGIGKIVQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLD
AGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKT
GETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADY
VRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYRRECGRDSVLQS
LTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAHNFGNVGPIPAEST*

Transcript Sequence

Transcript ID

Cs4g17040.1
Transcript Infomation

gene=Cs4g17040 CDS=404-1660
Sequence

CCCACTAAACCGCTGGCCCCAAATCTTTTCTCTTTCTCTTCCCTAGAAACTGTCTCAGTT
TTTTTTTTCTCTCTCTCTCTACTTTTTTGTTTTTCTCTTTAATTCGATTTTTTCAAAGCG
AAACTTAACAAAATAATGTTTAAAAAAAAGAGATGAAAGTTCTACTCAAACGAAAAAGGT
AGCGAGAGAGAGATCGTAAACCCTAGAAGTTAGTGAGAAGCATCCGCATTTGCATTCGCT
CGCAGATCCAAATTGAAGAAGCAAATGAGCTTTTATCATCTTTGTTTATTCTTTTTTCAC
AGTTTTGTGTAATTTTTGGTGGCCGGATTTTCTTCGCTATTTTGTTACTCGTAAAATTAA
GGATTACTAGGGCCCTGATCTGTGGTTTACTCTACGGTTCAAGATGGTTGCTACTGCCGC
AGCTTCTGCGTTCTTCCCAGTTTCCTCACCATCTGGGGATTCTGTTGCAAAGACCAAAAA
TCTCGGATCTGCTAATCTGGGAGGTATTAAGTCAAAATCCTCTTCTGGGAGTTTGCAGGT
TAAGGCTAATGCGCAAGCACCTTCCAAGATAAATGGTACTTCAGTTGGTTTGACAACACC
AGCAGAAAGTTTGAAGAATGGTGATATCTCCACGTCATCACCTCCTCCTAGGACTTTTAT
TAACCAGTTACCTGACTGGAGTATGCTTCTTGCTGCTATAACAACAATCTTCTTGGCAGC
AGAGAAGCAGTGGATGATGCTTGATTGGAAACCAAGGCGATCTGACATGCTTGTGGACCC
ATTTGGGATTGGGAAAATAGTTCAGGATGGTTTCATTTTCCGGCAAAATTTCTCAATTAG
ATCATATGAGATAGGTGCTGATGGTACTGCATCTATAGAGACATTAATGAATCATTTACA
GGAAACAGCGCTTAATCATGTTATGACTGCTGGTCTTCTAGATGCTGGCTTTGGTGCAAC
CCCAGCGATGGCTAAAAAGAACCTGATATGGGTGGTTACTCGGATGCAGGTTGTTGTAGA
CCGCTATCCCACTTGGAATGATGTTGTAAATGTAGAAACTTGGGTTAGTGCATCTGGAAA
AAATGGTATGCGGCGTGATTGGCTCATTCGCAATGCTAAGACAGGTGAAACATTAACAAG
AGCAACCAGTCTGTGGGTAATGATGAATAAACTGACTAGGAGGTTGTCCAAAATGCCCGA
TGAAGTTCGTCAGGAAATTGAACCGTATTTTCTGAATTCTGACCCTGTTGTCGATGAGGA
TAGCAGGAAATTACCAAAACTTGGCGACAGTACTGCAGATTATGTTCGTAGAGGTTTAAC
TCCTAGGTGGAGTGATTTAGATGTCAACCAGCATGTCAATAATGTGAAGTACATTGGCTG
GATCCTAGAGAGTGCTCCTCAGCAGATCTTGGAGAGTCATCAGCTGGCATCTGTGACCCT
GGAGTATAGGAGGGAGTGCGGAAGGGACAGTGTGTTGCAGTCCCTGACTGCTGTCTCAGA
CAAGGACATTGGCAATTTGGTGAACTTGGGCAGTGTGGAATGCCAGCACTTGCTCCGACT
AGAGGAAGGTGCTGAAGTTTTGAGAGCAAGGACTGAATGGAGGCCAAAGGATGCCCACAA
CTTTGGGAATGTTGGTCCAATCCCTGCAGAAAGCACTTAAAACCCAAGTTTCTCGGAGAT
GCGGTGGTCGCGCTGCCGTGTGTCACATTGCTCGTGTAGAATGCTGTGTGCTCTTGGATC
TATATATGTTCGCTTATATATTTAAAAATATATATCTATATACACATATCTTATTCATCT
TCTTTCTTTAAAAAAAAAAAAAAGGTTGTAAGTTTCATTGTAATTAGCGTTTGCTGCGCT
GTGTTTCTCGCTCCCTGCATTGCCGAATCAATTAGCTAGCTGCTGAGGATGACTGAGTTT
GTATAGAGGGACAAGATTCACTTATGCTTTGCCTAACATTTTCGGTTGGTGGTGGTACCC
TCATGTTACCTTGACCTTTAGATGGACAGGACGTGTATATTTTTTGGTTTGGTTTTAGGG
TTCTAGTTAGAATCGAGGAGAGTTAGGCAACCGAATTTGTGTTTCGACTTTGCCAATAAT
AATTATTTTTTCATCAGCCAGCTTGTATGCCTAGCATGCCAGCCTCTTGACACGTGATCT
TGGTTTTTTTGTGCTGTGTGGGTCACCGTCTTTAATTTTTGTTTATAAATCCTAAGGTGA
TATTTAGGAGGAGAGAATAGAATGGAGAAAAGTAAT