Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g16770.1
CDS Infomation

gene=Cs4g16770
Sequence

ATGGCGGAGAGCCTTTCTGTGAATTTCTCGGGCCCTAAGAGTTTTTCGACGAAGCTGAAA
TCTAAATGCAAAGAAACCCTGTTCCCCGATGACCCTTTTAAGCAATTTCGAAACGAAAAA
CATAGAGCCATCAAAGCCTTGCAATATTTCATTCCGTTCTTTGAGTGGATACCTAATTAC
AATCTAAAATTACTCAGGTACGATGTCCTCGCCGGGATCACCATTACCAGCCTCGCCATC
CCTCAGGGTATCAGCTATGCCAAGCTTGCCAGCATTCCTCCGATCATCGGCCTCTATTCG
AGCTTTGTTCCACCACTTGTATATGCCGTATTCGGGAGCTCAAAGCATCTAGCAGTGGGA
ACGGTAGCAGCATGCTCGCTGCTAATAGCCGACACGATTGGACAAAAAGTGCCACCCAAA
AAGGATCCAACATTGTACCTTCACTTGGTTTTCACGGCTACCTTTTTCACAGGCATTTTC
CAGACAGCTTTAGGTTTTCTAAGGCTTGGAATTTTGGTAGATTTTTTGTCACATTCCACG
ATCACTGGTTTCATGGGAGGCACTGCTATAATAATATGCTTGCAACAACTGAAGGGCCTG
TTCGGATTGAAACATTTTACTACTAAAACTGACGTCGTTTCCGTCTTGCATGCAGTCTTC
AGCAATCGAAAAGAGTGGAGGTGGGAGAGCGCTGTTATAGGTATAAGCTTCCTCATTTTC
CTCCAATTCACTAGGTACCTGAAAAACAGAAAGCCAAAGCTATTTTGGGTATCAGCAATG
GCTCCCATGGTCACTGTTGTAGTCGGCTGTCTTTTTGCTTATTTCGCCCATGCGGAGAAA
CATGGAATACAAATTGTGGGTGACTTGAGAAAAGGAATAAATCCTCCTTCCATTGGCTAC
TTGAACTTTAAATCTGAATATCTCACAGTCACTGTCAAAGCTGGAATCATTACAGCCCTT
ATAGCTTTAGCTGAAGGCATAGCAATAGCAAGGAGCTTTGCAATAATGCAAAATGAACAA
ATTGATGGGAACAAAGAGATGATAGCTTTTGGTCTCATGAACATAGTTGGATCTTTCACT
TCATGCTACTTAACAACTGGGCCATTTTCAAAGACTGCTGTGAATTTCAATGCAGGGTGC
AAAACTGCCATGTCAAATGTTGTAATGTCATTTTGCATGATGCTTGTACTCTTGTTCTTG
GCTCCTCTCTTCAGTTACACACCTCTTGTAGCTCTATCAGCCATCATCATGTCCGCCATG
TTCGGGCTTATTAACTATGAAGAGGCTATTCTCCTCTTCAAAGTTGATAAGCTAGATTTT
AGCATTTGCATGGCAGCTTTCCTTGGGGTCGCCTTCATAAGCATGGACATTGGCCTCATG
CTCTCCGTGGGGCTTGCTTTACTTCGGACGCTTATATATGTGGCAAGGCCTGCTACTTGC
AAGCTTGGAAAAATCTCAGACTCGAATCTGTACCTGGATACAGAGCAGTATCAGCATGCA
CAAGGGTTCCCAGGAATCCTAATTCTGCAACTTGGTTCCCCTATTTACTTTGCAAATTGC
AATTACATTAGAGAAAGGGTTTTGAGATGGATCCGAGATGAACAGGTCTTATCAAATTCC
AAGCCGGATGTTATTGAGCATGTTTTACTAGATTTGTCAGGAGTTTCAACAATAGACATG
ACAGGAATTGCCGCATTTAGAGAAATACTCAGAATTTTGGAAGCAAAATCTATTAAGATG
AAATTAATAAATCCCAGGATTGGGGTTATGGATAAAATGATACTGTCAAAGTTCATCGAC
GTCATTGGGAAGGATTCGGTTTTCTTGTCAATTGAAGATGCAATTGATGCATGTCGGTTT
TCACTTCAAAAGGAGAAACACCAGAACGACTTGTCGGACATTTCTGCTTGA

Peptide Sequence

PEP ID

Cs4g16770.1
PEP Infomation
Sequence

MAESLSVNFSGPKSFSTKLKSKCKETLFPDDPFKQFRNEKHRAIKALQYFIPFFEWIPNY
NLKLLRYDVLAGITITSLAIPQGISYAKLASIPPIIGLYSSFVPPLVYAVFGSSKHLAVG
TVAACSLLIADTIGQKVPPKKDPTLYLHLVFTATFFTGIFQTALGFLRLGILVDFLSHST
ITGFMGGTAIIICLQQLKGLFGLKHFTTKTDVVSVLHAVFSNRKEWRWESAVIGISFLIF
LQFTRYLKNRKPKLFWVSAMAPMVTVVVGCLFAYFAHAEKHGIQIVGDLRKGINPPSIGY
LNFKSEYLTVTVKAGIITALIALAEGIAIARSFAIMQNEQIDGNKEMIAFGLMNIVGSFT
SCYLTTGPFSKTAVNFNAGCKTAMSNVVMSFCMMLVLLFLAPLFSYTPLVALSAIIMSAM
FGLINYEEAILLFKVDKLDFSICMAAFLGVAFISMDIGLMLSVGLALLRTLIYVARPATC
KLGKISDSNLYLDTEQYQHAQGFPGILILQLGSPIYFANCNYIRERVLRWIRDEQVLSNS
KPDVIEHVLLDLSGVSTIDMTGIAAFREILRILEAKSIKMKLINPRIGVMDKMILSKFID
VIGKDSVFLSIEDAIDACRFSLQKEKHQNDLSDISA*

Transcript Sequence

Transcript ID

Cs4g16770.1
Transcript Infomation

gene=Cs4g16770 CDS=1-1911
Sequence

ATGGCGGAGAGCCTTTCTGTGAATTTCTCGGGCCCTAAGAGTTTTTCGACGAAGCTGAAA
TCTAAATGCAAAGAAACCCTGTTCCCCGATGACCCTTTTAAGCAATTTCGAAACGAAAAA
CATAGAGCCATCAAAGCCTTGCAATATTTCATTCCGTTCTTTGAGTGGATACCTAATTAC
AATCTAAAATTACTCAGGTACGATGTCCTCGCCGGGATCACCATTACCAGCCTCGCCATC
CCTCAGGGTATCAGCTATGCCAAGCTTGCCAGCATTCCTCCGATCATCGGCCTCTATTCG
AGCTTTGTTCCACCACTTGTATATGCCGTATTCGGGAGCTCAAAGCATCTAGCAGTGGGA
ACGGTAGCAGCATGCTCGCTGCTAATAGCCGACACGATTGGACAAAAAGTGCCACCCAAA
AAGGATCCAACATTGTACCTTCACTTGGTTTTCACGGCTACCTTTTTCACAGGCATTTTC
CAGACAGCTTTAGGTTTTCTAAGGCTTGGAATTTTGGTAGATTTTTTGTCACATTCCACG
ATCACTGGTTTCATGGGAGGCACTGCTATAATAATATGCTTGCAACAACTGAAGGGCCTG
TTCGGATTGAAACATTTTACTACTAAAACTGACGTCGTTTCCGTCTTGCATGCAGTCTTC
AGCAATCGAAAAGAGTGGAGGTGGGAGAGCGCTGTTATAGGTATAAGCTTCCTCATTTTC
CTCCAATTCACTAGGTACCTGAAAAACAGAAAGCCAAAGCTATTTTGGGTATCAGCAATG
GCTCCCATGGTCACTGTTGTAGTCGGCTGTCTTTTTGCTTATTTCGCCCATGCGGAGAAA
CATGGAATACAAATTGTGGGTGACTTGAGAAAAGGAATAAATCCTCCTTCCATTGGCTAC
TTGAACTTTAAATCTGAATATCTCACAGTCACTGTCAAAGCTGGAATCATTACAGCCCTT
ATAGCTTTAGCTGAAGGCATAGCAATAGCAAGGAGCTTTGCAATAATGCAAAATGAACAA
ATTGATGGGAACAAAGAGATGATAGCTTTTGGTCTCATGAACATAGTTGGATCTTTCACT
TCATGCTACTTAACAACTGGGCCATTTTCAAAGACTGCTGTGAATTTCAATGCAGGGTGC
AAAACTGCCATGTCAAATGTTGTAATGTCATTTTGCATGATGCTTGTACTCTTGTTCTTG
GCTCCTCTCTTCAGTTACACACCTCTTGTAGCTCTATCAGCCATCATCATGTCCGCCATG
TTCGGGCTTATTAACTATGAAGAGGCTATTCTCCTCTTCAAAGTTGATAAGCTAGATTTT
AGCATTTGCATGGCAGCTTTCCTTGGGGTCGCCTTCATAAGCATGGACATTGGCCTCATG
CTCTCCGTGGGGCTTGCTTTACTTCGGACGCTTATATATGTGGCAAGGCCTGCTACTTGC
AAGCTTGGAAAAATCTCAGACTCGAATCTGTACCTGGATACAGAGCAGTATCAGCATGCA
CAAGGGTTCCCAGGAATCCTAATTCTGCAACTTGGTTCCCCTATTTACTTTGCAAATTGC
AATTACATTAGAGAAAGGGTTTTGAGATGGATCCGAGATGAACAGGTCTTATCAAATTCC
AAGCCGGATGTTATTGAGCATGTTTTACTAGATTTGTCAGGAGTTTCAACAATAGACATG
ACAGGAATTGCCGCATTTAGAGAAATACTCAGAATTTTGGAAGCAAAATCTATTAAGATG
AAATTAATAAATCCCAGGATTGGGGTTATGGATAAAATGATACTGTCAAAGTTCATCGAC
GTCATTGGGAAGGATTCGGTTTTCTTGTCAATTGAAGATGCAATTGATGCATGTCGGTTT
TCACTTCAAAAGGAGAAACACCAGAACGACTTGTCGGACATTTCTGCTTGAAAGACAAGT
AGTTGGACTAAATATTTGTAAATTTTGGTGTGTGATAATAATCAAGAATTTGACGAGGAT
ACTTTGGGGGATAGGTTGAGACCAAGGCCTAGTTCCATTAGTTAATGGGACAGCCTTATC
AAAATTTAACTCTAAATCTCATGCAACGTGATTTTCTCTTTTTTCAAAGAGAAAATATGA
AATTAGTAAATTTTGGCTTGTTAGCCAGCAACAATGAATAAAATACCATAATTTTTGTG