Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g15880.1
CDS Infomation

gene=Cs4g15880
Sequence

ATGCAGAAGAATCAAGATCGACGGTCAAGATCTGCCAAGCCCGCCACCATTCATGGCTGC
GCCCAGTCTGGGGATCTTCTCGCCTTCCAGAGGCTACTTCGAGAGAACCCATCTCTTCTC
AATGAAAGAAATCCCGTTATGGCACAAACACCCCTTCATGTTTCCGCTGGTTATAACAAG
GCTGAAATAGTTAAATCTCTGCTTGAATGGCCAGGAAACGATAAGGTTGAGTTGGAGGCC
CAAAACATGTATGGAGAAACTCCATTGCACATGGCAGCGAAGAATGGATGTAATGAAGCT
GCAAAGTTACTTCTTGCTCATGGTGCTTTTATTGAAGCCAAAGCTAATAATGGGATGACA
CCATTACACCTTTCCGTCTGGTACTCTATTCGGTCTGAAGACTACGCAACTGTTAAGACA
TTGCTTGAGTATAATGCTGACTGCAGTGCTAAGGACAATGAGGGCAAGACTCCTCTAGAT
CATCTCTCAAATGGCCCAGGCAGTGCGAAGTTGCGTGAACTATTACTCTGGCACAGTGAA
GAGCAGCGGAAGAGAAGAGCACTTGAAGCGTGCAGCGAAACAAAAGCCAAGATGGATGAA
CTTGAAAATGAACTATCAAACATTGTGGGATTGCATGAGCTCAAGATACAACTTCGAAAA
TGGGCAAAAGGGATGCTTCTGGATGAGAGGCGCAAAGCCCTTGGTTTGAAAGTTGGTGCT
AGAAGACCTCCCCATATGGCATTCCTTGGAAATCCTGGAACAGGGAAAACTATGGTAGCT
CGAATTCTCGGAAGATTATTGTATATGGTGGGAATTCTGCCTACTGACAGGGTAACCGAA
GTACAGCGAACAGATTTGGTTGGTGAATTTGTTGGTCATACTGGACCAAAGACTAGAAGA
AGGATAAAAGAAGCTGAGGGAGGAATTCTTTTTGTGGACGAAGCTTATCGATTAATACCC
ATGCAGAAAGCAGATGATAAAGACTATGGCATAGAAGCCTTAGAAGAGATCATGTCTGTT
ATGGATGGCGGAAAAGTTGTAGTCATATTTGCTGGCTACAGTGAACCAATGAAGCGCGTA
ATTGCTTCTAATGAAGGCTTCTGCCGAAGGGTAACCAAGTTTTTTCATTTTAATGATTTC
AATTCTGAAGAGTTGGCCAAGATCCTCCATATCAAGATGAACAATCAAACAGAGGATAGC
TTGTTGTATGGATTTAAGCTGCACTCTTCTTGTAGCATGGATGCAATTGCAGCACTCATA
GAAAAAGAAACAACAGAAAAGCAGCGCAGGGAGATGAATGGAGGTTTAGTGGATCCGATG
CTAGTCAATGCAAGGGAGAATTTGGACCTTAGGCTCAGTTTTGACTGTTTAGACACTGAT
GAATTGCGCACCATCACCTTAGAGGATTTGGAAGCAGGTCTAAAGCTTTTATTACGCTTA
GGCATTTAG

Peptide Sequence

PEP ID

Cs4g15880.1
PEP Infomation
Sequence

MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK
AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT
PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSE
EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA
RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR
RIKEAEGGILFVDEAYRLIPMQKADDKDYGIEALEEIMSVMDGGKVVVIFAGYSEPMKRV
IASNEGFCRRVTKFFHFNDFNSEELAKILHIKMNNQTEDSLLYGFKLHSSCSMDAIAALI
EKETTEKQRREMNGGLVDPMLVNARENLDLRLSFDCLDTDELRTITLEDLEAGLKLLLRL
GI*

Transcript Sequence

Transcript ID

Cs4g15880.1
Transcript Infomation

gene=Cs4g15880 CDS=373-1821
Sequence

TGATACTTCTCTTTCAAAGTTTCAAGCCGAGTCTCTTACCATCAGCCCAAATCTTAATTC
AATGTCACTGACCATAACAACTCATGTTCCACGTGAACTAATAATAATAATACATAATTG
TGAATAAATGAGGGATATTTAAGTAATTATACCAAACTAGAAAAAGAAAGTCCAGTGGCT
AAAAACTGGAGGGGACAGTGAAGCAGCAGCAGTGTTAGAAGAATCGGGCGCAAGAGTCGG
AGGGTGGGGAATTAATTTCCTTAAGTGACCGCCAAAGACTCAACAAGAAACAAAAAATTC
TATCTTTATCTGAATCTCCATTTGGCTTTTAGATTAAGAGGGATTAGGCGCCAATTACCT
CAGCTGGGGCAGATGCAGAAGAATCAAGATCGACGGTCAAGATCTGCCAAGCCCGCCACC
ATTCATGGCTGCGCCCAGTCTGGGGATCTTCTCGCCTTCCAGAGGCTACTTCGAGAGAAC
CCATCTCTTCTCAATGAAAGAAATCCCGTTATGGCACAAACACCCCTTCATGTTTCCGCT
GGTTATAACAAGGCTGAAATAGTTAAATCTCTGCTTGAATGGCCAGGAAACGATAAGGTT
GAGTTGGAGGCCCAAAACATGTATGGAGAAACTCCATTGCACATGGCAGCGAAGAATGGA
TGTAATGAAGCTGCAAAGTTACTTCTTGCTCATGGTGCTTTTATTGAAGCCAAAGCTAAT
AATGGGATGACACCATTACACCTTTCCGTCTGGTACTCTATTCGGTCTGAAGACTACGCA
ACTGTTAAGACATTGCTTGAGTATAATGCTGACTGCAGTGCTAAGGACAATGAGGGCAAG
ACTCCTCTAGATCATCTCTCAAATGGCCCAGGCAGTGCGAAGTTGCGTGAACTATTACTC
TGGCACAGTGAAGAGCAGCGGAAGAGAAGAGCACTTGAAGCGTGCAGCGAAACAAAAGCC
AAGATGGATGAACTTGAAAATGAACTATCAAACATTGTGGGATTGCATGAGCTCAAGATA
CAACTTCGAAAATGGGCAAAAGGGATGCTTCTGGATGAGAGGCGCAAAGCCCTTGGTTTG
AAAGTTGGTGCTAGAAGACCTCCCCATATGGCATTCCTTGGAAATCCTGGAACAGGGAAA
ACTATGGTAGCTCGAATTCTCGGAAGATTATTGTATATGGTGGGAATTCTGCCTACTGAC
AGGGTAACCGAAGTACAGCGAACAGATTTGGTTGGTGAATTTGTTGGTCATACTGGACCA
AAGACTAGAAGAAGGATAAAAGAAGCTGAGGGAGGAATTCTTTTTGTGGACGAAGCTTAT
CGATTAATACCCATGCAGAAAGCAGATGATAAAGACTATGGCATAGAAGCCTTAGAAGAG
ATCATGTCTGTTATGGATGGCGGAAAAGTTGTAGTCATATTTGCTGGCTACAGTGAACCA
ATGAAGCGCGTAATTGCTTCTAATGAAGGCTTCTGCCGAAGGGTAACCAAGTTTTTTCAT
TTTAATGATTTCAATTCTGAAGAGTTGGCCAAGATCCTCCATATCAAGATGAACAATCAA
ACAGAGGATAGCTTGTTGTATGGATTTAAGCTGCACTCTTCTTGTAGCATGGATGCAATT
GCAGCACTCATAGAAAAAGAAACAACAGAAAAGCAGCGCAGGGAGATGAATGGAGGTTTA
GTGGATCCGATGCTAGTCAATGCAAGGGAGAATTTGGACCTTAGGCTCAGTTTTGACTGT
TTAGACACTGATGAATTGCGCACCATCACCTTAGAGGATTTGGAAGCAGGTCTAAAGCTT
TTATTACGCTTAGGCATTTAGGATAAGAAATTTAAAAGACTAGCTTGTAATCATTCTTTT
GGCAGCCTGACTGGGTTACATTGAATTGCGAAGCAGGAGATCTGTTTACATATGCCTTCA
TTCTTTTGCCTCCAAACTGGGGGGTTTGTTGTTGAATTTGCTGCTTGAGTGGATCTATTG
ATGCCCTTGGGGTTTTTCTTATGTATTCTAGTGAACTTGTTTTTTTATATTTGATCTTTT
GGAACAGCAATAAATTTCTTTCACAGCATGTTTACTTGGCAATTGATGTAGTTGTTGCTT
CAAGAACTCGGTTCATTAATCATTTTGGCGTGGTTAACTTGAAGCTAAAC