Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g11980.1
CDS Infomation

gene=Cs4g11980
Sequence

ATGGATCTTAAGAGTCTTCCATCTTCAAAAGAAAGTACGAAAGCTGATGAGAATCGTCGA
TCCTCGAATTATCATCCTAGCATTTGGGGTGATCATTTCATTAATGTGTCATCAAATGAC
AAGTACCCTAATGCGGAAGTGGAAAAGCGGTTTGAAACGTTAAAAGCAGAAGTTGAAAAG
TTGCTAATGAGCAATAATACAGCATGGAAAACAATTGAAGAAATTGTGACTCTCGTTGAT
CAACTTCAACGCCTTGGCGTGGCCTATCACTTTGAAAATGAGATCAAAGAGGACTTACAA
TCAATCTATAATAGCCATGTCAATAGCAATTGTGATGTTAATTACGATCATAATAATGAT
CTCTACACAGTTGCTCTTCGATTTCGGCTTCTACGGCAACATGGTTACAAGGTGTCAGCA
GATATATTTAAAAAATTCAAAGATGAAAAAGGTGAATTCAAGGCCATGTTAACAAATGAT
GCGAGAGGCTTGCTGTGTTTGTATGAGGCGTCATATTTGAGAGTACAAGGGGAGAATATA
TTGGAAGAAGCGTGTGAATTCTCTAGGAAGCACTTAAAATCTTTATTGCCCCATATAAGC
ACTTCTCTAGCTAACCAAGTTGAGCACTCCCTGGAGATACCTTTGCACAGAGGGATGCCA
AGATTGGAGGCAAGGCAGTACATTTCCATCTATGAAGCAGACAATTCAACACGAAATGAG
CTAATATTAGAACTTGCAAAGCTAGATTTTAATCTTTTGCAGGAGTTACACCGGAGAGAG
CTAAGTGAGATCTCAAGGTGGTGGAAAGATATTGATTTTGCAACAAAGCTACCTTTTGCA
AGGGATAGGTTGGTGGAGTGCTACTTTTGGATATTAGGAGTTTATTTTGAGCCTAAATAT
TCCACAACTAGAAAATTTATGACCAAAATCATCGCAATAGCTTCTGTCATAGATGATATC
TATGATGTGTATGGCACTTTGGAAGAACTTAAGCTATTCACTCATGCAATCGAGAGGTGG
GAAGTTGTGGCAGCAAATGAGTTACCAAAATACATGCAAGTCTGTTATTTTGCCCTCTTA
GATGTTGTCAAAGAAATGGAGGACAAGCTGGTGAATAAAGAACCACTTTGTTGCATGTAC
TATGCAAAAGAGGCGATAAAAGGCCTGGTAAGGGCTTACTTTGTGGAAGCAAAGTGGTTC
AATGCCAAATATGTGCCAACATTTGAGGAATACATGGAGAATTCTACAATGAGCAGTGGA
TACCCCATGCTTGCTGTTGAAGCTCTTGTAGGCTTAGAAGATATGGCAATTACCAAGCAA
GCACTTGATTGGGCGATTAGTGTTCCTAAAATTATTAGATATTCCTCCTTGATTGCTCGT
CTTGATGATGACGTCCGTACTTACAAGGTCGAGCAAGAGAGAGGGGATGCACCATCAAGT
GTGGAATGTTACATGCAACAGTATGGCGTGTCTGAAGAAGAAGCGTGCAACAAAATCAAA
GAAATGGTGGAAATTGAATGGATGAACATCAATGAAGAAATTCAAGATCCGAACCATCCT
CCGTTGCAATGGCTTCTTCCTTCTCTGAATCTTGCTCGGATGATGGTGGTGTTATATCAA
AATGGAGATGGTTACACTAACTCGTCAGGGAAAACCAAGGATAGAATCGCATCATTGCTT
GTTGATCCTCTTCCCATGTAA

Peptide Sequence

PEP ID

Cs4g11980.1
PEP Infomation
Sequence

MDLKSLPSSKESTKADENRRSSNYHPSIWGDHFINVSSNDKYPNAEVEKRFETLKAEVEK
LLMSNNTAWKTIEEIVTLVDQLQRLGVAYHFENEIKEDLQSIYNSHVNSNCDVNYDHNND
LYTVALRFRLLRQHGYKVSADIFKKFKDEKGEFKAMLTNDARGLLCLYEASYLRVQGENI
LEEACEFSRKHLKSLLPHISTSLANQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNE
LILELAKLDFNLLQELHRRELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKY
STTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALL
DVVKEMEDKLVNKEPLCCMYYAKEAIKGLVRAYFVEAKWFNAKYVPTFEEYMENSTMSSG
YPMLAVEALVGLEDMAITKQALDWAISVPKIIRYSSLIARLDDDVRTYKVEQERGDAPSS
VECYMQQYGVSEEEACNKIKEMVEIEWMNINEEIQDPNHPPLQWLLPSLNLARMMVVLYQ
NGDGYTNSSGKTKDRIASLLVDPLPM*

Transcript Sequence

Transcript ID

Cs4g11980.1
Transcript Infomation

gene=Cs4g11980 CDS=1-1701
Sequence

ATGGATCTTAAGAGTCTTCCATCTTCAAAAGAAAGTACGAAAGCTGATGAGAATCGTCGA
TCCTCGAATTATCATCCTAGCATTTGGGGTGATCATTTCATTAATGTGTCATCAAATGAC
AAGTACCCTAATGCGGAAGTGGAAAAGCGGTTTGAAACGTTAAAAGCAGAAGTTGAAAAG
TTGCTAATGAGCAATAATACAGCATGGAAAACAATTGAAGAAATTGTGACTCTCGTTGAT
CAACTTCAACGCCTTGGCGTGGCCTATCACTTTGAAAATGAGATCAAAGAGGACTTACAA
TCAATCTATAATAGCCATGTCAATAGCAATTGTGATGTTAATTACGATCATAATAATGAT
CTCTACACAGTTGCTCTTCGATTTCGGCTTCTACGGCAACATGGTTACAAGGTGTCAGCA
GATATATTTAAAAAATTCAAAGATGAAAAAGGTGAATTCAAGGCCATGTTAACAAATGAT
GCGAGAGGCTTGCTGTGTTTGTATGAGGCGTCATATTTGAGAGTACAAGGGGAGAATATA
TTGGAAGAAGCGTGTGAATTCTCTAGGAAGCACTTAAAATCTTTATTGCCCCATATAAGC
ACTTCTCTAGCTAACCAAGTTGAGCACTCCCTGGAGATACCTTTGCACAGAGGGATGCCA
AGATTGGAGGCAAGGCAGTACATTTCCATCTATGAAGCAGACAATTCAACACGAAATGAG
CTAATATTAGAACTTGCAAAGCTAGATTTTAATCTTTTGCAGGAGTTACACCGGAGAGAG
CTAAGTGAGATCTCAAGGTGGTGGAAAGATATTGATTTTGCAACAAAGCTACCTTTTGCA
AGGGATAGGTTGGTGGAGTGCTACTTTTGGATATTAGGAGTTTATTTTGAGCCTAAATAT
TCCACAACTAGAAAATTTATGACCAAAATCATCGCAATAGCTTCTGTCATAGATGATATC
TATGATGTGTATGGCACTTTGGAAGAACTTAAGCTATTCACTCATGCAATCGAGAGGTGG
GAAGTTGTGGCAGCAAATGAGTTACCAAAATACATGCAAGTCTGTTATTTTGCCCTCTTA
GATGTTGTCAAAGAAATGGAGGACAAGCTGGTGAATAAAGAACCACTTTGTTGCATGTAC
TATGCAAAAGAGGCGATAAAAGGCCTGGTAAGGGCTTACTTTGTGGAAGCAAAGTGGTTC
AATGCCAAATATGTGCCAACATTTGAGGAATACATGGAGAATTCTACAATGAGCAGTGGA
TACCCCATGCTTGCTGTTGAAGCTCTTGTAGGCTTAGAAGATATGGCAATTACCAAGCAA
GCACTTGATTGGGCGATTAGTGTTCCTAAAATTATTAGATATTCCTCCTTGATTGCTCGT
CTTGATGATGACGTCCGTACTTACAAGGTCGAGCAAGAGAGAGGGGATGCACCATCAAGT
GTGGAATGTTACATGCAACAGTATGGCGTGTCTGAAGAAGAAGCGTGCAACAAAATCAAA
GAAATGGTGGAAATTGAATGGATGAACATCAATGAAGAAATTCAAGATCCGAACCATCCT
CCGTTGCAATGGCTTCTTCCTTCTCTGAATCTTGCTCGGATGATGGTGGTGTTATATCAA
AATGGAGATGGTTACACTAACTCGTCAGGGAAAACCAAGGATAGAATCGCATCATTGCTT
GTTGATCCTCTTCCCATGTAA