Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g10000.1
CDS Infomation

gene=Cs4g10000
Sequence

ATGGAGTTCAGGCCTCGAAACTACATAGCCGAAGAGGAATCCCACGCGCTGCCTCGATCA
CGCGCCGATGATCACCCTCTCTTCGCTCCATCTACATCGTCCAACCATCACAAGGTTGAT
GTCGTGGATCATGAAAGTCATGATTTCTTTGATCCACTGAGATCTCCTGCAGCTAATGCA
GTGGCTTTAAACAAGGATGTGGAAGATGGTGAGAGTAGTTCTACGGTTTCAAGTGAAGCT
GCTGCTGAAGTTTCAGTTAAAGAATGGACCACTTTTAAGAGATTCTTAATGCAGAAATTT
CCTGTCTCCAAAATGGTTTCAGTTTCTTTAATGCCTGATGTAATAATTAAAACTGGCAAG
GCAAATGTGAAAGACTCAACAACTAAGCATCTAAAGGAATTGGATGATCCTGCAAATTTT
GCTGAAGAGGATGTCAAGGTGATAACGGGGCAAGAATATGTCTCACGACTACATGAGCTG
AAGGATGAAATTAAGCGTGCTTGGACTGCTGAAGATCGAGTAACATCTCTTAAATTATCC
ATAAAGGTTGCTAGACTTCTGATGGATACATCAGTTTTACAATTTTATCCCACTCTTTTT
GTTCTTGTCGCGGAGATAATGGACATGCTCGGGAATTTGGTATGGGAACGCATCAAGCAG
AAAGCTGAATTTGGTGAAGATGGATCAAGGCTCTGCTACTTATCAGAGAATTTTAAGGAA
ATTAATATTTGCGTTGAAGCCAAAGAAACTTGCAATAATTGGTTTTGCAAAGTTGGTTCT
GTCCGAGAGCTTCTTCCACGCATTTACTTGGAGCTAGCAATATTGCCTTGCTGGCGTTTT
TTGAACGACCGACCTGCCAACAGTCTCCAGCGCCTGGTACTGATGACAAGAGGGTTAGCA
GATCCATTGGCATCTGTCTATTGTCGGCTATATATGGCCCACTGTGCACGGAAGTTACCC
TCATGTGATACAGGACACCTAATTACATCTATAAATGACATCAAAATTCTATTAACGCGG
GTTTTGTCAACAAAGGAAGCAGCACATGGAAAATCTGTAGACAACAGAAGGTTGCTTGTC
AGTCTAATGGAACCAACCATTGAGTATATTATGAAGTGCATTTTTAAGGATGCCTCTCAG
AGGCAAGTAGGCACAGTCCTTATGGAGCTTGGACTAGGAAGGAATCAGGTTGAGTTGTTT
GGAAGTAACCCCTGTGTCTCAGTAGTTCTTCATCATCTGCTCAAGGAACTTCCAACTGAA
ATAGTCGGCTCTTATGCTGTGGAGATCCTTCATCTGATTGAGTACAGCAATGATAAATCT
TATGATCAGTGTTTGAATTACAGATTACTTGGATTCAGACTGTGTGAGAGGAGACCCACA
CTGGACATTTTGAATGCAGCGGTTGATAGAATTATTCAGGTTGTTACTCTACTTGATGAA
CTTGATGACTTCCTGAAGGTTGTGGATCCTTATGTGGATATTATTCTTCAGAATCAGATG
GATAATCATCTGAATACTATTTTAGAAGGTATTTCAGAAAGAGCGTGCAAAAAAGAGATC
GTTGATAATGATGTGGTAGGCTTGCAGTCCATCTTGATGAAGATTCTTTCTCATTTCAAG
GACTTAGAAGATGTATTTGCTTTGGGACATTTTCTTGAGATATTGGATGTAATGTATGGG
AGCTCACGGATTAGTATTGATATGCAAATCCTCAATATGGCTACAAGAAATGGTTGTATA
AATGATCCTACTACCGTACAGTTGCTTTTTGAAATTTGTCAGGCTCTACATGATGGTATA
GATTTTGTAAACTCCAAAGGTGATGATTATCAAGCGGCACGTCTGATTTCTCGTTTTGTC
CTCATGGTTGACTATGGAGCAGAGATGGAACGACATTTAACATTTCTAGTTGAATGTCGT
GGAGCTTTTGGTAGCATAAATGAACTTAAGGAAACTCTTGTTCACTCAAGCAATCATTTA
GCGACTAAAGCTTTGAAAGATGGAAGGAAACATTTAAGTTTTGTAAAATCTTGCATAGCA
TTTAGCGAAGTCACTATACCTTCAATTTCAGATCACATTAGGCAGTTAAATCTATACATT
GAGACTTCCGAGGTTGCCTTGTTAGCTGGTTTAATTTCTCATTCAGATGGACTGGTAGAC
TCAGCAATCAGCTGTTTACAAAGTGTTGACTTGATAAACGGCTCCCTAACACCAGTTGAT
GTTGATGGTATGGTAACCTCAATTCAAAAATTATGCAGCCTCTTGGTTATTGTTCCAGGT
AATCCTGAACTAGGGTTTACACACACTCTTAAGAGTATACTTTCTCTCATTACCTCCCAA
TCATGGATCACATCAAAAATAAAGATAAGGATATCTTGTGCTATTGTTTCATTGTCAGCA
ACTCTTTCTCAAAATAAGCTGCCATACAATGCAGATCTCGAGATTTTGAGTAATGACTTG
TTGTTCTACGGTGATTCATCCTATGTACAAGAACTTCTCTCTTTTTCTGAGCATGTACTT
CAGAATTTAGTTGAAATCATTGAACAAGAGCCTTCAGGGGCTGCTCGCGGAAGCATGGCA
CTTGAAGCTTGCAACTGCATAGCAGCATCATTCAAGATCAATCACAATATACAACCAGTT
TGCTCCAAACTCATTGAAACTGCCAAATCGAATTTGAGCACCAATGACGCGTATCTGCAG
TCCACCATCAAGGTTTTGGATAAGCACTTGCCAACTTCTGGAATTTCAGCTTCTACAACC
ATCTGA

Peptide Sequence

PEP ID

Cs4g10000.1
PEP Infomation
Sequence

MEFRPRNYIAEEESHALPRSRADDHPLFAPSTSSNHHKVDVVDHESHDFFDPLRSPAANA
VALNKDVEDGESSSTVSSEAAAEVSVKEWTTFKRFLMQKFPVSKMVSVSLMPDVIIKTGK
ANVKDSTTKHLKELDDPANFAEEDVKVITGQEYVSRLHELKDEIKRAWTAEDRVTSLKLS
IKVARLLMDTSVLQFYPTLFVLVAEIMDMLGNLVWERIKQKAEFGEDGSRLCYLSENFKE
INICVEAKETCNNWFCKVGSVRELLPRIYLELAILPCWRFLNDRPANSLQRLVLMTRGLA
DPLASVYCRLYMAHCARKLPSCDTGHLITSINDIKILLTRVLSTKEAAHGKSVDNRRLLV
SLMEPTIEYIMKCIFKDASQRQVGTVLMELGLGRNQVELFGSNPCVSVVLHHLLKELPTE
IVGSYAVEILHLIEYSNDKSYDQCLNYRLLGFRLCERRPTLDILNAAVDRIIQVVTLLDE
LDDFLKVVDPYVDIILQNQMDNHLNTILEGISERACKKEIVDNDVVGLQSILMKILSHFK
DLEDVFALGHFLEILDVMYGSSRISIDMQILNMATRNGCINDPTTVQLLFEICQALHDGI
DFVNSKGDDYQAARLISRFVLMVDYGAEMERHLTFLVECRGAFGSINELKETLVHSSNHL
ATKALKDGRKHLSFVKSCIAFSEVTIPSISDHIRQLNLYIETSEVALLAGLISHSDGLVD
SAISCLQSVDLINGSLTPVDVDGMVTSIQKLCSLLVIVPGNPELGFTHTLKSILSLITSQ
SWITSKIKIRISCAIVSLSATLSQNKLPYNADLEILSNDLLFYGDSSYVQELLSFSEHVL
QNLVEIIEQEPSGAARGSMALEACNCIAASFKINHNIQPVCSKLIETAKSNLSTNDAYLQ
STIKVLDKHLPTSGISASTTI*

Transcript Sequence

Transcript ID

Cs4g10000.1
Transcript Infomation

gene=Cs4g10000 CDS=1-2766
Sequence

ATGGAGTTCAGGCCTCGAAACTACATAGCCGAAGAGGAATCCCACGCGCTGCCTCGATCA
CGCGCCGATGATCACCCTCTCTTCGCTCCATCTACATCGTCCAACCATCACAAGGTTGAT
GTCGTGGATCATGAAAGTCATGATTTCTTTGATCCACTGAGATCTCCTGCAGCTAATGCA
GTGGCTTTAAACAAGGATGTGGAAGATGGTGAGAGTAGTTCTACGGTTTCAAGTGAAGCT
GCTGCTGAAGTTTCAGTTAAAGAATGGACCACTTTTAAGAGATTCTTAATGCAGAAATTT
CCTGTCTCCAAAATGGTTTCAGTTTCTTTAATGCCTGATGTAATAATTAAAACTGGCAAG
GCAAATGTGAAAGACTCAACAACTAAGCATCTAAAGGAATTGGATGATCCTGCAAATTTT
GCTGAAGAGGATGTCAAGGTGATAACGGGGCAAGAATATGTCTCACGACTACATGAGCTG
AAGGATGAAATTAAGCGTGCTTGGACTGCTGAAGATCGAGTAACATCTCTTAAATTATCC
ATAAAGGTTGCTAGACTTCTGATGGATACATCAGTTTTACAATTTTATCCCACTCTTTTT
GTTCTTGTCGCGGAGATAATGGACATGCTCGGGAATTTGGTATGGGAACGCATCAAGCAG
AAAGCTGAATTTGGTGAAGATGGATCAAGGCTCTGCTACTTATCAGAGAATTTTAAGGAA
ATTAATATTTGCGTTGAAGCCAAAGAAACTTGCAATAATTGGTTTTGCAAAGTTGGTTCT
GTCCGAGAGCTTCTTCCACGCATTTACTTGGAGCTAGCAATATTGCCTTGCTGGCGTTTT
TTGAACGACCGACCTGCCAACAGTCTCCAGCGCCTGGTACTGATGACAAGAGGGTTAGCA
GATCCATTGGCATCTGTCTATTGTCGGCTATATATGGCCCACTGTGCACGGAAGTTACCC
TCATGTGATACAGGACACCTAATTACATCTATAAATGACATCAAAATTCTATTAACGCGG
GTTTTGTCAACAAAGGAAGCAGCACATGGAAAATCTGTAGACAACAGAAGGTTGCTTGTC
AGTCTAATGGAACCAACCATTGAGTATATTATGAAGTGCATTTTTAAGGATGCCTCTCAG
AGGCAAGTAGGCACAGTCCTTATGGAGCTTGGACTAGGAAGGAATCAGGTTGAGTTGTTT
GGAAGTAACCCCTGTGTCTCAGTAGTTCTTCATCATCTGCTCAAGGAACTTCCAACTGAA
ATAGTCGGCTCTTATGCTGTGGAGATCCTTCATCTGATTGAGTACAGCAATGATAAATCT
TATGATCAGTGTTTGAATTACAGATTACTTGGATTCAGACTGTGTGAGAGGAGACCCACA
CTGGACATTTTGAATGCAGCGGTTGATAGAATTATTCAGGTTGTTACTCTACTTGATGAA
CTTGATGACTTCCTGAAGGTTGTGGATCCTTATGTGGATATTATTCTTCAGAATCAGATG
GATAATCATCTGAATACTATTTTAGAAGGTATTTCAGAAAGAGCGTGCAAAAAAGAGATC
GTTGATAATGATGTGGTAGGCTTGCAGTCCATCTTGATGAAGATTCTTTCTCATTTCAAG
GACTTAGAAGATGTATTTGCTTTGGGACATTTTCTTGAGATATTGGATGTAATGTATGGG
AGCTCACGGATTAGTATTGATATGCAAATCCTCAATATGGCTACAAGAAATGGTTGTATA
AATGATCCTACTACCGTACAGTTGCTTTTTGAAATTTGTCAGGCTCTACATGATGGTATA
GATTTTGTAAACTCCAAAGGTGATGATTATCAAGCGGCACGTCTGATTTCTCGTTTTGTC
CTCATGGTTGACTATGGAGCAGAGATGGAACGACATTTAACATTTCTAGTTGAATGTCGT
GGAGCTTTTGGTAGCATAAATGAACTTAAGGAAACTCTTGTTCACTCAAGCAATCATTTA
GCGACTAAAGCTTTGAAAGATGGAAGGAAACATTTAAGTTTTGTAAAATCTTGCATAGCA
TTTAGCGAAGTCACTATACCTTCAATTTCAGATCACATTAGGCAGTTAAATCTATACATT
GAGACTTCCGAGGTTGCCTTGTTAGCTGGTTTAATTTCTCATTCAGATGGACTGGTAGAC
TCAGCAATCAGCTGTTTACAAAGTGTTGACTTGATAAACGGCTCCCTAACACCAGTTGAT
GTTGATGGTATGGTAACCTCAATTCAAAAATTATGCAGCCTCTTGGTTATTGTTCCAGGT
AATCCTGAACTAGGGTTTACACACACTCTTAAGAGTATACTTTCTCTCATTACCTCCCAA
TCATGGATCACATCAAAAATAAAGATAAGGATATCTTGTGCTATTGTTTCATTGTCAGCA
ACTCTTTCTCAAAATAAGCTGCCATACAATGCAGATCTCGAGATTTTGAGTAATGACTTG
TTGTTCTACGGTGATTCATCCTATGTACAAGAACTTCTCTCTTTTTCTGAGCATGTACTT
CAGAATTTAGTTGAAATCATTGAACAAGAGCCTTCAGGGGCTGCTCGCGGAAGCATGGCA
CTTGAAGCTTGCAACTGCATAGCAGCATCATTCAAGATCAATCACAATATACAACCAGTT
TGCTCCAAACTCATTGAAACTGCCAAATCGAATTTGAGCACCAATGACGCGTATCTGCAG
TCCACCATCAAGGTTTTGGATAAGCACTTGCCAACTTCTGGAATTTCAGCTTCTACAACC
ATCTGA