Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g08220.3
CDS Infomation

gene=Cs4g08220
Sequence

ATGGCATCAGAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTTGAGTTTG
ATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCC
TCCGATGCATTGGATAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCC
CAACCAGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTATTATT
GACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAATTGCTAGG
TCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTGAGCATGATTGGT
CAGTTTGGTGTTGGTTTCTACTCAGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCC
AAGCACAACGATGATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATTCACTGTT
ACCAGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCACCTCAAG
GAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATTTGATTAAGAAGCACTCT
GAGTTCATTAGTTACCCAATTTCCCTCTGGATTGAGAAGACCACTGAGAAGGAGATTTCT
GATGATGAGGACGAGGAAGAAAAGAAGGATGAGGAGGGTAAAGTTGAGGATGTTGATGAA
GAGAAAGAGAAGGAAGAGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGAGTGGTCA
TTGGTGAACAAGCAGAAACCCATTTGGATGAGGAAACCCGAGGAGATTACAAAAGAAGAG
TATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACTTGGCTGTGAAGCAC
TTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTTTGTTCCCAAGAGGGCACCT
TTTGATCTCTTTGACACAAGGAAGAAGCCCAATAACATCAAGCTCTACGTCCGCCGTGTC
TTCATCATGGACAACTGTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATT
GTTGATTCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACGCTCCAGCAGAACAAGATC
TTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATTGCT
GAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGCTTGGT
ATCCACGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACC
AAGAGTGGTGATGAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAG
AATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCCATTTCTT
GAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGATGAGTAC
GCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCGACCAAAGAAGGT
CTCAAGCTTGATGAGAGTGAAGATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTT
GAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTG
TCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATGGACAGCC
AACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAACAGCATGGCTGGTTACATG
TCCAGCAAGAAGACCATGGAGATCAATCCGGAGAACCCCATCATGGAGGAGCTCAGGAAG
AGGGCTGATGCGGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAG
ACTGCTCTCCTCACTTCTGGTTTCAGCCTTGATGACCCTAACACTTTCGGCAACAGAATC
CACAGGATGTTGAAACTCGGGCTGAGCATCGAGGAGGATGCTGGTGATGCTGATGCTGAC
ATGCCACCATTGGAGGATGCTGCTGACGATGCTGAGGGCAGCAAGATGGAGGAAGTTGAT
TAA

Peptide Sequence

PEP ID

Cs4g08220.3
PEP Infomation
Sequence

MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA
QPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIG
QFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGEPLGRGTKITLHLK
EDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDE
EKEKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKH
FSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGI
VDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLG
IHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFL
EKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKF
EGLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYM
SSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRI
HRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD*

Transcript Sequence

Transcript ID

Cs4g08220.3
Transcript Infomation

gene=Cs4g08220 CDS=368-2470
Sequence

CAACAATCTCACAAACAAACGCGATTGCACAACGAAACACCACAACCGCGGCCAACCACA
CACGTGGCAACCGGCCAAACCCCAATGTGAAATCAACAAATCGGCTGACTCGGCAACTCA
AGAAGAAAACTAAAGAGAAAATAAAAAAAAAACAAGACGTCAATAAATAAAATCGAAATA
GAAGGATCTAGAATGTAGAAACCCTAACCCAATGGCTTCTATATAACGCTCGCTTTCACG
GGCTCTTTAGCCACACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTCTGTCTCTCGTT
CGCTTCCAAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGAACGGCAGGT
CGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGGCTGAGATCAACCAGTTGTT
GAGTTTGATCATCAACACCTTTTACAGCAACAAGGAGATCTTTCTTCGTGAGCTCATCAG
CAACTCCTCCGATGCATTGGATAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCT
AGATGCCCAACCAGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTC
TATTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTGGTACAAT
TGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCTGGGGCGGATGTGAGCAT
GATTGGTCAGTTTGGTGTTGGTTTCTACTCAGCTTACTTGGTTGCTGAGAAGGTTATTGT
TACCGCCAAGCACAACGATGATGAGCAGTACATCTGGGAGTCTCAGGCTGGTGGATCATT
CACTGTTACCAGGGACACTTCTGGTGAGCCTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCAACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATTTGATTAAGAA
GCACTCTGAGTTCATTAGTTACCCAATTTCCCTCTGGATTGAGAAGACCACTGAGAAGGA
GATTTCTGATGATGAGGACGAGGAAGAAAAGAAGGATGAGGAGGGTAAAGTTGAGGATGT
TGATGAAGAGAAAGAGAAGGAAGAGAAGAAGAAGAAGAAGATCAAGGAGGTGTCCCATGA
GTGGTCATTGGTGAACAAGCAGAAACCCATTTGGATGAGGAAACCCGAGGAGATTACAAA
AGAAGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACTGGGAGGAGCACTTGGCTGT
GAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTTTGTTCCCAAGAG
GGCACCTTTTGATCTCTTTGACACAAGGAAGAAGCCCAATAACATCAAGCTCTACGTCCG
CCGTGTCTTCATCATGGACAACTGTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAA
GGGTATTGTTGATTCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACGCTCCAGCAGAA
CAAGATCTTGAAGGTCATCCGCAAGAACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGA
GATTGCTGAGAACAAGGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAA
GCTTGGTATCCACGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGATACCA
TTCCACCAAGAGTGGTGATGAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGA
AGGCCAGAATGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCCC
ATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTTGATGCCATAGA
TGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAAGAAGCTTGTCTCAGCGACCAA
AGAAGGTCTCAAGCTTGATGAGAGTGAAGATGAGAAGAAGATGAAGGAAACCTTGAAGGA
GAAATTTGAGGGTCTCTGCAAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGT
TGTGGTGTCTGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGATG
GACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAACAGCATGGCTGG
TTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGAGAACCCCATCATGGAGGAGCT
CAGGAAGAGGGCTGATGCGGACAAGAATGACAAGTCTGTGAAGGACCTTGTCCTTCTGCT
CTTTGAGACTGCTCTCCTCACTTCTGGTTTCAGCCTTGATGACCCTAACACTTTCGGCAA
CAGAATCCACAGGATGTTGAAACTCGGGCTGAGCATCGAGGAGGATGCTGGTGATGCTGA
TGCTGACATGCCACCATTGGAGGATGCTGCTGACGATGCTGAGGGCAGCAAGATGGAGGA
AGTTGATTAAGAAGCTATAATAGTCTGATATACTAGTCTTTTTTCATGAAACTCTTTTAA
CTAGGTAGTTTCTTTTTGTTATGCGTTCTGTGGTGGTAGTACTGTGGGATTAGTGCTTTT
ATATTTTTATTTTCCCTCTTTGGTGGAGGTTTTGTTTTATTGTTTTGCAAATGCTTAAAA
AGTATGCTGTTTCCGAATCTATCTTATTTGATATAGTTATCTTAATGCGGCCAGTTTATA
TTCTTGGTAACATTGATTTTTAGTTTCTAACTTTGATTCAAGCATGTTATTGTTGCTCAT
GTGTAGCGCCGAGGGGGGCAATGTGCATCTTTGGATGCTTCAAAACTTGGGCCATTGGCC
TTGAACACAAACCATGTTTGCTAGCTGGTCTTATGCAAGTTCAAGACGCCTACTAGTGTA
GCAGGCTTTGCGTTTCTGTGGTCCCCATGGAGAGGCAGGGTAGCAGGGCATCATCGAAGA
ACTAAACTAGACAATGGTTTTCGATGCGAAATGGTGTAATTGGGTGAAATTGCATTGTTT
TTGTCATATTTGAGGTTTATTCATTCAATCTCTGTGTGGGATCATATTTGATTTTTTGTC
CGGCCTAAAGCATTAACATAGTGGTGTTTGATTAGAAGAAAAGTAAGTAATTGATGGTGT
TTGATTAGAAGAAAAGTAAGCAATTGAAGGGAGAGGAAAGTGAAAGAAAATAGAGACAAG
TATATTGAAATTTTTTTAAATGTTGATT