Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g06850.9
CDS Infomation

gene=Cs4g06850
Sequence

ATGGCCGAACGTGCTTTGACCCGCGTTCACAGTCTCCGCGAGCGTTTGGATGAGACTCTC
TCTGCCCACAGGAATGAAATCTTGGCCCTTTTGTCAAGGATTGAGGGCAAGGGCAAAGGA
ATCTTGCAAAACCATCAACTTATTGCTGAGTTTGAATCAATTTCTGAGGAAAACAGAAAG
CATCTAACTGAGGGTGCATTTGGTGAAGTTCTAAGAGCCACCCAGGAAGCAATTGTTTTG
CCTCCGTGGGTAGCGCTTGCCGTGCGTCCAAGGCCCGGTGTGTGGGAGTACATCCGAGTG
AATGTCCATGCCCTTGTCGTTGAGGAGCTGCTTGTAGCCGAGTACCTGCACTTCAAGGAG
GAACTTGTCGATGGAGGCTCCAATGGCAACTTCGTGCTTGAGTTGGATTTTGAGCCATTC
AATGCCTCGTTCCCTCGCCCAACTCTTTCAAAGTCTATTGGAAATGGTGTGGAATTCCTT
AACCGCCACCTTTCTGCGAAGCTCTTCCATGACAAGGAGAGCATGCATCCACTGCTTGAA
TTTCTCCGCGTCCACTGCCACAAGGGCAAAAACATGATGCTGAATGACAGAATTCAGAAC
TTGAATTCTCTTCAACATGTTCTGAGGAAGGCAGAGGAGTATCTGACCACAGTGGTACCA
GAAACGCCATTCTCTGAGTTGGCACTAAGATTTCAGGAGATTGGTTTGGAGAGAGGTTGG
GGTGATACTGCTGAGCGTGCACTTGAGATGATTCAGCTTCTTTTGGATCTTCTTGAGGCA
CCTGATCCGTGCACTCTTGAGACTTTCCTTGGCAGAATCCCCATGGTCTTTAATGTTGTG
ATCCTTACTCCCCACGGTTACTTTGCCCAAGACGATGTTTTGGGCTACCCTGATACTGGT
GGTCAGGTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGGATGAGATGCTTCTTCGT
ATCAAGCAGCAAGGACTTGATATCACCCCTCAAATCCTCATTATTACCCGTCTCCTCCCA
GATGCAGTAGGCACAACATGTGGTCAGCGACTTGAGAAAGTTTATGGAACTAAGTATTCA
GATATACTTCGAGTTCCCTTTAGAACTGAGAAGGGAGTTGTCCGCAAGTGGATCTCACGA
TTTGAAGTCTGGCCTTATCTAGAGACCTACACCGAGGATGTTGCTGTTGAAATTGCCAAA
GAGTTGCAGGGCAAGCCTGATCTAATCATTGGAAACTACAGTGATGGCAACATTGTTGCT
TCCTTGTTAGCACATAAACTAGGTGTTACCCAGTGTACTATTGCTCATGCTTTGGAGAAA
ACAAAATATCCAGATTCTGACATCTACTGGAAAAATTTGGATGACAAATACCACTTCTCA
TGCCAATTTACAGCTGATCTTATAGCCATGAATCACACTGACTTCATCATCACCAGTACC
TTCCAAGAGATTGCTGGAAGTAAGGACACTGTTGGTCAGTATGAGAGTCACACTGCTTTC
ACTCTTCCTGGACTCTACCGTGTTGTACATGGTATTGATGTGTTTGATCCCAAGTTCAAC
ATTGTATCTCCTGGTGCTGATATGAGCATTTACTTCCCCTACACTGAGGAGAAGAGAAGG
CTGAAGTCTTTCCATCCCGAGATTGAGGAGTTGCTTTACAGCGATGTTGAGAATAAGGAA
CACTTATGTGTGCTGAAAGACCGCAACAAGCCCATCCTGTTTACAATGGCAAGATTGGAC
CGTGTAAAGAATTTGACTGGGCTTGTGGAGTGGTATGGAAAGAATGCTAAGCTACGTGAG
TTGGTGAACTTAGTCGTAGTGGGTGGTGATAGGAGAAAGGAGTCCAAGGACTTGGAAGAA
CAGGCTGAAATGAAGAAGATGTATTCCCTCATTGATCAATACAAATTGAATGGCCAGTTC
CGATGGATCTCTTCTCAGATGAATCGGGTCAGGAACGGTGAATTGTACCGGTACATTTGT
GATACAAAGGGAGCTTTTGTGCAACCTGCACTGTATGAGGCCTTTGGCTTGACTGTTGTT
GAGGCCATGACCTGTGGATTGCCAACATTTGCAACTTGCAAGGGTGGCCCCGCTGAGATT
ATCGTTAACGGGAAATCTGGCTACCACATTGATCCTTACCATGGTGAGCAGGCTGCTGAG
ATCCTTGTTGACTTCTTTGAGAAGTGCAAGGCAGATCCCTCATACTGGGACAAGATATCA
CTGGGTGGCCTGAAGCGTATTGAAGAGAAGTATACATGGAAAATTTACTCTCAGAGGCTT
CTGACCCTGACTGGAGTCTATGGGTTCTGGAAACATGTATCTAACCTTGATCGGCTTGAG
AGCCGTCGATACCTTGAAATGTTTTATGCTCTCAAGTACCGTAAGCTGGTAAGCTTGTTG
ATCAATCCTTGA

Peptide Sequence

PEP ID

Cs4g06850.9
PEP Infomation
Sequence

MAERALTRVHSLRERLDETLSAHRNEILALLSRIEGKGKGILQNHQLIAEFESISEENRK
HLTEGAFGEVLRATQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELLVAEYLHFKE
ELVDGGSNGNFVLELDFEPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLE
FLRVHCHKGKNMMLNDRIQNLNSLQHVLRKAEEYLTTVVPETPFSELALRFQEIGLERGW
GDTAERALEMIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTG
GQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYS
DILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVA
SLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITST
FQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRR
LKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKNLTGLVEWYGKNAKLRE
LVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYIC
DTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAE
ILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLE
SRRYLEMFYALKYRKLVSLLINP*

Transcript Sequence

Transcript ID

Cs4g06850.9
Transcript Infomation

gene=Cs4g06850 CDS=748-3159
Sequence

CATTCTCTTCATTCTGTTTTTCCCGTCCGTACGTTTTTCTTGTTTCTTGTTTTCTCTAGG
CACTCTGTTTTTCTCTTCTTCCCATTCTTCTTCTTTTCGTTTAGTTTTGAATTCTTCTTC
GAGGTCGAGGATCGTGTTCAATGCTCTAGTCTATCCTGTTGAATTACTTGTTCATATTTT
ACGCTGATTGTATTTGACCACCTCTAGAAACGCAGCCTTAAAAAGAAGCTCCTCAGTTTC
ACTGTTGCCTTTGCTAGAATTTTCTCCCATGCTTTTGTTGGTGGAATACTAAAAAGAAAA
AGGATAAAGAAAAAAGAAAAGCTTTGATCCAAAATTTATCCCTGGTAGCCACACAAAGTG
GTAGTTCAATTATTATGCCTACGCTTTAAAGATTTTGGTAATATTATGTTTGGCACTATA
CTGGCCAACCAGCACATAAGTGAATATTCTTAACAAATTAAGACGCAATGTTAATTTTTA
AGACAGTAATATAAGTTGAACAATATAGACTCTTTGCGTAATTAATATTTTAAAGACTTG
GTTGTTGAAACTTGAAACTGGAGGTGGGGGTAGGTTTAGAAATTTTTCGTCTTCTAGATT
TTTTTATTTGACTATTCGGATTATCCATAATCCATTTCTTCTCTATATAATGAAGGTTGG
TTTTGGATAGACAGCTATATCTTTACGTTATTTACGTTTGCTTGGTTCCTTGTGTTGCAG
TTGAAGTTTTTGTTTGTCTGAGAATCAATGGCCGAACGTGCTTTGACCCGCGTTCACAGT
CTCCGCGAGCGTTTGGATGAGACTCTCTCTGCCCACAGGAATGAAATCTTGGCCCTTTTG
TCAAGGATTGAGGGCAAGGGCAAAGGAATCTTGCAAAACCATCAACTTATTGCTGAGTTT
GAATCAATTTCTGAGGAAAACAGAAAGCATCTAACTGAGGGTGCATTTGGTGAAGTTCTA
AGAGCCACCCAGGAAGCAATTGTTTTGCCTCCGTGGGTAGCGCTTGCCGTGCGTCCAAGG
CCCGGTGTGTGGGAGTACATCCGAGTGAATGTCCATGCCCTTGTCGTTGAGGAGCTGCTT
GTAGCCGAGTACCTGCACTTCAAGGAGGAACTTGTCGATGGAGGCTCCAATGGCAACTTC
GTGCTTGAGTTGGATTTTGAGCCATTCAATGCCTCGTTCCCTCGCCCAACTCTTTCAAAG
TCTATTGGAAATGGTGTGGAATTCCTTAACCGCCACCTTTCTGCGAAGCTCTTCCATGAC
AAGGAGAGCATGCATCCACTGCTTGAATTTCTCCGCGTCCACTGCCACAAGGGCAAAAAC
ATGATGCTGAATGACAGAATTCAGAACTTGAATTCTCTTCAACATGTTCTGAGGAAGGCA
GAGGAGTATCTGACCACAGTGGTACCAGAAACGCCATTCTCTGAGTTGGCACTAAGATTT
CAGGAGATTGGTTTGGAGAGAGGTTGGGGTGATACTGCTGAGCGTGCACTTGAGATGATT
CAGCTTCTTTTGGATCTTCTTGAGGCACCTGATCCGTGCACTCTTGAGACTTTCCTTGGC
AGAATCCCCATGGTCTTTAATGTTGTGATCCTTACTCCCCACGGTTACTTTGCCCAAGAC
GATGTTTTGGGCTACCCTGATACTGGTGGTCAGGTTGTTTACATCTTGGATCAAGTTCGT
GCCTTGGAGGATGAGATGCTTCTTCGTATCAAGCAGCAAGGACTTGATATCACCCCTCAA
ATCCTCATTATTACCCGTCTCCTCCCAGATGCAGTAGGCACAACATGTGGTCAGCGACTT
GAGAAAGTTTATGGAACTAAGTATTCAGATATACTTCGAGTTCCCTTTAGAACTGAGAAG
GGAGTTGTCCGCAAGTGGATCTCACGATTTGAAGTCTGGCCTTATCTAGAGACCTACACC
GAGGATGTTGCTGTTGAAATTGCCAAAGAGTTGCAGGGCAAGCCTGATCTAATCATTGGA
AACTACAGTGATGGCAACATTGTTGCTTCCTTGTTAGCACATAAACTAGGTGTTACCCAG
TGTACTATTGCTCATGCTTTGGAGAAAACAAAATATCCAGATTCTGACATCTACTGGAAA
AATTTGGATGACAAATACCACTTCTCATGCCAATTTACAGCTGATCTTATAGCCATGAAT
CACACTGACTTCATCATCACCAGTACCTTCCAAGAGATTGCTGGAAGTAAGGACACTGTT
GGTCAGTATGAGAGTCACACTGCTTTCACTCTTCCTGGACTCTACCGTGTTGTACATGGT
ATTGATGTGTTTGATCCCAAGTTCAACATTGTATCTCCTGGTGCTGATATGAGCATTTAC
TTCCCCTACACTGAGGAGAAGAGAAGGCTGAAGTCTTTCCATCCCGAGATTGAGGAGTTG
CTTTACAGCGATGTTGAGAATAAGGAACACTTATGTGTGCTGAAAGACCGCAACAAGCCC
ATCCTGTTTACAATGGCAAGATTGGACCGTGTAAAGAATTTGACTGGGCTTGTGGAGTGG
TATGGAAAGAATGCTAAGCTACGTGAGTTGGTGAACTTAGTCGTAGTGGGTGGTGATAGG
AGAAAGGAGTCCAAGGACTTGGAAGAACAGGCTGAAATGAAGAAGATGTATTCCCTCATT
GATCAATACAAATTGAATGGCCAGTTCCGATGGATCTCTTCTCAGATGAATCGGGTCAGG
AACGGTGAATTGTACCGGTACATTTGTGATACAAAGGGAGCTTTTGTGCAACCTGCACTG
TATGAGGCCTTTGGCTTGACTGTTGTTGAGGCCATGACCTGTGGATTGCCAACATTTGCA
ACTTGCAAGGGTGGCCCCGCTGAGATTATCGTTAACGGGAAATCTGGCTACCACATTGAT
CCTTACCATGGTGAGCAGGCTGCTGAGATCCTTGTTGACTTCTTTGAGAAGTGCAAGGCA
GATCCCTCATACTGGGACAAGATATCACTGGGTGGCCTGAAGCGTATTGAAGAGAAGTAT
ACATGGAAAATTTACTCTCAGAGGCTTCTGACCCTGACTGGAGTCTATGGGTTCTGGAAA
CATGTATCTAACCTTGATCGGCTTGAGAGCCGTCGATACCTTGAAATGTTTTATGCTCTC
AAGTACCGTAAGCTGGTAAGCTTGTTGATCAATCCTTGAGGCATCTTTTTTTCATGCTGA
ATCTGTTCCTCTGGCTGTGGAGTAAATGGACATTGAGGAAGCTCTCAGGGTGGTTGGTCC
GAGTGGAGATTTCTCGAGTTGTGGAGAATAATGTCCCTTCTGGGATTGCGATTGGACAAA
GACTTTTTTACCGGCTTAAATTTTCTTTTTTCAATTTTTTTTTTCCTTTTTGCATTTCTC
AGCATTGTTTGTACTTTGGGTGTTGCACCCTCATCAATTCCATTATAGTTTGTGACTTTT
TGGCCATCCTGTTGCTATTTTTCTTCCAATTGCTCAAGTCCCAAACTAACAACGCAACAA
CGTAAACTTAATAAGCAAATAAGTTAGT