Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g05530.1
CDS Infomation

gene=Cs4g05530
Sequence

ATGGAAACCAAGTGCGGTTGCTGGGCTTTTCTTAAACGCGGCGTTAGAGGTTCCTGCAAG
TCCTCTGCTTCTAATCACTCTGCTAACACTATTCCTCGTACTAGTCTTGTTTATGATGCA
GCTACTGAGACGCGATACTTGAATGCTAGTAATCGGGAGCTATGTGCTCCAAATGAAGCT
CACTTGTCCTCGGATAATCCTGATCCAGCTCCTACAGATGAAAAATCACCATGCCAGCTG
CTTCAGTTCACTTTTCAGGAGCTAAAATCAGCAACTGGAAATTTTAGGCCTGATAGTATT
CTTGGGGAGGGTGGATTTGGATATGTCTTCAAAGGATGGATTGAAGAAAATGGGACAGCT
CCGGCAAAACCCGGGTCGGGAATTACAGTTGCTGTTAAGAGCTTGAAGCCAGATGGTCTT
CAGGGCCATAGAGAATGGGTGGCTGAGGTTGACTTTCTTGGGCAGCTTCACCATCCTAAT
CTTGTTAAGCTTATTGGCTACTGCATTGAAGATGATCAGCGTCTGCTTGTTTATGAATTC
ATGACTCGTGGTAGTCTTGAAAATCATCTTTTTCGAAGGACTATACCTCTTCCTTGGTCC
AATAGAATTAAGATTGCACTTGGCGCTGCAAAAGGATTGGCCTTTTTACATGGTGGCTCA
GAACCAGTCATATACAGAGATTTTAAGACATCCAACATTTTGCTTGATTCGGAATATAAT
GCCAAACTTTCAGATTTTGGTCTTGCAAAAGCAGGCCCTCAAGGGGACAAAACACATGTT
TCTACTAGGGTTGTAGGAACATATGGCTATGCGGCTCCAGAGTATGTTATGACAGGACAC
CTGACGTCTAAGAGTGATGTTTACAGCTTTGGCGTAGTGCTGCTTGAGATTTTGACAGGC
AGAAGATCAATGGACAAGAAGCGTCCTAGTGGGGAACAAAATCTTGTTGCATGGGCTCGG
CAATATTTGGCTGACAAGCGAAAGCTTTATCAAATTGTTGATCCTCGTCTGGAGCTGAAT
TATTCCCTCAAAGGAGTTCAGAAAGTTTCTCAGTTAGCTTACAACTGCCTCAGTAGGGAC
CCCAAATCTCGCCCTTCAATGGATGAAGTTGTGAAGGTCCTCACTCCGTTGCAAGATCTC
AATGACCTTGCTATCTTGTCTTATCACTCTCGTTTATCTCAGCAAGGTAGACGCAAGAAA
AAACAAGACGGAACTCAACAGCTTGCAAGTGCACATTCTAAGAGCATCAGAGATTCTCCA
TTGAATACTGGCAAGCAGCGTTGTAGATGA

Peptide Sequence

PEP ID

Cs4g05530.1
PEP Infomation
Sequence

METKCGCWAFLKRGVRGSCKSSASNHSANTIPRTSLVYDAATETRYLNASNRELCAPNEA
HLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTA
PAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEF
MTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN
AKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG
RRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRD
PKSRPSMDEVVKVLTPLQDLNDLAILSYHSRLSQQGRRKKKQDGTQQLASAHSKSIRDSP
LNTGKQRCR*

Transcript Sequence

Transcript ID

Cs4g05530.1
Transcript Infomation

gene=Cs4g05530 CDS=306-1595
Sequence

TGATGATGCCTGCAATCTCCAACCAGCATCACCGTTTTTAACATTTAGCATTTTTTATTT
TTTATTTTTATTTTCTTCCTCTCTTTCTATCATTTCACTTCTTTTCTTTGCCTCTCACTT
CACTTCTCTTTTCTCTTTCTTCTTCTATTAAACCAATGGCCAGTCCCCTCCTCCTCCTCC
TCTTGTTTACACTTTGTTTTATCATGCAATTATATATGTAAATTACTACTACTCACTGCA
ACATGTAACGAAACATAGAAATTACAATTAACAAACGAATAAAAAAAATATTAATCTTTC
ATTTCATGGAAACCAAGTGCGGTTGCTGGGCTTTTCTTAAACGCGGCGTTAGAGGTTCCT
GCAAGTCCTCTGCTTCTAATCACTCTGCTAACACTATTCCTCGTACTAGTCTTGTTTATG
ATGCAGCTACTGAGACGCGATACTTGAATGCTAGTAATCGGGAGCTATGTGCTCCAAATG
AAGCTCACTTGTCCTCGGATAATCCTGATCCAGCTCCTACAGATGAAAAATCACCATGCC
AGCTGCTTCAGTTCACTTTTCAGGAGCTAAAATCAGCAACTGGAAATTTTAGGCCTGATA
GTATTCTTGGGGAGGGTGGATTTGGATATGTCTTCAAAGGATGGATTGAAGAAAATGGGA
CAGCTCCGGCAAAACCCGGGTCGGGAATTACAGTTGCTGTTAAGAGCTTGAAGCCAGATG
GTCTTCAGGGCCATAGAGAATGGGTGGCTGAGGTTGACTTTCTTGGGCAGCTTCACCATC
CTAATCTTGTTAAGCTTATTGGCTACTGCATTGAAGATGATCAGCGTCTGCTTGTTTATG
AATTCATGACTCGTGGTAGTCTTGAAAATCATCTTTTTCGAAGGACTATACCTCTTCCTT
GGTCCAATAGAATTAAGATTGCACTTGGCGCTGCAAAAGGATTGGCCTTTTTACATGGTG
GCTCAGAACCAGTCATATACAGAGATTTTAAGACATCCAACATTTTGCTTGATTCGGAAT
ATAATGCCAAACTTTCAGATTTTGGTCTTGCAAAAGCAGGCCCTCAAGGGGACAAAACAC
ATGTTTCTACTAGGGTTGTAGGAACATATGGCTATGCGGCTCCAGAGTATGTTATGACAG
GACACCTGACGTCTAAGAGTGATGTTTACAGCTTTGGCGTAGTGCTGCTTGAGATTTTGA
CAGGCAGAAGATCAATGGACAAGAAGCGTCCTAGTGGGGAACAAAATCTTGTTGCATGGG
CTCGGCAATATTTGGCTGACAAGCGAAAGCTTTATCAAATTGTTGATCCTCGTCTGGAGC
TGAATTATTCCCTCAAAGGAGTTCAGAAAGTTTCTCAGTTAGCTTACAACTGCCTCAGTA
GGGACCCCAAATCTCGCCCTTCAATGGATGAAGTTGTGAAGGTCCTCACTCCGTTGCAAG
ATCTCAATGACCTTGCTATCTTGTCTTATCACTCTCGTTTATCTCAGCAAGGTAGACGCA
AGAAAAAACAAGACGGAACTCAACAGCTTGCAAGTGCACATTCTAAGAGCATCAGAGATT
CTCCATTGAATACTGGCAAGCAGCGTTGTAGATGATATGCTGTCATATCCTCTCCCTGAT
TGCCTCAACTATTATATGGATTGAGGTTGCAATGCCACTTTTATTACAGGGGTTGTGTGA
AGACAGTATGTAAGGCTTGTAGTATAATTTTTGGGTGTTTTGATATTTTCTAGAGCCAGA
AGTGTATGGAAGAGGAAAGGCACATCTTCCTTTTCTCTGAAACCTCAGATTAGGGTGCTA
ACAATCAATGGGAAAGTGCCTTGCGATTTTACTGTGTTGCAATTGAGATATATTTTGTAA
TTAGATTAAACGTCCCATTTCCAAGAATGTGATTTGCCGTCATCTGATTGTCAAATGCTT
TGAGTTTCTAGGCATTGATGATATGCATTTTTCAAGAAAAACAAAATTTTACCA