Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g03460.1
CDS Infomation

gene=Cs4g03460
Sequence

ATGTCGTGCCTAGCACTCTCGCTACAACCCGTAAACGGATCCGATATCCTCCTCCAAACC
CGAGAATGGTTCCCGCCGACCCGAGCGCTTGCCGCCCTCTCCGCCTTCCGCCAAACCCGC
GAAGTCTTCGCCGCCACCAAACGCCTCAACCCCAACCCCCAACATCAATCCCCTGCCAAC
ATCTCCGCCGATTCGGAAAGCGCCCTCGAATCCATCGCCTCCCTCGGTGACGACCCCCTC
GCCGCCTCAAGCGGCCAGCTCATAGTCGGTGTCGAGTCCCGCTATCGCGTCGTCTACCGA
CTCGTCAACTCCATCTACGTCCTCGGCATCACCAACGCCGATCACGATAACTCCATCAAT
GTCTTCGAGTGCATCAACATCGTTAACCAAGCCGTTAGCGTCATCGTAACGGCGTGCCGC
GGCGTTGACGTCACTCCTGAGAAACTCAACCGTAAGTACGCCGAAATTTACATGGCGCTC
GATATCGTCCTACGTGGCGTCAGTAGTATTCGCTTGGCGGCAATGTTGGGTTCGATGCAC
GGAGACGGGATTGCGAAGATGGTTCACTCTGCTTTGGATACGGAGGCCAAGATTCGTGGA
GCGGATCAGTGGAATTCACTTGAAATTCATTCGATTGAGCATCAAGCCGCTGTTGATTCT
TTCTCTCACGCGACATTTGAGGTTCCAGCTGAGACGCTGGCAGCAGGTGATGAGGTGGCA
GCGACGCTTGTTGTACAAACGGCAGCCGAGCAAGATAAAGAGCAAGAGAAGTCAGAGGAA
TCACCTACCGAGAAAGACCCGTTTGCAGCAAGCGAAGCTATAAATAAGGAGCCGGAATTG
GTGGGTGGTTTTAAGAAGAATAAGGATTCAAGCAATGATTTAACGGTGGCGTTGGCGGGA
ATTGAAGTTACCACATTGCCTCCGGCTGAGGCTACTCAGTCGACGCACATTAATGTTGAG
GGTTTTGAAGGTGAGTATGGTGGAATTGAGTTTAGTAATGACCAGGCTACTATGGAGGAG
ACTTTTGAAGGGTTTAGTGATGCCTGGGGTGGAGGATTGGATGCTTCTGAGTTCGTTGGT
CCCAAAAAGATTGCGAAAAAGGAAGGTCTTAGTGGACTTGAATTGTTGCAAACAGGGCCT
GATGCTCCGGCCCCTTCATCAAAGGATGGTGCAGGTACTCCACTCGATAATCTCGTGAAA
AGGACAGAAATGAAGGGTCCTGAGATGTATATTGTTGAGCAAGTTAATGCAGAGTTTAGG
GAATCATTGCTTGCTAGAGTAGGGTTGATGGGTGCCGTTTATTTGAGAACAATGCCTAAG
AAAACCTCAGGGGATGATAAAGATACTGAATTTTCATTTAGGGTGGAGGGTACAAGTGCT
GTTAAGAGATTTGCTGTGCAGAGTTCAAAAGTTAGTAGTTTAGGTGATGGCATGTTTCAT
GTGAGAACAGCTCCTTCTGATGAACCTATTCCCATTTTGAGGTATAGTTTGCTTCCTAGG
TTAACGCCATTGCCTTTAAGAGTTCGGTTGATTAAAAGACATAGTGGAACTTTGCTTTCT
GTGATGGTACAATATGTTTCCAACCCTGATTTGCCCATGCCGTTAAATGATGTAACATTT
TCCTTGAAACTCCCGGTTGATCCTACATTGTTGAAGGTTTCGCCTAAAGCTGTGTTGAAT
AGGTCTGATAGAGAATTGAAATGGATTGTGCCAGAGATACCTGTAAAGGGTGCTCCTGGA
AAATTGAGAGTGAGGATGCCCGTGGATTCAAGTGAGGAAGATGGTGGGGAAGAGATTGAC
GTTGTCTGCCATGTGAAATTTGCTTCACAAGGAATGCTATCATTATCTGGGGTCTGTCTA
CGGCCTGCTACTGAAGGTAAGACGGACTTTTATGAGGTTGGTCACAAGTATGAGAGTGGG
GTTTATATATGCAATTAA

Peptide Sequence

PEP ID

Cs4g03460.1
PEP Infomation
Sequence

MSCLALSLQPVNGSDILLQTREWFPPTRALAALSAFRQTREVFAATKRLNPNPQHQSPAN
ISADSESALESIASLGDDPLAASSGQLIVGVESRYRVVYRLVNSIYVLGITNADHDNSIN
VFECINIVNQAVSVIVTACRGVDVTPEKLNRKYAEIYMALDIVLRGVSSIRLAAMLGSMH
GDGIAKMVHSALDTEAKIRGADQWNSLEIHSIEHQAAVDSFSHATFEVPAETLAAGDEVA
ATLVVQTAAEQDKEQEKSEESPTEKDPFAASEAINKEPELVGGFKKNKDSSNDLTVALAG
IEVTTLPPAEATQSTHINVEGFEGEYGGIEFSNDQATMEETFEGFSDAWGGGLDASEFVG
PKKIAKKEGLSGLELLQTGPDAPAPSSKDGAGTPLDNLVKRTEMKGPEMYIVEQVNAEFR
ESLLARVGLMGAVYLRTMPKKTSGDDKDTEFSFRVEGTSAVKRFAVQSSKVSSLGDGMFH
VRTAPSDEPIPILRYSLLPRLTPLPLRVRLIKRHSGTLLSVMVQYVSNPDLPMPLNDVTF
SLKLPVDPTLLKVSPKAVLNRSDRELKWIVPEIPVKGAPGKLRVRMPVDSSEEDGGEEID
VVCHVKFASQGMLSLSGVCLRPATEGKTDFYEVGHKYESGVYICN*

Transcript Sequence

Transcript ID

Cs4g03460.1
Transcript Infomation

gene=Cs4g03460 CDS=234-2171
Sequence

CCAAACTAGAAGCCCATCAATTTGAGTTTCGGCCCATAGCCACTCCCTCAGCGCCAGTCA
TCAGCAGCCTCGCTCGCTGTCTCTCTCGATCTCGATTCATTTCTGCAACCAGAAAAAAGA
TCAAATCAAATTCCTCCATACCATCGCTGCGCAATGTTGCTATCACACCTCGGTCACTAC
CTATAAACTTGTTATTTACTATAGCTCACTCGTTAGATCCGATCCGATCCGAAATGTCGT
GCCTAGCACTCTCGCTACAACCCGTAAACGGATCCGATATCCTCCTCCAAACCCGAGAAT
GGTTCCCGCCGACCCGAGCGCTTGCCGCCCTCTCCGCCTTCCGCCAAACCCGCGAAGTCT
TCGCCGCCACCAAACGCCTCAACCCCAACCCCCAACATCAATCCCCTGCCAACATCTCCG
CCGATTCGGAAAGCGCCCTCGAATCCATCGCCTCCCTCGGTGACGACCCCCTCGCCGCCT
CAAGCGGCCAGCTCATAGTCGGTGTCGAGTCCCGCTATCGCGTCGTCTACCGACTCGTCA
ACTCCATCTACGTCCTCGGCATCACCAACGCCGATCACGATAACTCCATCAATGTCTTCG
AGTGCATCAACATCGTTAACCAAGCCGTTAGCGTCATCGTAACGGCGTGCCGCGGCGTTG
ACGTCACTCCTGAGAAACTCAACCGTAAGTACGCCGAAATTTACATGGCGCTCGATATCG
TCCTACGTGGCGTCAGTAGTATTCGCTTGGCGGCAATGTTGGGTTCGATGCACGGAGACG
GGATTGCGAAGATGGTTCACTCTGCTTTGGATACGGAGGCCAAGATTCGTGGAGCGGATC
AGTGGAATTCACTTGAAATTCATTCGATTGAGCATCAAGCCGCTGTTGATTCTTTCTCTC
ACGCGACATTTGAGGTTCCAGCTGAGACGCTGGCAGCAGGTGATGAGGTGGCAGCGACGC
TTGTTGTACAAACGGCAGCCGAGCAAGATAAAGAGCAAGAGAAGTCAGAGGAATCACCTA
CCGAGAAAGACCCGTTTGCAGCAAGCGAAGCTATAAATAAGGAGCCGGAATTGGTGGGTG
GTTTTAAGAAGAATAAGGATTCAAGCAATGATTTAACGGTGGCGTTGGCGGGAATTGAAG
TTACCACATTGCCTCCGGCTGAGGCTACTCAGTCGACGCACATTAATGTTGAGGGTTTTG
AAGGTGAGTATGGTGGAATTGAGTTTAGTAATGACCAGGCTACTATGGAGGAGACTTTTG
AAGGGTTTAGTGATGCCTGGGGTGGAGGATTGGATGCTTCTGAGTTCGTTGGTCCCAAAA
AGATTGCGAAAAAGGAAGGTCTTAGTGGACTTGAATTGTTGCAAACAGGGCCTGATGCTC
CGGCCCCTTCATCAAAGGATGGTGCAGGTACTCCACTCGATAATCTCGTGAAAAGGACAG
AAATGAAGGGTCCTGAGATGTATATTGTTGAGCAAGTTAATGCAGAGTTTAGGGAATCAT
TGCTTGCTAGAGTAGGGTTGATGGGTGCCGTTTATTTGAGAACAATGCCTAAGAAAACCT
CAGGGGATGATAAAGATACTGAATTTTCATTTAGGGTGGAGGGTACAAGTGCTGTTAAGA
GATTTGCTGTGCAGAGTTCAAAAGTTAGTAGTTTAGGTGATGGCATGTTTCATGTGAGAA
CAGCTCCTTCTGATGAACCTATTCCCATTTTGAGGTATAGTTTGCTTCCTAGGTTAACGC
CATTGCCTTTAAGAGTTCGGTTGATTAAAAGACATAGTGGAACTTTGCTTTCTGTGATGG
TACAATATGTTTCCAACCCTGATTTGCCCATGCCGTTAAATGATGTAACATTTTCCTTGA
AACTCCCGGTTGATCCTACATTGTTGAAGGTTTCGCCTAAAGCTGTGTTGAATAGGTCTG
ATAGAGAATTGAAATGGATTGTGCCAGAGATACCTGTAAAGGGTGCTCCTGGAAAATTGA
GAGTGAGGATGCCCGTGGATTCAAGTGAGGAAGATGGTGGGGAAGAGATTGACGTTGTCT
GCCATGTGAAATTTGCTTCACAAGGAATGCTATCATTATCTGGGGTCTGTCTACGGCCTG
CTACTGAAGGTAAGACGGACTTTTATGAGGTTGGTCACAAGTATGAGAGTGGGGTTTATA
TATGCAATTAATTTGTGATTAGGTGGCTTCTGCTTAGCAACTGTTGGTTTTCATTTTCTA
TTTGTATTTTTCTTGTCTGTGAGGGGACGTCAAGTGAGTATGTGATTTGGGTTTTACTTG
TAGCCTTTTTTGACGCTGAGCCTGTAATTTAGATCAACATTTATGTGAAACAATGTCTCT
TTTTGTAATCAGTTCATGTTCTTCATTAATGGATTGTATATGTTGTTCTCTATGTTGAAG
TTTATGATTTCAATTTTAGTTG