Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs4g01490.2
CDS Infomation

gene=Cs4g01490
Sequence

ATGGCTGGCAATGGTATTTTTGCTGAGATTTTAGATGGGGACGTGTTCAAGTACTATGCT
GATGGCGAATGGAAGAAGTCTAATTCTGGCAAAAGCGTTCCCATTGTCAACCCCACTACT
CGCAGAACTCACTACAAAGTTCAGGCTTGTTCACAAGAGGAGGTGAACAAGGTAATGGAA
GCAGCAAAAGCTGCACAAAAATTATGGGCAAAGACTCCGCTTTGGAAGAGAGCTGAGCTC
CTGCACAAGGCTGCTGCAATTCTCAAAGAGCACAAGGCCCCCATTGCTGAGTGTTTGGTT
AAAGAAATTGCAAAGCCAGCTAAAGATGCTGTCACTGAGGTTATAAGGTCTGGAGATTTG
GTCTCTTATTGTGCCGAAGAGGGTGTTCGGATTCTCGGAGAAGGGAAGTTTTTGGTGTCT
GATAGCTTCCCCGGAAATGAGAGGACTAAGTATTGTCTCACTTCAAAGGGTGCTGTTGCT
GCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTTTCCTAAAGGCCTTATAAGCTGT
GTCACCGGGAAAGGTTCTGAGATTGGTGATTTCCTTACTATGCATCCTGCAGTGAACTGT
ATAAGCTTCACTGGTGGAGACACTGGAATTTCAATCTCGAAGAAGGCTGGAATGATCCCT
CTTCAGATGGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCTGACCTTGAT
TTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAAAGATGCACTGCA
GTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTCCCTGGTCGAGAAGGTTAAGGCT
AAAGTGGTGAAACTGACAGTTGGCCCTCCTGAAGAAAACTGTGATATCACTCCAGTTGTG
TCGGAATCATCTGCAAATTTCATTGAAGGGCTGGTTATGGATGCCAAACAGAAAGGAGCA
ACATTCTGTCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTGCTTGACAAT
GTTAGGCCTGATATGAGGATCGCATGGGAGGAGCCATTTGGACCGGTTCTGCCTGTTATC
AGGATTGGCTCTGTTGAGGAAGGTATTCACCACTGCAATGCTAGCAACTTTGGACTTCAG
GGCTGTGTATTTACAAAGGACATTAACAAAGCAATGTTGATCAGCGATGCAATGGAGACA
GGAACCGTCCAGATCAACTCTGCCCCAGCTCGTGGACCAGATCATTTTCCTTTCCAGGGT
TTTAAGGACAGTGGAATTGGCTCACAAGGTATTACCAACAGCATCAACATGATGACTAAG
GTCAAAAGCACTGTTATCAATTTGCCAAGTCCTTCTTATACCATGGGTTAA

Peptide Sequence

PEP ID

Cs4g01490.2
PEP Infomation
Sequence

MAGNGIFAEILDGDVFKYYADGEWKKSNSGKSVPIVNPTTRRTHYKVQACSQEEVNKVME
AAKAAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVIRSGDL
VSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKGAVAALHMVHCFHLAGFPKGLISC
VTGKGSEIGDFLTMHPAVNCISFTGGDTGISISKKAGMIPLQMELGGKDACIVLEDADLD
LVAANIIKGGFSYSGQRCTAVKVVLVMESVADSLVEKVKAKVVKLTVGPPEENCDITPVV
SESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVI
RIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQG
FKDSGIGSQGITNSINMMTKVKSTVINLPSPSYTMG*

Transcript Sequence

Transcript ID

Cs4g01490.2
Transcript Infomation

gene=Cs4g01490 CDS=310-1680
Sequence

CTTTGTTCTGTATACGTAGAGCAGAGACAAGAGAAATAAAGCATGTGCAACTCAAGTGAC
CGACTAACTTTCAATTTATAACCGTAGAGCGAAGCAAATTAATTTAAGGGTGCACCTACA
ATTGGCTCACTTGGCATGTTATGAACCACCTGCTGAACCAAACAAAGCATGTATGGCTCA
GCTTTTCCCTATATATATACACATATATGTCTAACAACCAACTCTCACCAGACACTCCCC
ACTCTCATCTTCAGTCTTCACTTGACCTTCTTCAACTAGTTTACTCTGTTGGGTGGTTCA
TTGTGAGAAATGGCTGGCAATGGTATTTTTGCTGAGATTTTAGATGGGGACGTGTTCAAG
TACTATGCTGATGGCGAATGGAAGAAGTCTAATTCTGGCAAAAGCGTTCCCATTGTCAAC
CCCACTACTCGCAGAACTCACTACAAAGTTCAGGCTTGTTCACAAGAGGAGGTGAACAAG
GTAATGGAAGCAGCAAAAGCTGCACAAAAATTATGGGCAAAGACTCCGCTTTGGAAGAGA
GCTGAGCTCCTGCACAAGGCTGCTGCAATTCTCAAAGAGCACAAGGCCCCCATTGCTGAG
TGTTTGGTTAAAGAAATTGCAAAGCCAGCTAAAGATGCTGTCACTGAGGTTATAAGGTCT
GGAGATTTGGTCTCTTATTGTGCCGAAGAGGGTGTTCGGATTCTCGGAGAAGGGAAGTTT
TTGGTGTCTGATAGCTTCCCCGGAAATGAGAGGACTAAGTATTGTCTCACTTCAAAGGGT
GCTGTTGCTGCGCTTCACATGGTGCATTGCTTTCACTTGGCTGGTTTTCCTAAAGGCCTT
ATAAGCTGTGTCACCGGGAAAGGTTCTGAGATTGGTGATTTCCTTACTATGCATCCTGCA
GTGAACTGTATAAGCTTCACTGGTGGAGACACTGGAATTTCAATCTCGAAGAAGGCTGGA
ATGATCCCTCTTCAGATGGAGTTGGGAGGCAAAGATGCTTGTATCGTGCTTGAGGATGCT
GACCTTGATTTGGTTGCCGCAAACATAATAAAAGGAGGATTTTCTTACAGTGGTCAAAGA
TGCACTGCAGTTAAGGTTGTCTTGGTGATGGAATCTGTAGCAGATTCCCTGGTCGAGAAG
GTTAAGGCTAAAGTGGTGAAACTGACAGTTGGCCCTCCTGAAGAAAACTGTGATATCACT
CCAGTTGTGTCGGAATCATCTGCAAATTTCATTGAAGGGCTGGTTATGGATGCCAAACAG
AAAGGAGCAACATTCTGTCAAGAGTACAGGAGAGAAGGCAACCTCATCTGGCCCTTGTTG
CTTGACAATGTTAGGCCTGATATGAGGATCGCATGGGAGGAGCCATTTGGACCGGTTCTG
CCTGTTATCAGGATTGGCTCTGTTGAGGAAGGTATTCACCACTGCAATGCTAGCAACTTT
GGACTTCAGGGCTGTGTATTTACAAAGGACATTAACAAAGCAATGTTGATCAGCGATGCA
ATGGAGACAGGAACCGTCCAGATCAACTCTGCCCCAGCTCGTGGACCAGATCATTTTCCT
TTCCAGGGTTTTAAGGACAGTGGAATTGGCTCACAAGGTATTACCAACAGCATCAACATG
ATGACTAAGGTCAAAAGCACTGTTATCAATTTGCCAAGTCCTTCTTATACCATGGGTTAA
TTCAAGTATAATTAAGCTATTAGGAAACAGTTAAGAACGAACGGTATTTTTGTTTAGGTA
TAATAACTAGCGATGAAGAGGGATGAGTTTTATCTGCAGAATTGTATTATGTATCTGCCT
TTCTAGTACTTCACGCTTTGCAGATGATAAATAATGGAGATATGTGCATCAACATATATG
TAATATGTGAGACAGAACGCAATAGTTTCATGTTAAATTGTGGAAGTGGGTACTTATGGT
ACGTGCACTTGTGATTAAATATTAAAGACCTTGAAAAAAAAGAATGCCGTAGCTGGAGAA
TGTTATAGCAAGATCCGTATGGCTTTCCTTG