Gene sequences

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SNP Detection
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Trait-Related Loci

Citrus sinensis

CDS Sequence

CDS ID	Cs3g27840.8
CDS Infomation	gene=Cs3g27840
Sequence	ATGGACTCGGATTTCGGTATTCCGAGAGAACTCTCCGGCCTTCAACAACTCCGATCTCTT TACCAGCCCGAGCTCCCTCCTTGCCTTCAGGGAACTACTGTCAGGGTGGAATTTGGTGAT TCAACTACAACTGCTGACCCAGCTGATACCCATTCCATTAGCCGATCCTTTCCTCACACT TACGGTCAGCCTTTGGCTCACTTTCTTAGAGCAACTGCCAAAGTACCTGATGCTCAAATT ATAACTGAGCATCCTGCTATTAGGGTGGGAATTGTCTTCTGTGGAAGACAATCTCCTGGT GGACACAATGTCGTTTGGGGCCTTTACGATGCGCTCAAGCTACACAACCCTAAGAGTACT TTGCTTGGATTTTTGGGTGGTTCTGAAGGTTTATTTGCACAGAAAACTCTTGAGGTCACA AAAGAAATTCTTTCAACCTACAAAAATCAAGGTGGTTATGACATGCTGGGACGCACAAAA GATCAAATCAGAACAACAGAGCAAGTCAATGCTGCACTAACTGCATGCAAAAATTTGAAC TTGGATGGCCTTGTCATTATTGGAGGGGTCACATCAAACACAGATGCTGCATACCTTGCT GAAACATTTGCTGAAGCAAAATGCCCAACAAAGGTGGTTGGTGTTCCTGTTACTTTGAAT GGAGATCTCAAGAATCAATTTGTGGAAACCAATGTTGGTTTTGATACAATATGCAAGGTC AATTCACAACTGATCAGTAATGTGTGCACTGATGCTCTCTCTGCAGAGAAGTATTATTAT TTTATTCGTCTGATGGGTAGGAGGGCATCACATGTTGCTTTGGAATGCACCCTTCAGTCT CATCCGAATATGGTAATTCTAGGTGAGGAAGTGGCTGCTTCAAAGCTTACTCTGTTTGAT CTAACGAAACAAATTTGTGATGCTGTTCAAGCCAGAGCAGAACAAGACAAGAACCATGGG GTCATCCTGCTGCCAGAAGGGCTCATAGAAAGCATTCCTGAAGTATATGCTCTATTGAAG GAAATTCACAGTTTGCTGAGGCAAGGAGTTCCTGTTGATAACATTTCTTCTCAACTTTCA CCCTGGGCGTCTGCTTTGTTTGAATTTTTACCACCCTTCATCAAGAAACAGCTTCTTCTT CAACCCGAGTCAGATGATTCTGCACAATTATCCCAGATTGAGACGGAGAAACTTCTTGCA CATCTTGTGGAAGTTGAAATGAACAAGCGCCTGAAAGAGGGCACGTACAAGGGTAAAAAG TTCAATGCAATCTGCCACTTTTTCGGTTATCAGGCTCGTGGATCATTGCCATCGAAATTC GACTGTGACTATGCCTACGTTCTTGGACACATCTGCTACCATATTCTTGCTGCTGGTTTG AATGGTTACATGGCTACTGTGACTAATCTTAAGAATCCTGCGAACAAGTGGCGTTGTGGT GCTGCTCCAATTACAGTTAGGTTTTCATTCTTTTCAATTGTATAG

Peptide Sequence

PEP ID	Cs3g27840.8
PEP Infomation
Sequence	MDSDFGIPRELSGLQQLRSLYQPELPPCLQGTTVRVEFGDSTTTADPADTHSISRSFPHT YGQPLAHFLRATAKVPDAQIITEHPAIRVGIVFCGRQSPGGHNVVWGLYDALKLHNPKST LLGFLGGSEGLFAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLN LDGLVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKV NSQLISNVCTDALSAEKYYYFIRLMGRRASHVALECTLQSHPNMVILGEEVAASKLTLFD LTKQICDAVQARAEQDKNHGVILLPEGLIESIPEVYALLKEIHSLLRQGVPVDNISSQLS PWASALFEFLPPFIKKQLLLQPESDDSAQLSQIETEKLLAHLVEVEMNKRLKEGTYKGKK FNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKNPANKWRCG AAPITVRFSFFSIV*

Transcript Sequence

Transcript ID	Cs3g27840.8
Transcript Infomation	gene=Cs3g27840 CDS=217-1701
Sequence	AGAACACAAGTTCTCCTAAAGCCCGTGGGCTTGGTTGGTAGTATCGCCGGTCCCACTTAT CCACCCCTATAAAAGCTTAAAAAGAGCCTTTTAAGGCCGTAACAAACCAAACAAAAACCC CAATCAGTATAGTAGTACTGCATACAACACAGTCAATACCAAATACCAAAAAAAACGCAA CAAACAGTAATAACCATCCACTGAAACGAAAACACAATGGACTCGGATTTCGGTATTCCG AGAGAACTCTCCGGCCTTCAACAACTCCGATCTCTTTACCAGCCCGAGCTCCCTCCTTGC CTTCAGGGAACTACTGTCAGGGTGGAATTTGGTGATTCAACTACAACTGCTGACCCAGCT GATACCCATTCCATTAGCCGATCCTTTCCTCACACTTACGGTCAGCCTTTGGCTCACTTT CTTAGAGCAACTGCCAAAGTACCTGATGCTCAAATTATAACTGAGCATCCTGCTATTAGG GTGGGAATTGTCTTCTGTGGAAGACAATCTCCTGGTGGACACAATGTCGTTTGGGGCCTT TACGATGCGCTCAAGCTACACAACCCTAAGAGTACTTTGCTTGGATTTTTGGGTGGTTCT GAAGGTTTATTTGCACAGAAAACTCTTGAGGTCACAAAAGAAATTCTTTCAACCTACAAA AATCAAGGTGGTTATGACATGCTGGGACGCACAAAAGATCAAATCAGAACAACAGAGCAA GTCAATGCTGCACTAACTGCATGCAAAAATTTGAACTTGGATGGCCTTGTCATTATTGGA GGGGTCACATCAAACACAGATGCTGCATACCTTGCTGAAACATTTGCTGAAGCAAAATGC CCAACAAAGGTGGTTGGTGTTCCTGTTACTTTGAATGGAGATCTCAAGAATCAATTTGTG GAAACCAATGTTGGTTTTGATACAATATGCAAGGTCAATTCACAACTGATCAGTAATGTG TGCACTGATGCTCTCTCTGCAGAGAAGTATTATTATTTTATTCGTCTGATGGGTAGGAGG GCATCACATGTTGCTTTGGAATGCACCCTTCAGTCTCATCCGAATATGGTAATTCTAGGT GAGGAAGTGGCTGCTTCAAAGCTTACTCTGTTTGATCTAACGAAACAAATTTGTGATGCT GTTCAAGCCAGAGCAGAACAAGACAAGAACCATGGGGTCATCCTGCTGCCAGAAGGGCTC ATAGAAAGCATTCCTGAAGTATATGCTCTATTGAAGGAAATTCACAGTTTGCTGAGGCAA GGAGTTCCTGTTGATAACATTTCTTCTCAACTTTCACCCTGGGCGTCTGCTTTGTTTGAA TTTTTACCACCCTTCATCAAGAAACAGCTTCTTCTTCAACCCGAGTCAGATGATTCTGCA CAATTATCCCAGATTGAGACGGAGAAACTTCTTGCACATCTTGTGGAAGTTGAAATGAAC AAGCGCCTGAAAGAGGGCACGTACAAGGGTAAAAAGTTCAATGCAATCTGCCACTTTTTC GGTTATCAGGCTCGTGGATCATTGCCATCGAAATTCGACTGTGACTATGCCTACGTTCTT GGACACATCTGCTACCATATTCTTGCTGCTGGTTTGAATGGTTACATGGCTACTGTGACT AATCTTAAGAATCCTGCGAACAAGTGGCGTTGTGGTGCTGCTCCAATTACAGTTAGGTTT TCATTCTTTTCAATTGTATAGTTTGTCTCGTTCAAATGGAGCTCAAATATTTTAGTTTTC CTCATCCTTTTGTAAGGCGACTTGTTGAATTCTTTTGCTACTTTTGCTACTTTTGCTAAA CCTCAGTCAATGATGACTGTAAAACGTTGGTCTCAAAATCCGGGTGCTTCTTCAATTGGA CGACCGGCTATTAACCCCGCTACTGTGGATATGAGAGGCAAAGCTTATGAGTAAGTCCCT TTTCACTGTCCAAATTTTGCATGTTTAAGATGCTTCTTGTGACTGAAGAAAATGAGAACA AGTACAGAATTTTAATGATGAAATAATTACATGGGGTGAAGTCATGTTTGCTGTAATTCT CTCTCTTTCTGTCATACACAAATACACAAACACACAAACAATGGGGATACAAGTTCAATG GCAACTTTGATTTTATCTACTGTATGGTGTTGGTTGCAGGCTCTTGAGACAAAATGCAAC AAGATTCTTGTTGGACGACCTCTACAGAAATCCTGGACCCGTTCAGTTTGATGGTCCTGG TGCAGATGCTAAGGCTGTAACTCTGTGTGTTGAAGACCGGGATTACATGGGCCGTATTAA GGAACTGCAGAAGTATCTAGACGAGGTGCTTAAATCTTGTTATTTCTTTGTTCTTTATGT TCTTATATATGTGTGTGTGCGCGCGCGCGACATATCTTTCAAATTTTCATCTTTTATTTG AGCTTTATGATGTGTGTGCTCGTGCAATTGTGGATTCCACTTAGTGTTTCCTTGTTTTTT TTTTTTCTTTTTCCAATTTATTTCCTAGGTTCGAACCATAGTGAAACCAGGTTGTTCACA AGAGGTACTGAAAGCAGCTTTGAGTGTTATGGCTTCTGTGACGGAAGTTCTCTCAGCAAT GTCTGCATCTGGAGGCCAGACAACACTTTAAGACGAAGTTGGCTGATTATGCTTTGCTTT CTTCTTTAAGACAACTTAGCTGATTATGCTTGCTTTCTTCTTCTTTTGCCAAGCCATTTA CTGTGTATTGGTAGTAATGAATTGAGTTCATTCTCTTTTGTTATTCTATCCAGTGTTACA TTTTTGTCCGATATAGATAATAACTAGAGAGGTATGCATTGCAAGTTTTTGGAAGATCAA AATTTTTCCAGCGGTTTAAATCCTCAGTGCATCAATATGGCAATCAAAGATTCTTATAGA TTCTTACTGGCTACGGTGACTGGATGTAGCCAAGCCAATACTAGCTTTTCTATTTTTTGA GATACCCGTTAAAGAAATCAATCGCTGTTACTGAAGAATAATTTGCGAGTTTTTTTAGTG CCATTTTTCCGTAATGAACGTGAAATTTGTCTTATATTTTGATCATTGCACCTTTTTGCT CAGGAACAAACTTCGGCTCGATTGTTCTAGTGTTTTTATATCAATCAAACATTGAATTTT CAGGTTCTTTACCGAAAAAGAGAAAAGTTACCTACCAGTGTCAGCCCGACTTCCTGAGGC GGAAATTTTATATGCACAAAAGCAAATTTATGTGAAACACAGAAAATACCAACTGGGTAG ATGAAATAGAAAATCAGCCTGATCAAGTCTTCTTCTCTTTGTCACTGCGTCTGCTCTCAA TCTTCCCGTTGGAGGAATGATCCAGGGTTTAGGTTTGGTTAGGGTCAGGTATGCGATTGT CTATTCTACTTAGTTGAAGGAATTTAAAAAGTATTTTCTTCGTTCGTTTTTCCTTTGAAC CGTCCTCTGCTGTCTAAATTGAAGTTGTTACTTTTTGACGCATACTGAAGGCATACTGCT GTACTGTATTCTTTAATCAGATTCAGATGTTC