Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs3g27660.1
CDS Infomation

gene=Cs3g27660
Sequence

ATGGCGTTGAAAGTGCTCTCAGCGCTAGACTCAGCAAAGACCCAGTACTATCACTTCAAA
GCCATAATAATAGCCGGGATGGGGCTCTTTACCGATGCCTATGACCTCTTCTGTATCCCG
CCCATCATGAAGCTCCTCGGAAGAATCTACTACAGCGATGGCGCCGATCGATTCCAAATC
CCAAACGCGGTCGTATCGCCGATGTTAGCCCTGGCTTTACTGGGCACGGTGATAGGGCAG
CTGGTCTTCGGCAGACTAGGTGACCTCATCGGACGTCGGCGCGTGTACGGATTAGCATTG
ATGTTGATGGTGCTTAGCTCCCTTGCATGTGGCTTCTCCATTTGCACCACTAAACAATGC
GTCCTCGGGAGTCTAGGCTTCTTCAGGTTCTTGCTTGGAGTTGGCATCGGCGGGGACTAT
CCCTTATCTGCTACCATCATGTCCGAGTTCGCTAACAAGATGACGCGTGGCGCCTTCATT
GCGGCGGTTTTTTCTATGCAGGGCTTTGGTATCTTGGCCAGCTCTACGGTCACCATGGCG
GTTTGCAAAATCTTTGAGGCAACCACAACTCGGGACAACGATGTCAACAAGAGGCAGCAT
CAAGCTGATATTGCCTGGAGGTTGATTCTCATGCTGGGTTCTATTCCGGCTGCTTTCACC
TATTATTGGCGTATGACGATGCCTGAATCTGCAAGATACACGGCTTTGGTGGAGCAAAAT
GTAATGCAAGCAGCAAAAGACATGGAGAAAGTACTAGACGTATCGATAAGCCAAATTGCA
GAGGAGTATCCATTGCCACCAAGTCCACCCCAGTACCCCTTAATCTCGAAGCGATTCCTA
CGCCGACACGGCCGCGACCTATTCGCCTGCGCCACCTCGTGGCTGCTCGTCGACATAGTC
TTCTACAGTAGCAACCTCTTCCAATCTAAAATCTACCATCAGTACATTGATGGCAACGGT
CATGATCAGACCAGGAGTGCATTTGAAGAAGCCTTCAAAGTTGCAAGACACCAAGCCATT
TTCGCCATTTGTTCCACCATTCCAGGTTACTTTGTCACCGTCTTTTTCATTGATCGTATA
GGCAGAGTCGCAATCCAAGCCCTAGGGTTTTTCTTCATGGGGGTAATTTACTTAGCCATT
GGGGTACCTTATAGCTATAAATGGAGCAAGCACACCAATTTCGGATTCATGTTCCTCTAT
GCCCTAACATTTTTCTTTGCAAATTTTGGCCCCAATACAACAACTTTCATTGTGCCCGCT
GAGCTATTTCCTGCAAGATTTAGATCAACATGTCATGGGATTTCGGGGGCTTTTGGAAAA
GTTGGTGCCATAATTGGGACAGTAGCCTTCTTGTGGGCTTCACACGATGATAACAAAGTT
AATGCGACTGGAGTGACCATAGCACTGTTGATCTTGGGTGGTGTTTGTTTTATGGGATTC
GCCATTACTTATTTTTTCACCCGTGAAACAATGGGGAGATCACTGGAGGAGAATGAGAAA
GAAGATGATTCCGATGCGCTGTGTTTTCTTAGATGTCTCACGAAATCAAGCTTGCGAACA
AATTCACCTCGCAACAATAATGAAGTTGCTGTTAATGCTGATGCTCCATAG

Peptide Sequence

PEP ID

Cs3g27660.1
PEP Infomation
Sequence

MALKVLSALDSAKTQYYHFKAIIIAGMGLFTDAYDLFCIPPIMKLLGRIYYSDGADRFQI
PNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGLALMLMVLSSLACGFSICTTKQC
VLGSLGFFRFLLGVGIGGDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMA
VCKIFEATTTRDNDVNKRQHQADIAWRLILMLGSIPAAFTYYWRMTMPESARYTALVEQN
VMQAAKDMEKVLDVSISQIAEEYPLPPSPPQYPLISKRFLRRHGRDLFACATSWLLVDIV
FYSSNLFQSKIYHQYIDGNGHDQTRSAFEEAFKVARHQAIFAICSTIPGYFVTVFFIDRI
GRVAIQALGFFFMGVIYLAIGVPYSYKWSKHTNFGFMFLYALTFFFANFGPNTTTFIVPA
ELFPARFRSTCHGISGAFGKVGAIIGTVAFLWASHDDNKVNATGVTIALLILGGVCFMGF
AITYFFTRETMGRSLEENEKEDDSDALCFLRCLTKSSLRTNSPRNNNEVAVNADAP*

Transcript Sequence

Transcript ID

Cs3g27660.1
Transcript Infomation

gene=Cs3g27660 CDS=163-1773
Sequence

ATTAACCCACTAGTTTACTTTGTCGTTTTTGATTATATATACAGAGAGAGAGAGAGAGAG
AGAGAGAGATCTTGAATTAATTGTTCATGAGCTATATAAATATCCAGCTCGCTGATGATC
AAGAGCAAGCAGAATAAAGAGATAAGAAAAAAATAAATAAGAATGGCGTTGAAAGTGCTC
TCAGCGCTAGACTCAGCAAAGACCCAGTACTATCACTTCAAAGCCATAATAATAGCCGGG
ATGGGGCTCTTTACCGATGCCTATGACCTCTTCTGTATCCCGCCCATCATGAAGCTCCTC
GGAAGAATCTACTACAGCGATGGCGCCGATCGATTCCAAATCCCAAACGCGGTCGTATCG
CCGATGTTAGCCCTGGCTTTACTGGGCACGGTGATAGGGCAGCTGGTCTTCGGCAGACTA
GGTGACCTCATCGGACGTCGGCGCGTGTACGGATTAGCATTGATGTTGATGGTGCTTAGC
TCCCTTGCATGTGGCTTCTCCATTTGCACCACTAAACAATGCGTCCTCGGGAGTCTAGGC
TTCTTCAGGTTCTTGCTTGGAGTTGGCATCGGCGGGGACTATCCCTTATCTGCTACCATC
ATGTCCGAGTTCGCTAACAAGATGACGCGTGGCGCCTTCATTGCGGCGGTTTTTTCTATG
CAGGGCTTTGGTATCTTGGCCAGCTCTACGGTCACCATGGCGGTTTGCAAAATCTTTGAG
GCAACCACAACTCGGGACAACGATGTCAACAAGAGGCAGCATCAAGCTGATATTGCCTGG
AGGTTGATTCTCATGCTGGGTTCTATTCCGGCTGCTTTCACCTATTATTGGCGTATGACG
ATGCCTGAATCTGCAAGATACACGGCTTTGGTGGAGCAAAATGTAATGCAAGCAGCAAAA
GACATGGAGAAAGTACTAGACGTATCGATAAGCCAAATTGCAGAGGAGTATCCATTGCCA
CCAAGTCCACCCCAGTACCCCTTAATCTCGAAGCGATTCCTACGCCGACACGGCCGCGAC
CTATTCGCCTGCGCCACCTCGTGGCTGCTCGTCGACATAGTCTTCTACAGTAGCAACCTC
TTCCAATCTAAAATCTACCATCAGTACATTGATGGCAACGGTCATGATCAGACCAGGAGT
GCATTTGAAGAAGCCTTCAAAGTTGCAAGACACCAAGCCATTTTCGCCATTTGTTCCACC
ATTCCAGGTTACTTTGTCACCGTCTTTTTCATTGATCGTATAGGCAGAGTCGCAATCCAA
GCCCTAGGGTTTTTCTTCATGGGGGTAATTTACTTAGCCATTGGGGTACCTTATAGCTAT
AAATGGAGCAAGCACACCAATTTCGGATTCATGTTCCTCTATGCCCTAACATTTTTCTTT
GCAAATTTTGGCCCCAATACAACAACTTTCATTGTGCCCGCTGAGCTATTTCCTGCAAGA
TTTAGATCAACATGTCATGGGATTTCGGGGGCTTTTGGAAAAGTTGGTGCCATAATTGGG
ACAGTAGCCTTCTTGTGGGCTTCACACGATGATAACAAAGTTAATGCGACTGGAGTGACC
ATAGCACTGTTGATCTTGGGTGGTGTTTGTTTTATGGGATTCGCCATTACTTATTTTTTC
ACCCGTGAAACAATGGGGAGATCACTGGAGGAGAATGAGAAAGAAGATGATTCCGATGCG
CTGTGTTTTCTTAGATGTCTCACGAAATCAAGCTTGCGAACAAATTCACCTCGCAACAAT
AATGAAGTTGCTGTTAATGCTGATGCTCCATAGAGAATATCACTCTCCGTCTGTGTTAAT
GTAAATTGTATCAAAATGTGGTTTGCGATTTACGAATTCTGTGATTAAGGAATTTTAATT
TGTAGAACATAATTAAGCTTGAAAACGTTGTGTATACTAGAAGTGAAAAGGCATGTTGTA
ACATAAATATATATATATATATATCAAAATAAACATTACATTGTTAATTGTTTATATATA
TATATATATATATATTTATAGCCTGTATGACAATATTAGAAATTAATTTATAATATTGAC
ACACTAGCAAATGGTATATAGTGTTTTGATGAAAGTGAAATGGAGGCATGAGGCTCATCA
CTTCTTTTTAATGGGATAAGAAGCCATTTTGTTGATTCCACAGAGGCCTTCAGGTTTTCC
AGTGTTCCTCTTCATTCTTATGTAGCCTTTTTCCCCCCATTTTGGTCCCCATGAATTCTT
CACAATTATGTAATCCAGGCCTCTGGTAGATCCATATCCAACGGCTGCCACTCCATGGTC
CAACTGAGTTCCACAGTGCCCATCATAAACACCCTAC