Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs3g26720.1
CDS Infomation

gene=Cs3g26720
Sequence

ATGGGGGAGGATTCAGAAACTATCGTGTATCTTCATGGTGACCTGGACTTAAAGATTGTC
GAAGCTCGCCGATTGCCAAACATGGACTTGGTCACGGCGCGTATCCGAAGATGCTTCGCC
GCATTTGACACGTGTCGTATTCCGTTCACGAACAGTAAAAAACGCGTGTCCCACCGTAAA
ATGATTACCAGCGATCCATACGTCACCGTTTGCCTAGGCGGAGCTACAGTGGCGCGCACG
CGCGTGATATCAAACTGTCAAAATCCGATCTGGAACGAGCATTTCAAAATCCCGTTGGCT
CATCCGGTTTCTCAAATCGAGTTCTACGTCAAAGACAACGACGTGTTTGGCGCCGACTTA
ATCGGCGTCGCAACCATTCCAGCGGCGAGGATAAAATCGGGAGAATCAATCAGCGATTGG
TTTCCGATTTTGGGCTTGTACGGTAAACCGCCGAAGTCTGAAACGGCAGTTTTTATGGAA
ATGAGGTTCTTGCCGTGTGAGGAAAATCCATTATACCGTTATGGAATCGCAGCGAATCCG
GACAGTTTTGGAGTTAATAACAGTTATTTTCCAGTGCGGAACGGAGGGCACGTGACGCTG
TATCAGGATGCGCACGTGCCGGAGTCAATGTTACCGGAGATTGAATTGGAAAAGGGGATT
CAGTATAAGCACGAGAGGTGCTGGGAAGATATCTGTCACGCGATTTTGGAGGCCCATCAT
TTGGTTTATATCGTCGGATGGTCAGTTTTCCATAAAGTGAAGCTTGTGAGAGAGCCGACG
AAGCCGTTACCGAGTGGCGGGAATTTGAGTTTAGGGGATTTGCTCAAGTATAAATCGCAA
GAAGGGGTCCGGGTTTTGTTATTAGTTTGGGATGATAAGACTTCGCATAGTAAATTTTTC
ATTAATACGGCCGGAGTAATGCAAACGCATGATGAGGAAACGCGGAAGTTCTTCAAGCAT
TCTTCTGTTCATTGTGTGCTCTCACCTAGATATGCCAGCAGTAAGCTTAGCATTTTCAAG
CAACAGGTTGTTGGAACCCTCTTCACGCATCATCAGAAATGTGTGATCGTGGATACGCAA
GCATCTGGAAACAACCGGAAGATAACTGCTTTTATAGGTGGGCTTGACCTTTGTGATGGC
CGGTATGATACACCTGAACATCGACTATTTCGGGATCTTGACACTGTATTTCAGGATGAT
TATCATAATCCAACATTTTCCGTAAGAACCAAGGGTCCAAGGCAACCATGGCACGACTTG
CATTGCAAAATTGAAGGTCCTGCTGCATATGATGTGCTTACAAACTTTGAGCAGCGTTGG
AGAAAAGCCACAAAATGGTCAGAGTTTGGACAACGCTTCAAAAGGGTAACCCGTTGGCAT
GATGATGCTCTAATAAAATTAGAACGCATTTCATGGATACTTAGTCCTTCCTCATCAGTT
CCTAATGATCATCCTAAATTATGGGTTTCCGAGGAGGACGATCCTCAAAATTGGCATGTC
CAGGTTTTTCGTTCCATAGATTCTGGATCTGTGAAAGGATTTCCTAAAGATGTTTATCAA
GCTGAACTCCAGAATCTTGTATGTGCCAAAAATTTGGTGATAGATAAGAGCATTCAGACA
GCATATATCCAGGCAATTAGATCTGCGCAACACTTCATTTATATTGAGAACCAATATTTC
TTGGGATCGTCATATGCATGGCCTGATTACAAAGACGCAGGCGCTGATAATACAATCCCA
ATGGAGTTGGCATTGAAGATTGCAAGTAAGATTAGAGCAAAGGAGAGATTTGCTGTTTAT
GTTGTCATGCCAATGTGGCCTGAGGGTGCCCCTTCTTCTGCCTCTGTGCAAGAAATTCTC
TATTGGCAGGGACAAACAAGGCAAATGATGTATGAAATCATAGCACAGGAGTTGAACTCA
ATGCAAATGGAGAACTCACATCCACAGGACTATCTAAACTTCTACTGTCTTGGTAACAGG
GAAGAAGTTCCCCAAGGAGAGCCTGGTTTGAATAATCAAACTTCCAATGGAGAATTGATT
TCAGCTTCCCAGAAATTTCAAAGGTTTATGATATATGTACATGCCAAGGGAATGGTAGTA
GATGATGAGTATGTAATTCTGGGATCTGCCAATATAAATCAACGATCTTTGGCTGGTGGC
AGAGATACGGAGATAGCCATGGGAGCATATCAACCCCATCACACATGGGGTAAGAAGAAG
GAACATCCGCACGGTCAGGTTTACGGATACAGAATGTCACTGTGGGCCGAACACATGGGG
ATGCTCGATGATTGCTTCAGGGAGCCTGAAAGTTTGGAATGTGTAAAATTTGTGAACACG
ATTGCAGAAGATAATTGGAAGAAGTTCACAGCAGATGCTTTTACACCATTGCAGGGGCAT
ATTCTCAAATACCCTGTTGAGGTAAAGAGTAACGGCAAAGAAAGCCCCTTGCCCGGCCAT
GAAACGTTTCCAGATGTTGGCGGTAAAGTGCAAGGAGCTCGATCAAATCTGCCTGATGCA
CTAACTACATAA

Peptide Sequence

PEP ID

Cs3g26720.1
PEP Infomation
Sequence

MGEDSETIVYLHGDLDLKIVEARRLPNMDLVTARIRRCFAAFDTCRIPFTNSKKRVSHRK
MITSDPYVTVCLGGATVARTRVISNCQNPIWNEHFKIPLAHPVSQIEFYVKDNDVFGADL
IGVATIPAARIKSGESISDWFPILGLYGKPPKSETAVFMEMRFLPCEENPLYRYGIAANP
DSFGVNNSYFPVRNGGHVTLYQDAHVPESMLPEIELEKGIQYKHERCWEDICHAILEAHH
LVYIVGWSVFHKVKLVREPTKPLPSGGNLSLGDLLKYKSQEGVRVLLLVWDDKTSHSKFF
INTAGVMQTHDEETRKFFKHSSVHCVLSPRYASSKLSIFKQQVVGTLFTHHQKCVIVDTQ
ASGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFQDDYHNPTFSVRTKGPRQPWHDL
HCKIEGPAAYDVLTNFEQRWRKATKWSEFGQRFKRVTRWHDDALIKLERISWILSPSSSV
PNDHPKLWVSEEDDPQNWHVQVFRSIDSGSVKGFPKDVYQAELQNLVCAKNLVIDKSIQT
AYIQAIRSAQHFIYIENQYFLGSSYAWPDYKDAGADNTIPMELALKIASKIRAKERFAVY
VVMPMWPEGAPSSASVQEILYWQGQTRQMMYEIIAQELNSMQMENSHPQDYLNFYCLGNR
EEVPQGEPGLNNQTSNGELISASQKFQRFMIYVHAKGMVVDDEYVILGSANINQRSLAGG
RDTEIAMGAYQPHHTWGKKKEHPHGQVYGYRMSLWAEHMGMLDDCFREPESLECVKFVNT
IAEDNWKKFTADAFTPLQGHILKYPVEVKSNGKESPLPGHETFPDVGGKVQGARSNLPDA
LTT*

Transcript Sequence

Transcript ID

Cs3g26720.1
Transcript Infomation

gene=Cs3g26720 CDS=30-2561
Sequence

CAAAAATCCAGTATTTTGAATATAACTGAATGGGGGAGGATTCAGAAACTATCGTGTATC
TTCATGGTGACCTGGACTTAAAGATTGTCGAAGCTCGCCGATTGCCAAACATGGACTTGG
TCACGGCGCGTATCCGAAGATGCTTCGCCGCATTTGACACGTGTCGTATTCCGTTCACGA
ACAGTAAAAAACGCGTGTCCCACCGTAAAATGATTACCAGCGATCCATACGTCACCGTTT
GCCTAGGCGGAGCTACAGTGGCGCGCACGCGCGTGATATCAAACTGTCAAAATCCGATCT
GGAACGAGCATTTCAAAATCCCGTTGGCTCATCCGGTTTCTCAAATCGAGTTCTACGTCA
AAGACAACGACGTGTTTGGCGCCGACTTAATCGGCGTCGCAACCATTCCAGCGGCGAGGA
TAAAATCGGGAGAATCAATCAGCGATTGGTTTCCGATTTTGGGCTTGTACGGTAAACCGC
CGAAGTCTGAAACGGCAGTTTTTATGGAAATGAGGTTCTTGCCGTGTGAGGAAAATCCAT
TATACCGTTATGGAATCGCAGCGAATCCGGACAGTTTTGGAGTTAATAACAGTTATTTTC
CAGTGCGGAACGGAGGGCACGTGACGCTGTATCAGGATGCGCACGTGCCGGAGTCAATGT
TACCGGAGATTGAATTGGAAAAGGGGATTCAGTATAAGCACGAGAGGTGCTGGGAAGATA
TCTGTCACGCGATTTTGGAGGCCCATCATTTGGTTTATATCGTCGGATGGTCAGTTTTCC
ATAAAGTGAAGCTTGTGAGAGAGCCGACGAAGCCGTTACCGAGTGGCGGGAATTTGAGTT
TAGGGGATTTGCTCAAGTATAAATCGCAAGAAGGGGTCCGGGTTTTGTTATTAGTTTGGG
ATGATAAGACTTCGCATAGTAAATTTTTCATTAATACGGCCGGAGTAATGCAAACGCATG
ATGAGGAAACGCGGAAGTTCTTCAAGCATTCTTCTGTTCATTGTGTGCTCTCACCTAGAT
ATGCCAGCAGTAAGCTTAGCATTTTCAAGCAACAGGTTGTTGGAACCCTCTTCACGCATC
ATCAGAAATGTGTGATCGTGGATACGCAAGCATCTGGAAACAACCGGAAGATAACTGCTT
TTATAGGTGGGCTTGACCTTTGTGATGGCCGGTATGATACACCTGAACATCGACTATTTC
GGGATCTTGACACTGTATTTCAGGATGATTATCATAATCCAACATTTTCCGTAAGAACCA
AGGGTCCAAGGCAACCATGGCACGACTTGCATTGCAAAATTGAAGGTCCTGCTGCATATG
ATGTGCTTACAAACTTTGAGCAGCGTTGGAGAAAAGCCACAAAATGGTCAGAGTTTGGAC
AACGCTTCAAAAGGGTAACCCGTTGGCATGATGATGCTCTAATAAAATTAGAACGCATTT
CATGGATACTTAGTCCTTCCTCATCAGTTCCTAATGATCATCCTAAATTATGGGTTTCCG
AGGAGGACGATCCTCAAAATTGGCATGTCCAGGTTTTTCGTTCCATAGATTCTGGATCTG
TGAAAGGATTTCCTAAAGATGTTTATCAAGCTGAACTCCAGAATCTTGTATGTGCCAAAA
ATTTGGTGATAGATAAGAGCATTCAGACAGCATATATCCAGGCAATTAGATCTGCGCAAC
ACTTCATTTATATTGAGAACCAATATTTCTTGGGATCGTCATATGCATGGCCTGATTACA
AAGACGCAGGCGCTGATAATACAATCCCAATGGAGTTGGCATTGAAGATTGCAAGTAAGA
TTAGAGCAAAGGAGAGATTTGCTGTTTATGTTGTCATGCCAATGTGGCCTGAGGGTGCCC
CTTCTTCTGCCTCTGTGCAAGAAATTCTCTATTGGCAGGGACAAACAAGGCAAATGATGT
ATGAAATCATAGCACAGGAGTTGAACTCAATGCAAATGGAGAACTCACATCCACAGGACT
ATCTAAACTTCTACTGTCTTGGTAACAGGGAAGAAGTTCCCCAAGGAGAGCCTGGTTTGA
ATAATCAAACTTCCAATGGAGAATTGATTTCAGCTTCCCAGAAATTTCAAAGGTTTATGA
TATATGTACATGCCAAGGGAATGGTAGTAGATGATGAGTATGTAATTCTGGGATCTGCCA
ATATAAATCAACGATCTTTGGCTGGTGGCAGAGATACGGAGATAGCCATGGGAGCATATC
AACCCCATCACACATGGGGTAAGAAGAAGGAACATCCGCACGGTCAGGTTTACGGATACA
GAATGTCACTGTGGGCCGAACACATGGGGATGCTCGATGATTGCTTCAGGGAGCCTGAAA
GTTTGGAATGTGTAAAATTTGTGAACACGATTGCAGAAGATAATTGGAAGAAGTTCACAG
CAGATGCTTTTACACCATTGCAGGGGCATATTCTCAAATACCCTGTTGAGGTAAAGAGTA
ACGGCAAAGAAAGCCCCTTGCCCGGCCATGAAACGTTTCCAGATGTTGGCGGTAAAGTGC
AAGGAGCTCGATCAAATCTGCCTGATGCACTAACTACATAA