Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs3g25220.3
CDS Infomation

gene=Cs3g25220
Sequence

ATGGCAACTCCAGTGGAGCCTCCTAATGGGATCAGGTCCCCAGGGAAACATTATTATTCC
ATGTGGCAAACCTTGTTTGAGATTGATACAAAATATGTGCCCATCAAACCTATTGGTCGA
GGGGCATATGGTATTGTGTGCTCTTCTGTGAACAGGGAAACCAATGAGAAAGTTGCAATA
AAAAAGATAAACAATGCATTTGAGAACCGTGTTGACGCTCTGAGAACTTTGCGAGAACTG
AAGCTTCTTCGGCATCTTCAACATGAAAATGTGATCGCATTGAAAGACGTAATGATGCCT
AGTCATAGGAGAAACTTCAAGGATGTCTATCTGGTTTATGAACTCATGGATACCGATCTG
CATCAAATTATTAAGTCTTCTCAGGCTCTCACAAATGATCACTGCCAATACTTTCTCTTC
CAGTTGCTTCGAGGTCTGAAGTATCTTCATTCAGCAAACATTCTCCACCGTGACTTGAAG
CCTGGGAATCTTCTCGTCAATGCAAACTGTGACCTAAAGATATGTGATTTTGGGCTGGCA
CGCACTAGCAATGGCAAGAATCAGTTTATGACAGAGTATGTTGTCACTCGCTGGTACCGG
GCTCCAGAGCTTCTCCTATGCTGTGACAACTATGGGACATCCATTGATGTCTGGTCTGTT
GGATGCATCTTTGCTGAGCTCCTTGGTCGCAAACCTATCTTCCCTGGAACAGAGTGTCTT
AACCAACTTAAACTTATCATCAACATCCTTGGCAGCCGAAGGGAGGAGGATCTTGAGTTT
ATTGACAACCCAAAGGCGAGGAAATACATTAAATCGCTTCCGTATACACCTGGGACTCCC
TTTTCCCGTCTTTACCCGGATGCGCATCCTTTAGCTATTGATCTGCTGCAAAAGATGCTT
GTTTTTGACCCCACAAAGAGGATTAGTGTTACTGAAGCACTCCAACACCCTTACATGTCC
CCACTGTATGATCCTAGCTCTAACCCTCCAGCTCAGGTGCCTATTGATCTTGATATGGAT
GAGGAATCAGGGGAAGAGATGATAAGGGAAATGATGTTGAAGGAAATGCTGCATTACCAC
CCCGAGGCAATTACAGCCAACACTGAGGTGTGCTCCTCCTAA

Peptide Sequence

PEP ID

Cs3g25220.3
PEP Infomation
Sequence

MATPVEPPNGIRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAI
KKINNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDL
HQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLA
RTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECL
NQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKML
VFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEMLHYH
PEAITANTEVCSS*

Transcript Sequence

Transcript ID

Cs3g25220.3
Transcript Infomation

gene=Cs3g25220 CDS=432-1553
Sequence

CAAGAGCAAATCCCGGAGCGCGTGATGCATTCTGCCCAAACCCATTAAAAAAAAAAAATC
AACATTTATAAGTTAAATTATAAGTTTTGTCCGATTGATGGCAACTGGATAACGAATCTT
GATCCGAGCGAAATCGAAATCCCGTCGAACCCATCGTTGACAAAATATATATAAAAATTT
CAAACAAATTCGTTCACCTGATCGAATGCTAAGCTCAGTCACAGAGCAATTTGGCGCCAA
TTAACGAGCAAATTGGTTGGATTCGAGAAGGATTTTGATGGATTCAGATGTAGCTTAGAG
AATTGTCTCGGGTGATTTCACGTCACCGGAAGATCAGAAGGAAAGTATAAAATTAGCTTT
CATATTGTTTGAAAGAGATAATTGGAGACGTCACCTTCAATAAAGGGAACTTTTTTAGCT
TGAAGAAGGAAATGGCAACTCCAGTGGAGCCTCCTAATGGGATCAGGTCCCCAGGGAAAC
ATTATTATTCCATGTGGCAAACCTTGTTTGAGATTGATACAAAATATGTGCCCATCAAAC
CTATTGGTCGAGGGGCATATGGTATTGTGTGCTCTTCTGTGAACAGGGAAACCAATGAGA
AAGTTGCAATAAAAAAGATAAACAATGCATTTGAGAACCGTGTTGACGCTCTGAGAACTT
TGCGAGAACTGAAGCTTCTTCGGCATCTTCAACATGAAAATGTGATCGCATTGAAAGACG
TAATGATGCCTAGTCATAGGAGAAACTTCAAGGATGTCTATCTGGTTTATGAACTCATGG
ATACCGATCTGCATCAAATTATTAAGTCTTCTCAGGCTCTCACAAATGATCACTGCCAAT
ACTTTCTCTTCCAGTTGCTTCGAGGTCTGAAGTATCTTCATTCAGCAAACATTCTCCACC
GTGACTTGAAGCCTGGGAATCTTCTCGTCAATGCAAACTGTGACCTAAAGATATGTGATT
TTGGGCTGGCACGCACTAGCAATGGCAAGAATCAGTTTATGACAGAGTATGTTGTCACTC
GCTGGTACCGGGCTCCAGAGCTTCTCCTATGCTGTGACAACTATGGGACATCCATTGATG
TCTGGTCTGTTGGATGCATCTTTGCTGAGCTCCTTGGTCGCAAACCTATCTTCCCTGGAA
CAGAGTGTCTTAACCAACTTAAACTTATCATCAACATCCTTGGCAGCCGAAGGGAGGAGG
ATCTTGAGTTTATTGACAACCCAAAGGCGAGGAAATACATTAAATCGCTTCCGTATACAC
CTGGGACTCCCTTTTCCCGTCTTTACCCGGATGCGCATCCTTTAGCTATTGATCTGCTGC
AAAAGATGCTTGTTTTTGACCCCACAAAGAGGATTAGTGTTACTGAAGCACTCCAACACC
CTTACATGTCCCCACTGTATGATCCTAGCTCTAACCCTCCAGCTCAGGTGCCTATTGATC
TTGATATGGATGAGGAATCAGGGGAAGAGATGATAAGGGAAATGATGTTGAAGGAAATGC
TGCATTACCACCCCGAGGCAATTACAGCCAACACTGAGGTGTGCTCCTCCTAATCTTGTC
TTCCTTGGCTTAACAGTGAGGAATGGGGAGGCTGTTTGGGTTTGCTTGCTTGCTGGCTAG
CTCGTGCAATCAACGAAGAATTCCTTCACCTTAGTAAGCTACTTCAGCTGATGACAGTTA
TTTATTTGCATTCTGTTTCCTGTTTTTTAATAATCCAGAAGAAACATGGCATTAGTCATT
AGTAGGGCTGCTAATAATTTTGTTTTGTTTTGTTTCGTTTCGTTTAGTTTTTTTTTTTTT
TTTAAAGTATGGTTATGAGTTTGAGCGCTGTACTGTACCGTAGGTGGCCCTGTTTAATTT
GTATATAAGAGTGGTGCTGTTTGTGTATGAACTTATTTTTTGTAAATTAATATTTAGATA
CATGAGAGTAAGTTAACAATG