Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs3g23500.3
CDS Infomation

gene=Cs3g23500
Sequence

ATGGACGGTCGTGATGATACGGTTAGATTAGGTGCTCTAAACTTGAAGCCGGCTGCTCGT
GAATTCGATTTGGATCCAGATGTGTCCGTTTCATCGCCGGTGACGAGACAGAAAGCCGCT
GCCGCAAAGCAGTTCATTGAGAATCATTACAAGAACTACTTGCAAGGATTGCAAGATCGT
AAAGAGAGGCGTAGAGCCCTTCAAATGAGAGCACAACAAGCTGCGGTCTCAAATGAGGAA
CAAGAGGAGATGCTGAGGAATTTAGAGCGCAGAGAAACTGAATATATGAGGCTGCAGAGG
CGTAAAATTGGGATTGATGACTTTGAGCAATTAACTTTAATTGGAAAAGGTGCATTTGGT
GAGGTCAGGTTATGTCGTGCTAAAACTACTGGAGAGATCTTTGCCATGAAGAAATTGAAG
AAATCGGAGATGCTTAAACGAGGACAGGTTGAGCATGTTCGATCAGAGAGGAACTTACTT
GCAGAGGTTGATAGTCGGTGCATAGTACAGCTTTTCTACTCTTTTCAAGATTCTGATTTC
TTATATCTCATCATGGAGTATTTACCTGGTGGTGACATTATGACATTACTAATGAGAGAA
GATATTCTTTCCGAGGATGTTGCACGTTTTTATATAGCAGAAAGCGTTCTGGCTATTCAT
TCAATTCACCAACATAACTATGTTCATAGGGATATAAAACCAGATAACCTGATACTAGAC
AAAAATGGCCATTTGAAGCTTTCAGACTTTGGTTTGTGCAAGCCCCTAGAGGACAAATAT
TCATCAATTCTGTTGGAAGATGAAGACATTATAAACCAGGAAACTGTAAGCGAAGCTGAA
GGACAGTGGATGATGCCAAAAGAGCGTTTGCAGCAGTGGAAACGTAATCGCCGTGCATTG
GCTTATTCAACTGTTGGAACTCTTGATTATATGGCACCTGAAGTTTTGCTTAAGAAGGGA
TATGGAATGGAGTGTGATTGGTGGTCCCTGGGTGCAATCATGTATGAGATGCTGATAGGC
TATCCTCCCTTCTGTTCTGATGATCCAAGGATCACATGCCGCAAGATAGTCAATTGGAAA
ACATGCCTGAAATTCCCTGAAGAACCAAAAATATCAGATGAGGCTAGGGATCTGATTTGT
CACTTGCTCTGTGATGTTGAGACAAGGCTTGGAACCAGAGGAGTTGAAGAATTGAAGGAA
CATCCATGGTTCAGAGGAATCCAATGGGACAAGTTGTATGAAATGGAAGCTGCATATAAG
CCTACAGTCAATGGGGAGCTGGATACTCAGAATTTTGAGAAGTTTCCAGAAGTAGACGGC
CCACCATCGGAGATACCAAGTGTGGGACCTTGGAGAAAGATGCTGACATCAAAAGATACC
AATTTTATCGGATATACATTTAAGAAATCTGACGTCCTTAAATCACTTGAAAATTCAGGT
ACGGACATGAGGTCGAATGGATCATCAAAAGTTCCCTCTTTGATTTCTTTGTTAGGTATG
ATATACTATATCTTTTACTATAGCGCCTTTTGA

Peptide Sequence

PEP ID

Cs3g23500.3
PEP Infomation
Sequence

MDGRDDTVRLGALNLKPAAREFDLDPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDR
KERRRALQMRAQQAAVSNEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFG
EVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDF
LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD
KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRAL
AYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWK
TCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYK
PTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDVLKSLENSG
TDMRSNGSSKVPSLISLLGMIYYIFYYSAF*

Transcript Sequence

Transcript ID

Cs3g23500.3
Transcript Infomation

gene=Cs3g23500 CDS=428-1960
Sequence

CAAGCCACTCAGCCGATTGTAATTTCGTTTAAAAGTCAGAAATAAGTAAATGATTTTTTT
TTTTTTAATTTTCAAATTGTGCTCCAGAGATTCCAGTTCATGCGAGAAAACGAAAGTCTG
AAAATCGCTGGCGTTGATCACACTCAATTCCCTATAAATTAAAAGAAAAGAAAAGAAATG
ACAAATTAAAATCTTAACAAAAAGGAAAACAGATAACAGATAAGACAGCCCTGCGTGCCA
TATAAATTATCAACAAATGAAGTTACTTGCCAGTTCATTTCTCTCTTTCTTTCAGTCATT
TTCACAAACACAGACTGACACTGACTCCTAAGATCTCTCCTCGAAACTCTTCGCTTCCTC
CTAAGCTTTGCAGCAAATGTATCTCTGATTTAGGATAATTGCAAAAACTGATCTGATTTC
GGCGAAAATGGACGGTCGTGATGATACGGTTAGATTAGGTGCTCTAAACTTGAAGCCGGC
TGCTCGTGAATTCGATTTGGATCCAGATGTGTCCGTTTCATCGCCGGTGACGAGACAGAA
AGCCGCTGCCGCAAAGCAGTTCATTGAGAATCATTACAAGAACTACTTGCAAGGATTGCA
AGATCGTAAAGAGAGGCGTAGAGCCCTTCAAATGAGAGCACAACAAGCTGCGGTCTCAAA
TGAGGAACAAGAGGAGATGCTGAGGAATTTAGAGCGCAGAGAAACTGAATATATGAGGCT
GCAGAGGCGTAAAATTGGGATTGATGACTTTGAGCAATTAACTTTAATTGGAAAAGGTGC
ATTTGGTGAGGTCAGGTTATGTCGTGCTAAAACTACTGGAGAGATCTTTGCCATGAAGAA
ATTGAAGAAATCGGAGATGCTTAAACGAGGACAGGTTGAGCATGTTCGATCAGAGAGGAA
CTTACTTGCAGAGGTTGATAGTCGGTGCATAGTACAGCTTTTCTACTCTTTTCAAGATTC
TGATTTCTTATATCTCATCATGGAGTATTTACCTGGTGGTGACATTATGACATTACTAAT
GAGAGAAGATATTCTTTCCGAGGATGTTGCACGTTTTTATATAGCAGAAAGCGTTCTGGC
TATTCATTCAATTCACCAACATAACTATGTTCATAGGGATATAAAACCAGATAACCTGAT
ACTAGACAAAAATGGCCATTTGAAGCTTTCAGACTTTGGTTTGTGCAAGCCCCTAGAGGA
CAAATATTCATCAATTCTGTTGGAAGATGAAGACATTATAAACCAGGAAACTGTAAGCGA
AGCTGAAGGACAGTGGATGATGCCAAAAGAGCGTTTGCAGCAGTGGAAACGTAATCGCCG
TGCATTGGCTTATTCAACTGTTGGAACTCTTGATTATATGGCACCTGAAGTTTTGCTTAA
GAAGGGATATGGAATGGAGTGTGATTGGTGGTCCCTGGGTGCAATCATGTATGAGATGCT
GATAGGCTATCCTCCCTTCTGTTCTGATGATCCAAGGATCACATGCCGCAAGATAGTCAA
TTGGAAAACATGCCTGAAATTCCCTGAAGAACCAAAAATATCAGATGAGGCTAGGGATCT
GATTTGTCACTTGCTCTGTGATGTTGAGACAAGGCTTGGAACCAGAGGAGTTGAAGAATT
GAAGGAACATCCATGGTTCAGAGGAATCCAATGGGACAAGTTGTATGAAATGGAAGCTGC
ATATAAGCCTACAGTCAATGGGGAGCTGGATACTCAGAATTTTGAGAAGTTTCCAGAAGT
AGACGGCCCACCATCGGAGATACCAAGTGTGGGACCTTGGAGAAAGATGCTGACATCAAA
AGATACCAATTTTATCGGATATACATTTAAGAAATCTGACGTCCTTAAATCACTTGAAAA
TTCAGGTACGGACATGAGGTCGAATGGATCATCAAAAGTTCCCTCTTTGATTTCTTTGTT
AGGTATGATATACTATATCTTTTACTATAGCGCCTTTTGATATTGGGTACGGTTGTACTA
CTATCTTGGCTGTGACAGGAGATGCTGTACCTTTTTTTTCATGACAAATTATCTAGTAAT
CAGAGCAGAGGAATCTAGTTCCCTAGATTTACTATGTGTCCACAGCTGATTATGGAACTA
TTTATCATAATAGCATACATGCGTTGCACTTTGAGAGGAGAATCATGAAACAATTTTGTT
AAATTAATGAACAGTTGCTATTTAAAAAATAATAATGATAATACAGTTCCCTGTTAAGCA
GGAATTAACTAACAACTAAAACATGTACAGTGAATTTTTCCTATAACTATTTTATGGAAT
ATATGCACCATAAATTTCAGAACTGCATTCCAAATGTGCATGTTCTTTTTTTATTTCAGG
CCTTGTAAACATGTTTCTTCAAATGCTTCACATAGGAGTTATATAGTTTATAGCTTAGTT
CAAGCATCTTTGGACTTTTTATCTGCTCGACATGGCGTCTTTTGAATGAAGCAGTTCCAC
TAGGGAACTCCTTTTTCTATGTTTGAAGAAAATATTCTCCTGTATGACTTTTTCTTTAAC
TTTCTTCGTGGGGAACGGTTCTGGAAAGTTGAGTGCCTTGAATCTTGCGCAACTGACAAA
CTTAAAGAGTTGACGATTTCAAGCTAGGTCCATCTTGATATAGTCCAAGCGGAACCCTGG
CGACTACCCATTTTTTATTTTTTTATTTTTTTCTGGCTGATGCAGGTAGGATTGACGTGC
AGGAAACTGCCATTTCAGAGTGTGATCAGCAGAAGCAGGAAACCTGAGTGGATCATTCTG
TTTTACTTATTCGGGAGTTCCGTTCCTATTTTTATTCCATTGCGTGTATAACCTTCAAAA
GCAGGTTTTGTATAAAAACCGAATATGGCAAAGAACTGTGGGGAGTAACGACCCGAGAAT
AAGGAGGTCAGCCTAAAAGTCGATGTGATCTCAAGCGTAATTCTTTTTTTTCGTACTGCA
AATGTCATCGATCAGAGTTACTGTGAAGCCCCAAATATGTTCAATTCTTTCTTATACTGA
TATAATAAATAAGAGCTAATGTAAAGCCTGGATTAAGCTCAATTCCTTGTCAATGCCAAT
TTTGCTAAAAAAGTCACATTTGAAATACGAGTTCATATAGTTTTATTAATGTCCTGTAAT
AGAATTTTTAGCTGGCTACACCTACATTGACGCGCTGGGCTCATTTTGTTTTGTTTGATC
ACTACAGTGAGTCTGAGATCCCCCCATTTGTTAAGTATCCAATAGCATTTGTAAGTGGAA
GCTATGACTCTATGAACATGAGTGGCCATTTTAATTTTCAACGCCTATTAGAGAGTGTAT
GTATGCACGTGTTTGCCGATGATGTTGATACGGGAAACAGAACGGCACGTTATTAAGTGC
AGAACCCATTTGTCTTGTTTATACTGTCAACTAGGTGTG