Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs3g16400.1
CDS Infomation

gene=Cs3g16400
Sequence

ATGCTGTCCAGGATAGCTAGCTGCGACTCTCATGGGCAAGATTCTTCCTACTTTCTTGGT
TGGGAAGCTTACGAAAATAATCCTTATGATCAACTTCATAATCCCTCCGGAATCATTCAA
ATGGGACTCGCTGAGAATCAGCTTTCGTTTGACCTCCTTGAGTCGTGGCTTGCAAGCAAC
CAAGAGGCAGTGGAGCTGAAGAGAAATGGAGAATCTCTATTCAGAGAGCTGGCTCTTTTC
CAGGACTATCACGGCTTTCCAGACGCTAAGAAAGAGCTCGTAAAGTTAATGGCGAGAATA
AGAGGCAACAAGGTCAAATTTGATCCGAACAAGCTGGTACTCACAGCTGGTTCAACTGCA
GCCAACGAGACTCTAATGTTTTGCCTTGCAGACCCCGGCGATGCTTTCCTTCTTCCCACA
CCCTACTACCCCGGATTTGATAGAGATCTTAAATGGCGTCCCGGAGTTGAAATTGTTCCA
ATTCATTGCTCAAGTTCAAATGGTTTCAGAATAACCATTTCTGCCCTGGAAAATGCCTAT
CAACAAGCCCAAACACTTAACCTAAAAGTTAAAGGGGTTTTGATAACTAATCCTTCAAAC
CCCTTAGGCACAGCCATGACTCACCAAGAACTAAACCACCTCATTAATTTCTCCAAGTCC
AAAAGAATTCACATAGTGAGTGATGAAATTTACTCAGGCACCGTCTTTGACTCACCCAGC
AGCAGCTTTATAAGCATCATGGAGGCTGTAATGGACCGAAACATTGACGAGTCCGATGAT
CTGTGGAGTCGCATTCACATTGTTTACAGTCTCTCAAAGGATTTCAGCATGCCTGGATTC
CGTGTTGGCATGATCTATTCCAACAATGAAAGAGTTGTTTCGGCGGCGACTAAAATGTCA
AGCTTCGGCCTTGTTTCTTCTCAAACACAGTATCTACTCTCACGCATGCTCTCGGACAAG
AAGTTCACATGCAATTACATGAAGGAAAATCGGAAGAGGCTTAGGAAAAGAAAGGAAATG
CTTGTTTCCGGACTCAAAGTTGCAGGAATCAGATGCTTAAAGAGTAACGCAGGATTATTT
TGCTGGGTAGACATGAGGCACCTTTTGGTATCCAACACATTTGAAGCTGAGAAGGAGCTG
TGGAAAAAAATAATTTTTGAAGTAGGGTTGAATATCTCTCCAGGCTCTTCTTGCCATTGC
AATGAACCAGGGTGGTTCAGGATTTGCTTTGCCAACATCACTGAAGAAACACTACAGGTT
GCATTGCAGCGCATCAAGGTATTTGCACAATCCTGCAACCCCCAGATGCTGCTGCTGCAA
AGGAGATCAATTATTGGCAAATGGATCTCCAAGTTATCTTCATCATCATCATATGATCAG
GAACCAGACCGTTAA

Peptide Sequence

PEP ID

Cs3g16400.1
PEP Infomation
Sequence

MLSRIASCDSHGQDSSYFLGWEAYENNPYDQLHNPSGIIQMGLAENQLSFDLLESWLASN
QEAVELKRNGESLFRELALFQDYHGFPDAKKELVKLMARIRGNKVKFDPNKLVLTAGSTA
ANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRPGVEIVPIHCSSSNGFRITISALENAY
QQAQTLNLKVKGVLITNPSNPLGTAMTHQELNHLINFSKSKRIHIVSDEIYSGTVFDSPS
SSFISIMEAVMDRNIDESDDLWSRIHIVYSLSKDFSMPGFRVGMIYSNNERVVSAATKMS
SFGLVSSQTQYLLSRMLSDKKFTCNYMKENRKRLRKRKEMLVSGLKVAGIRCLKSNAGLF
CWVDMRHLLVSNTFEAEKELWKKIIFEVGLNISPGSSCHCNEPGWFRICFANITEETLQV
ALQRIKVFAQSCNPQMLLLQRRSIIGKWISKLSSSSSYDQEPDR*

Transcript Sequence

Transcript ID

Cs3g16400.1
Transcript Infomation

gene=Cs3g16400 CDS=1-1395
Sequence

ATGCTGTCCAGGATAGCTAGCTGCGACTCTCATGGGCAAGATTCTTCCTACTTTCTTGGT
TGGGAAGCTTACGAAAATAATCCTTATGATCAACTTCATAATCCCTCCGGAATCATTCAA
ATGGGACTCGCTGAGAATCAGCTTTCGTTTGACCTCCTTGAGTCGTGGCTTGCAAGCAAC
CAAGAGGCAGTGGAGCTGAAGAGAAATGGAGAATCTCTATTCAGAGAGCTGGCTCTTTTC
CAGGACTATCACGGCTTTCCAGACGCTAAGAAAGAGCTCGTAAAGTTAATGGCGAGAATA
AGAGGCAACAAGGTCAAATTTGATCCGAACAAGCTGGTACTCACAGCTGGTTCAACTGCA
GCCAACGAGACTCTAATGTTTTGCCTTGCAGACCCCGGCGATGCTTTCCTTCTTCCCACA
CCCTACTACCCCGGATTTGATAGAGATCTTAAATGGCGTCCCGGAGTTGAAATTGTTCCA
ATTCATTGCTCAAGTTCAAATGGTTTCAGAATAACCATTTCTGCCCTGGAAAATGCCTAT
CAACAAGCCCAAACACTTAACCTAAAAGTTAAAGGGGTTTTGATAACTAATCCTTCAAAC
CCCTTAGGCACAGCCATGACTCACCAAGAACTAAACCACCTCATTAATTTCTCCAAGTCC
AAAAGAATTCACATAGTGAGTGATGAAATTTACTCAGGCACCGTCTTTGACTCACCCAGC
AGCAGCTTTATAAGCATCATGGAGGCTGTAATGGACCGAAACATTGACGAGTCCGATGAT
CTGTGGAGTCGCATTCACATTGTTTACAGTCTCTCAAAGGATTTCAGCATGCCTGGATTC
CGTGTTGGCATGATCTATTCCAACAATGAAAGAGTTGTTTCGGCGGCGACTAAAATGTCA
AGCTTCGGCCTTGTTTCTTCTCAAACACAGTATCTACTCTCACGCATGCTCTCGGACAAG
AAGTTCACATGCAATTACATGAAGGAAAATCGGAAGAGGCTTAGGAAAAGAAAGGAAATG
CTTGTTTCCGGACTCAAAGTTGCAGGAATCAGATGCTTAAAGAGTAACGCAGGATTATTT
TGCTGGGTAGACATGAGGCACCTTTTGGTATCCAACACATTTGAAGCTGAGAAGGAGCTG
TGGAAAAAAATAATTTTTGAAGTAGGGTTGAATATCTCTCCAGGCTCTTCTTGCCATTGC
AATGAACCAGGGTGGTTCAGGATTTGCTTTGCCAACATCACTGAAGAAACACTACAGGTT
GCATTGCAGCGCATCAAGGTATTTGCACAATCCTGCAACCCCCAGATGCTGCTGCTGCAA
AGGAGATCAATTATTGGCAAATGGATCTCCAAGTTATCTTCATCATCATCATATGATCAG
GAACCAGACCGTTAATTAATTAACTAGATAATAAACTAATTATTATTTAATTAGTCTACA
TGTTTAAATTTTTCGTGCCACAACATATGTCTTAG