Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs3g13860.1
CDS Infomation

gene=Cs3g13860
Sequence

ATGGGAATGTTATCGGCGTCAATAGGGAAGACGAAGCTTGACTCGGGATGGCTCGCCGCG
AGATCGACGGAGGTTGGACTCAGTGGGACGCAGCTCACCACGTCTCACCCTCCGACTGGG
CCCGCCAAGCCCTGGATGGAGGCTGTAGTCCCGGGAACGGTCTTGGCAACTCTGGTGAAG
AACAAAGCGGTGCCTGATCCTTTTTATGGGTTGGAGAATGAGATGATCTTAGACATAGCT
GATTCCGGGAGGGAATACTATACATTCTGGTTTTTTACAACCTTTCAGTGTAAGCTGTCA
GAGAATCAGCATTTGGATCTGAATTTCCGTGCAATCAACTACTCTGCCGAAGTTTACTTG
AATGGCCAGAAAAGGGTCCTCCAGAAAGGAATGTTTCGAAGACATTCGCTTGATGTTACT
GATATTCTTCATCCTGATGGTCAAAACTTGCTGGCTGTTCTAGTTCATCCTCCGGATCAT
CCTGGGACAATTCCTCCTGAGGGGGGACAAGGTGGTGATCATGAGATTGGAAAAGACGTA
GCCACACAATACGTAGAGGGCTGGGATTGGATAGCTCCTATAAGGGATCGGAACACCGGC
ATATGGGATGAAGTGTCAATTTCTGTCACGGGGCCTGTGAAAATAATTGATCCCCACTTG
GTTTCATCATTTTTTGACAATTACACGAGGGTATATCTGCATGCTTCAACTGAGTTGGAA
AACAGAAGCACCTGGGTTGCTGAGTGTTCTTTAAGCATCCAAGTGACTACTGACCTTGAG
GGAGGTGTTTGTCTAGTGGAGCATCTTCAGACTCAACATCTATCAATCTCTCCAGGAGCA
CATGTACAGTATACATTTCCTCAGCTCTTTTTCTACAAACCCAATTTATGGTGGCCAAAT
GGCATGGGAAAGCAATCTCTATACACTGTCCGCATTAGTGTTGATGTAAAAGGATATGGA
GAATCTGATTTATGGAGCCATCTGTTTGGGTTCCGCAAAATTGAGAGCCACATTGATAAT
GCCACTGGTGGAAGGTTGTTCAAGGTCAATGGGCAGCCTATTTTTATTCGTGGTGGTAAT
TGGATTTTGTCAGATGGGCTCCTACGGCTGTCGAAAAAGCGATACAAAACAGATATCAAG
TTTCATGCAGACATGAATATGAACATGATCCGCTGTTGGGGTGGCGGACTGGCTGAGCGG
CCTGAGTTTTATCATTATTGTGATATTTATGGTTTGCTGGTCTGGCAAGAGTTTTGGATT
ACGGGAGATGTCGATGGAAGGGGTGTGCCAGTATCAAACCCAGATGGTCCCCTGGACCAT
GACCTGTTTATGCTGTGCGCAAGAGATACTGTCAAGCTTCTAAGAAACCATCCAAGTCTT
GCTCTTTGGGTTGGTGGAAATGAACAGGTTCCACCAGAGGACATCAACAAAGCTTTGAAG
AATGACCTGAAGCTCCATCCTTATTTTAAGAATTCAAATGAAACTGGGAACTTTACAGAA
GATTTGTCTCTGTCGGTTCAGGATCCTAGCCAATATCTTGATGGTACACGCATTTATATA
CAGGGATCCCTGTGGGATGGCTTTGCAGATGGAAAGGGGAACTTCACTGATGGTCCTTAT
GAAATCCAATATCCTGAAGACTTCTTTAAGGATAGTTTTTACCAATATGGATTTAATCCT
GAGGTTGGTTCAGTGGGAATGCCAGTTGCAGCTACCATCAGAGCAACCATGCCTCCAGAA
GGATGGCAAATTCCGGTGTTTAAACAGGGTTCTGATGGTTACATAGAAGAAGTTCCAAAC
CCCATTTGGAAATACCATAAGTATATTCCTTATTCAAAACCAGGGAAGGTTCATGATCAG
ATTCTACTTTATGGGATCCCAAAAGATCTTGATGATTTTTGTTTGAAGGCTCAACTTGTC
AACTACATTCAGTATAGGGCTCTGTTGGAGGGCTGGAGTTCCCGCATGTGGAGCAAATAC
ACTGGTGTCCTGATTTGGAAGAATCAGAATCCTTGGACAGGTCTCAGAGGTCAGTTTTAT
GATCATCTTCTCGACCAAACAGCAGGATTCTATGGCTGTCGATGTGCTGCAGAACCAATT
CATGTCCAGCTGAATCTGGCTTCATATTTCATAGAAGTCGTTAACACTACATCACAGGAA
CTCTCCGACGTAGCTATAGAAGCATCTGTTTGGGATCTGGATGGAGCATGCCCATACTAC
AAAGTTACTGAGAAGCTTTCTGTGCCGCCAAAGAAAGTAGTGTCCATTGCAGAGATGAAG
TATCCAAAGACCAAAAACCCAAAGCCAGTCTACTTTCTTCTTCTCAAACTTTACAACATG
TCAGATTATGGCATTATATCCAGGAACTTTTATTGGTTGCATCTACCTGGTGGAGATTAC
AAGCTGTTGGAGCCATACAGGAAGAAGAATATCCCCCTCAAGTTAACGTCACAGATTTTT
ATCAAAGGGTCTACTTATGAAGTTGAGATGCAAGTGCACAACAGATCTAAGAAACAGGAC
CCTAAGCGTTTAACATATAAGAATAATTTCACAACTGTACCTGTTGATGGTGATTTTAAT
ATGGCCTCAACAGAACCTGTAAATAGCGCAACTGAGGAAAAACAAGAAGCTGGTTTATTC
AGGAGAATATGCAGACATTTCAAGAAGGACACTGATAGTTTGAAGGTAGCTGAATTGAAT
GGGACTGATTCTGGAGTTGCTTTCTTCCTTCATTTCTCGGTTCGTGGTTGGAGTAAATCT
CACAAGGAAGGAGAAGATACAAGAATTCTTCCTGTGCATTACTCGGACAACTATTTTTCA
CTTGCACCAGGTGAGGTGATGCCCATCAAGATCTCTTTTGAGGTCCCTCACGGTGTCACC
CCAAAAGTAACTCTTCATGGCTGGAATTACCATGTCGGTCAAACTATACTATGA

Peptide Sequence

PEP ID

Cs3g13860.1
PEP Infomation
Sequence

MGMLSASIGKTKLDSGWLAARSTEVGLSGTQLTTSHPPTGPAKPWMEAVVPGTVLATLVK
NKAVPDPFYGLENEMILDIADSGREYYTFWFFTTFQCKLSENQHLDLNFRAINYSAEVYL
NGQKRVLQKGMFRRHSLDVTDILHPDGQNLLAVLVHPPDHPGTIPPEGGQGGDHEIGKDV
ATQYVEGWDWIAPIRDRNTGIWDEVSISVTGPVKIIDPHLVSSFFDNYTRVYLHASTELE
NRSTWVAECSLSIQVTTDLEGGVCLVEHLQTQHLSISPGAHVQYTFPQLFFYKPNLWWPN
GMGKQSLYTVRISVDVKGYGESDLWSHLFGFRKIESHIDNATGGRLFKVNGQPIFIRGGN
WILSDGLLRLSKKRYKTDIKFHADMNMNMIRCWGGGLAERPEFYHYCDIYGLLVWQEFWI
TGDVDGRGVPVSNPDGPLDHDLFMLCARDTVKLLRNHPSLALWVGGNEQVPPEDINKALK
NDLKLHPYFKNSNETGNFTEDLSLSVQDPSQYLDGTRIYIQGSLWDGFADGKGNFTDGPY
EIQYPEDFFKDSFYQYGFNPEVGSVGMPVAATIRATMPPEGWQIPVFKQGSDGYIEEVPN
PIWKYHKYIPYSKPGKVHDQILLYGIPKDLDDFCLKAQLVNYIQYRALLEGWSSRMWSKY
TGVLIWKNQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPIHVQLNLASYFIEVVNTTSQE
LSDVAIEASVWDLDGACPYYKVTEKLSVPPKKVVSIAEMKYPKTKNPKPVYFLLLKLYNM
SDYGIISRNFYWLHLPGGDYKLLEPYRKKNIPLKLTSQIFIKGSTYEVEMQVHNRSKKQD
PKRLTYKNNFTTVPVDGDFNMASTEPVNSATEEKQEAGLFRRICRHFKKDTDSLKVAELN
GTDSGVAFFLHFSVRGWSKSHKEGEDTRILPVHYSDNYFSLAPGEVMPIKISFEVPHGVT
PKVTLHGWNYHVGQTIL*

Transcript Sequence

Transcript ID

Cs3g13860.1
Transcript Infomation

gene=Cs3g13860 CDS=1-2934
Sequence

ATGGGAATGTTATCGGCGTCAATAGGGAAGACGAAGCTTGACTCGGGATGGCTCGCCGCG
AGATCGACGGAGGTTGGACTCAGTGGGACGCAGCTCACCACGTCTCACCCTCCGACTGGG
CCCGCCAAGCCCTGGATGGAGGCTGTAGTCCCGGGAACGGTCTTGGCAACTCTGGTGAAG
AACAAAGCGGTGCCTGATCCTTTTTATGGGTTGGAGAATGAGATGATCTTAGACATAGCT
GATTCCGGGAGGGAATACTATACATTCTGGTTTTTTACAACCTTTCAGTGTAAGCTGTCA
GAGAATCAGCATTTGGATCTGAATTTCCGTGCAATCAACTACTCTGCCGAAGTTTACTTG
AATGGCCAGAAAAGGGTCCTCCAGAAAGGAATGTTTCGAAGACATTCGCTTGATGTTACT
GATATTCTTCATCCTGATGGTCAAAACTTGCTGGCTGTTCTAGTTCATCCTCCGGATCAT
CCTGGGACAATTCCTCCTGAGGGGGGACAAGGTGGTGATCATGAGATTGGAAAAGACGTA
GCCACACAATACGTAGAGGGCTGGGATTGGATAGCTCCTATAAGGGATCGGAACACCGGC
ATATGGGATGAAGTGTCAATTTCTGTCACGGGGCCTGTGAAAATAATTGATCCCCACTTG
GTTTCATCATTTTTTGACAATTACACGAGGGTATATCTGCATGCTTCAACTGAGTTGGAA
AACAGAAGCACCTGGGTTGCTGAGTGTTCTTTAAGCATCCAAGTGACTACTGACCTTGAG
GGAGGTGTTTGTCTAGTGGAGCATCTTCAGACTCAACATCTATCAATCTCTCCAGGAGCA
CATGTACAGTATACATTTCCTCAGCTCTTTTTCTACAAACCCAATTTATGGTGGCCAAAT
GGCATGGGAAAGCAATCTCTATACACTGTCCGCATTAGTGTTGATGTAAAAGGATATGGA
GAATCTGATTTATGGAGCCATCTGTTTGGGTTCCGCAAAATTGAGAGCCACATTGATAAT
GCCACTGGTGGAAGGTTGTTCAAGGTCAATGGGCAGCCTATTTTTATTCGTGGTGGTAAT
TGGATTTTGTCAGATGGGCTCCTACGGCTGTCGAAAAAGCGATACAAAACAGATATCAAG
TTTCATGCAGACATGAATATGAACATGATCCGCTGTTGGGGTGGCGGACTGGCTGAGCGG
CCTGAGTTTTATCATTATTGTGATATTTATGGTTTGCTGGTCTGGCAAGAGTTTTGGATT
ACGGGAGATGTCGATGGAAGGGGTGTGCCAGTATCAAACCCAGATGGTCCCCTGGACCAT
GACCTGTTTATGCTGTGCGCAAGAGATACTGTCAAGCTTCTAAGAAACCATCCAAGTCTT
GCTCTTTGGGTTGGTGGAAATGAACAGGTTCCACCAGAGGACATCAACAAAGCTTTGAAG
AATGACCTGAAGCTCCATCCTTATTTTAAGAATTCAAATGAAACTGGGAACTTTACAGAA
GATTTGTCTCTGTCGGTTCAGGATCCTAGCCAATATCTTGATGGTACACGCATTTATATA
CAGGGATCCCTGTGGGATGGCTTTGCAGATGGAAAGGGGAACTTCACTGATGGTCCTTAT
GAAATCCAATATCCTGAAGACTTCTTTAAGGATAGTTTTTACCAATATGGATTTAATCCT
GAGGTTGGTTCAGTGGGAATGCCAGTTGCAGCTACCATCAGAGCAACCATGCCTCCAGAA
GGATGGCAAATTCCGGTGTTTAAACAGGGTTCTGATGGTTACATAGAAGAAGTTCCAAAC
CCCATTTGGAAATACCATAAGTATATTCCTTATTCAAAACCAGGGAAGGTTCATGATCAG
ATTCTACTTTATGGGATCCCAAAAGATCTTGATGATTTTTGTTTGAAGGCTCAACTTGTC
AACTACATTCAGTATAGGGCTCTGTTGGAGGGCTGGAGTTCCCGCATGTGGAGCAAATAC
ACTGGTGTCCTGATTTGGAAGAATCAGAATCCTTGGACAGGTCTCAGAGGTCAGTTTTAT
GATCATCTTCTCGACCAAACAGCAGGATTCTATGGCTGTCGATGTGCTGCAGAACCAATT
CATGTCCAGCTGAATCTGGCTTCATATTTCATAGAAGTCGTTAACACTACATCACAGGAA
CTCTCCGACGTAGCTATAGAAGCATCTGTTTGGGATCTGGATGGAGCATGCCCATACTAC
AAAGTTACTGAGAAGCTTTCTGTGCCGCCAAAGAAAGTAGTGTCCATTGCAGAGATGAAG
TATCCAAAGACCAAAAACCCAAAGCCAGTCTACTTTCTTCTTCTCAAACTTTACAACATG
TCAGATTATGGCATTATATCCAGGAACTTTTATTGGTTGCATCTACCTGGTGGAGATTAC
AAGCTGTTGGAGCCATACAGGAAGAAGAATATCCCCCTCAAGTTAACGTCACAGATTTTT
ATCAAAGGGTCTACTTATGAAGTTGAGATGCAAGTGCACAACAGATCTAAGAAACAGGAC
CCTAAGCGTTTAACATATAAGAATAATTTCACAACTGTACCTGTTGATGGTGATTTTAAT
ATGGCCTCAACAGAACCTGTAAATAGCGCAACTGAGGAAAAACAAGAAGCTGGTTTATTC
AGGAGAATATGCAGACATTTCAAGAAGGACACTGATAGTTTGAAGGTAGCTGAATTGAAT
GGGACTGATTCTGGAGTTGCTTTCTTCCTTCATTTCTCGGTTCGTGGTTGGAGTAAATCT
CACAAGGAAGGAGAAGATACAAGAATTCTTCCTGTGCATTACTCGGACAACTATTTTTCA
CTTGCACCAGGTGAGGTGATGCCCATCAAGATCTCTTTTGAGGTCCCTCACGGTGTCACC
CCAAAAGTAACTCTTCATGGCTGGAATTACCATGTCGGTCAAACTATACTATGA