Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

Cs3g11180.1
CDS Infomation

gene=Cs3g11180
Sequence

ATGGGTTCTTCAGTTCTGTTTCCTGCAACTTCAGTCACTGGTGTTAGTTGGTCTCGGGTT
CAAGAGAAGTGTCGAAGATTCTGTGTACGGGCTTCTTTGGACGCTAATGTTTCTGATATG
AGTGTTAATGCTCCCAAGGGTTTGTTTCCGCCAGAACCGGAACATTATAGAGGACCAAAG
CTGAAAGTGGCTATTATTGGAGCTGGGCTTGCGGGCATGTCAACAGCAGTGGAATTGTTG
GATCAAGGCCATGAGGTGGATATATATGAGTCAAGGTCTTTTATCGGTGGTAAAGTGGGT
TCATTTGTCGATAAGCGTGGAAACCATATTGAAATGGGCCTGCACGTTTTCTTTGGGTGC
TACAATAATCTGTTCCGATTGATGAAAAAGATCGGTGCGGACAAAAATTTACTTGTCAAG
GATCATACTCATACATTTGTAAATAAGGGTGGTGAAATTGGTGAACTTGATTTCCGGTTT
CCGATTGGAGCTCCATTGCATGGGATTCGCGCATTTTTGTCTACAAATCAGCTTAAGACT
TATGATAAAGCAAGAAATGCTCTTGCTCTTGCTCTGAGTCCTGTTGTAAAGGCACTTGTT
GATCCTGATGGAGCCTTGAAGGACATACGAGATTTGGATAGTATAAGCTTCTCTGATTGG
TTTTTGTCCAAGGGTGGAACACGGACGAGTATTCAAAGAATGTGGGATCCTGTTGCTTAT
GCCCTTGGGTTTATTGATTGTGATAACATCAGTGCTCGTTGTATGCTTACTATATTTGCA
CTGTTTGCGACTAAGACCGAGGCTTCCCTATTGCGGATGCTCAAGGGTTCTCCGGATGTT
TATTTGAGTGGGCCCATAAGAAAATATATCACAGATAAAGGGGGCAGGTTCCATCTTAGG
TGGGGGTGCAGAGAGATACTTTATGATAAATCTGCTAGCGGGGAAACATATGTCAGAGGA
CTTGCCATGTCTAAGGCCACTGACAAGAAGGTTGTGCAAGCTGATGCATATGTTGCAGCA
TGTGATGTCCCTGGAATTAAAAGATTGCTTCCATCATCGTGGAGGGAAATGAAAATTTTC
AACAATATTTATGAGCTAGTTGGAGTTCCTGTGGTCACAGTGCAGCTTAGATACAATGGT
TGGGTTACTGAGTTGCAAGACCTAGAACGGTCAAGGCAATTGAGGCAAGCTCTGGGGTTA
GATAACCTTTTGTATACTCCAGATGCAGATTTCTCTTGCTTTGCAGATCTAGCACTCACT
TCACCAGAAGACTACTACAGAGAAGGGCAAGGTTCATTACTCCAATGTGTTTTGACGCCT
GGCGATCCTTACATGCCCTTACCAAATGATGAAATCATAAGGAGAGTGGCAAAGCAGGTT
TTAGCTCTATTTCCATCATCCCAAGGTTTAGAAGTTATTTGGTCATCTGTTGTCAAAATC
GGGCAATCTTTGTACCGTGAGGGACCTGGTAAAGACCCCTTCAGACCTGATCAAAAGACA
CCTGTGAAGAACTTCTTCCTTGCTGGCTCGTATACAAAACAGGATTACATAGATAGTATG
GAAGGAGCAACTTTGTCTGGTAGACAAGCCTCAGCCTACATATGCAATGCCGGGGAAGAA
TTAGTAGCACTGAGGAAGCAGCTTGCTGCCTTTGAATCTCAAGAACAAATGGAAGCTCCA
ACTACTACTAATGATGAACTAAGTCTTGTGTGA

Peptide Sequence

PEP ID

Cs3g11180.1
PEP Infomation
Sequence

MGSSVLFPATSVTGVSWSRVQEKCRRFCVRASLDANVSDMSVNAPKGLFPPEPEHYRGPK
LKVAIIGAGLAGMSTAVELLDQGHEVDIYESRSFIGGKVGSFVDKRGNHIEMGLHVFFGC
YNNLFRLMKKIGADKNLLVKDHTHTFVNKGGEIGELDFRFPIGAPLHGIRAFLSTNQLKT
YDKARNALALALSPVVKALVDPDGALKDIRDLDSISFSDWFLSKGGTRTSIQRMWDPVAY
ALGFIDCDNISARCMLTIFALFATKTEASLLRMLKGSPDVYLSGPIRKYITDKGGRFHLR
WGCREILYDKSASGETYVRGLAMSKATDKKVVQADAYVAACDVPGIKRLLPSSWREMKIF
NNIYELVGVPVVTVQLRYNGWVTELQDLERSRQLRQALGLDNLLYTPDADFSCFADLALT
SPEDYYREGQGSLLQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKI
GQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICNAGEE
LVALRKQLAAFESQEQMEAPTTTNDELSLV*

Transcript Sequence

Transcript ID

Cs3g11180.1
Transcript Infomation

gene=Cs3g11180 CDS=1-1713
Sequence

ATGGGTTCTTCAGTTCTGTTTCCTGCAACTTCAGTCACTGGTGTTAGTTGGTCTCGGGTT
CAAGAGAAGTGTCGAAGATTCTGTGTACGGGCTTCTTTGGACGCTAATGTTTCTGATATG
AGTGTTAATGCTCCCAAGGGTTTGTTTCCGCCAGAACCGGAACATTATAGAGGACCAAAG
CTGAAAGTGGCTATTATTGGAGCTGGGCTTGCGGGCATGTCAACAGCAGTGGAATTGTTG
GATCAAGGCCATGAGGTGGATATATATGAGTCAAGGTCTTTTATCGGTGGTAAAGTGGGT
TCATTTGTCGATAAGCGTGGAAACCATATTGAAATGGGCCTGCACGTTTTCTTTGGGTGC
TACAATAATCTGTTCCGATTGATGAAAAAGATCGGTGCGGACAAAAATTTACTTGTCAAG
GATCATACTCATACATTTGTAAATAAGGGTGGTGAAATTGGTGAACTTGATTTCCGGTTT
CCGATTGGAGCTCCATTGCATGGGATTCGCGCATTTTTGTCTACAAATCAGCTTAAGACT
TATGATAAAGCAAGAAATGCTCTTGCTCTTGCTCTGAGTCCTGTTGTAAAGGCACTTGTT
GATCCTGATGGAGCCTTGAAGGACATACGAGATTTGGATAGTATAAGCTTCTCTGATTGG
TTTTTGTCCAAGGGTGGAACACGGACGAGTATTCAAAGAATGTGGGATCCTGTTGCTTAT
GCCCTTGGGTTTATTGATTGTGATAACATCAGTGCTCGTTGTATGCTTACTATATTTGCA
CTGTTTGCGACTAAGACCGAGGCTTCCCTATTGCGGATGCTCAAGGGTTCTCCGGATGTT
TATTTGAGTGGGCCCATAAGAAAATATATCACAGATAAAGGGGGCAGGTTCCATCTTAGG
TGGGGGTGCAGAGAGATACTTTATGATAAATCTGCTAGCGGGGAAACATATGTCAGAGGA
CTTGCCATGTCTAAGGCCACTGACAAGAAGGTTGTGCAAGCTGATGCATATGTTGCAGCA
TGTGATGTCCCTGGAATTAAAAGATTGCTTCCATCATCGTGGAGGGAAATGAAAATTTTC
AACAATATTTATGAGCTAGTTGGAGTTCCTGTGGTCACAGTGCAGCTTAGATACAATGGT
TGGGTTACTGAGTTGCAAGACCTAGAACGGTCAAGGCAATTGAGGCAAGCTCTGGGGTTA
GATAACCTTTTGTATACTCCAGATGCAGATTTCTCTTGCTTTGCAGATCTAGCACTCACT
TCACCAGAAGACTACTACAGAGAAGGGCAAGGTTCATTACTCCAATGTGTTTTGACGCCT
GGCGATCCTTACATGCCCTTACCAAATGATGAAATCATAAGGAGAGTGGCAAAGCAGGTT
TTAGCTCTATTTCCATCATCCCAAGGTTTAGAAGTTATTTGGTCATCTGTTGTCAAAATC
GGGCAATCTTTGTACCGTGAGGGACCTGGTAAAGACCCCTTCAGACCTGATCAAAAGACA
CCTGTGAAGAACTTCTTCCTTGCTGGCTCGTATACAAAACAGGATTACATAGATAGTATG
GAAGGAGCAACTTTGTCTGGTAGACAAGCCTCAGCCTACATATGCAATGCCGGGGAAGAA
TTAGTAGCACTGAGGAAGCAGCTTGCTGCCTTTGAATCTCAAGAACAAATGGAAGCTCCA
ACTACTACTAATGATGAACTAAGTCTTGTGTGA